RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 PHF8Q9UPP1 1060 aa15.75■□□□□ 0.11
UBP1-211ENST00000490112 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.74■□□□□ 0.11
UBP1-211ENST00000490112 CFAP70Q5T0N1 1121 aa15.74■□□□□ 0.11
UBP1-211ENST00000490112 PRR29P0C7W0 189 aa15.73■□□□□ 0.11
UBP1-211ENST00000490112 HAP1P54257 671 aaPredicted RBP15.73■□□□□ 0.11
UBP1-211ENST00000490112 STAC3Q96MF2 364 aa15.73■□□□□ 0.11
UBP1-211ENST00000490112 POGKQ9P215 609 aa15.73■□□□□ 0.11
UBP1-211ENST00000490112 SBNO1A3KN83 1393 aa15.73■□□□□ 0.11
UBP1-211ENST00000490112 TNS3Q68CZ2 1445 aa15.72■□□□□ 0.11
UBP1-211ENST00000490112 PRAM1Q96QH2 718 aa15.72■□□□□ 0.11
UBP1-211ENST00000490112 SLIT2O94813 1529 aa15.72■□□□□ 0.11
UBP1-211ENST00000490112 DLC1Q96QB1 1528 aa15.72■□□□□ 0.11
UBP1-211ENST00000490112 ARHGEF10O15013 1369 aa15.72■□□□□ 0.11
UBP1-211ENST00000490112 RAB3GAP2Q9H2M9 1393 aa15.71■□□□□ 0.11
UBP1-211ENST00000490112 ANKARQ7Z5J8 1434 aa15.7■□□□□ 0.1
UBP1-211ENST00000490112 USP32Q8NFA0 1604 aa15.7■□□□□ 0.1
UBP1-211ENST00000490112 ZRANB1Q9UGI0 708 aa15.7■□□□□ 0.1
UBP1-211ENST00000490112 EIF3AQ14152 1382 aaKnown RBP15.7■□□□□ 0.1
UBP1-211ENST00000490112 RGPD8O14715 1765 aaPredicted RBP15.7■□□□□ 0.1
UBP1-211ENST00000490112 SAFB2Q14151 953 aaKnown RBP eCLIP15.69■□□□□ 0.1
UBP1-211ENST00000490112 RALGAPBQ86X10 1494 aa15.68■□□□□ 0.1
UBP1-211ENST00000490112 ADGRB2O60241 1585 aa15.67■□□□□ 0.1
UBP1-211ENST00000490112 VPS72Q15906 364 aa15.67■□□□□ 0.1
UBP1-211ENST00000490112 LMOD2Q6P5Q4 547 aa15.67■□□□□ 0.1
UBP1-211ENST00000490112 NWD2Q9ULI1 1742 aa15.66■□□□□ 0.1
UBP1-211ENST00000490112 HRCP23327 699 aa15.66■□□□□ 0.1
UBP1-211ENST00000490112 GPRASP1Q5JY77 1395 aa15.65■□□□□ 0.1
UBP1-211ENST00000490112 TRAK1Q9UPV9 953 aa15.65■□□□□ 0.1
UBP1-211ENST00000490112 ADGRB1O14514 1584 aa15.65■□□□□ 0.1
UBP1-211ENST00000490112 GLI3P10071 1580 aa15.65■□□□□ 0.1
UBP1-211ENST00000490112 BLMP54132 1417 aaPredicted RBP15.64■□□□□ 0.09
UBP1-211ENST00000490112 PMFBP1Q8TBY8 1022 aa15.64■□□□□ 0.09
UBP1-211ENST00000490112 CABLES1Q8TDN4 633 aa15.64■□□□□ 0.09
UBP1-211ENST00000490112 DCAF11Q8TEB1 546 aa15.64■□□□□ 0.09
UBP1-211ENST00000490112 ONECUT3O60422 494 aaPredicted RBP15.63■□□□□ 0.09
UBP1-211ENST00000490112 CCDC9Q9Y3X0 531 aaKnown RBP15.63■□□□□ 0.09
UBP1-211ENST00000490112 WASLO00401 505 aaPredicted RBP15.62■□□□□ 0.09
UBP1-211ENST00000490112 SF3B2Q13435 895 aaKnown RBP15.62■□□□□ 0.09
UBP1-211ENST00000490112 LHX8Q68G74 356 aa15.62■□□□□ 0.09
UBP1-211ENST00000490112 SEPT12Q8IYM1 358 aa15.62■□□□□ 0.09
UBP1-211ENST00000490112 KDM2AQ9Y2K7 1162 aa15.62■□□□□ 0.09
UBP1-211ENST00000490112 PLCH1Q4KWH8 1693 aa15.61■□□□□ 0.09
UBP1-211ENST00000490112 ABCA3Q99758 1704 aa15.61■□□□□ 0.09
UBP1-211ENST00000490112 HIRIP3Q9BW71 556 aaPredicted RBP15.61■□□□□ 0.09
UBP1-211ENST00000490112 TULP4Q9NRJ4 1543 aa15.61■□□□□ 0.09
UBP1-211ENST00000490112 MINK1Q8N4C8 1332 aaPredicted RBP15.61■□□□□ 0.09
UBP1-211ENST00000490112 FAM83GA6ND36 823 aa15.6■□□□□ 0.09
UBP1-211ENST00000490112 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
UBP1-211ENST00000490112 KRT27Q7Z3Y8 459 aa15.59■□□□□ 0.09
UBP1-211ENST00000490112 NGDNQ8NEJ9 315 aaKnown RBP15.59■□□□□ 0.09
UBP1-211ENST00000490112 TRPM3Q9HCF6 1732 aaPredicted RBP15.58■□□□□ 0.08
UBP1-211ENST00000490112 BRWD3Q6RI45 1802 aa15.58■□□□□ 0.08
UBP1-211ENST00000490112 ALS2Q96Q42 1657 aa15.57■□□□□ 0.08
UBP1-211ENST00000490112 BTG4Q9NY30 223 aa15.57■□□□□ 0.08
UBP1-211ENST00000490112 COL14A1Q05707 1796 aaKnown RBP15.57■□□□□ 0.08
UBP1-211ENST00000490112 PRR36Q9H6K5 1346 aa15.56■□□□□ 0.08
UBP1-211ENST00000490112 ITSN1Q15811 1721 aa15.56■□□□□ 0.08
UBP1-211ENST00000490112 A0A0G2JS52 829 aa15.55■□□□□ 0.08
UBP1-211ENST00000490112 PAK3O75914 559 aaPredicted RBP15.55■□□□□ 0.08
UBP1-211ENST00000490112 MYT1Q01538 1121 aa15.55■□□□□ 0.08
UBP1-211ENST00000490112 NUDT16Q96DE0 195 aaKnown RBP15.54■□□□□ 0.08
UBP1-211ENST00000490112 NRAPQ86VF7 1730 aa15.54■□□□□ 0.08
UBP1-211ENST00000490112 FAM98CQ17RN3 349 aaKnown RBP15.53■□□□□ 0.08
UBP1-211ENST00000490112 ARHGEF28Q8N1W1 1705 aaKnown RBP15.53■□□□□ 0.08
UBP1-211ENST00000490112 CD44P16070 742 aaKnown RBP15.52■□□□□ 0.08
UBP1-211ENST00000490112 BAG6P46379 1132 aa15.52■□□□□ 0.08
UBP1-211ENST00000490112 PRDM11Q9NQV5 511 aa15.52■□□□□ 0.08
UBP1-211ENST00000490112 FARP1Q9Y4F1 1045 aaPredicted RBP15.52■□□□□ 0.08
UBP1-211ENST00000490112 ATP7BP35670 1465 aa15.52■□□□□ 0.07
UBP1-211ENST00000490112 SPATA31A5Q5VU36 1347 aa15.51■□□□□ 0.07
UBP1-211ENST00000490112 SPATA31A7Q8IWB4 1347 aa15.51■□□□□ 0.07
UBP1-211ENST00000490112 DEFB132Q7Z7B7 95 aa15.51■□□□□ 0.07
UBP1-211ENST00000490112 KIAA1210Q9ULL0 1709 aa15.51■□□□□ 0.07
UBP1-211ENST00000490112 CDK19Q9BWU1 502 aa15.5■□□□□ 0.07
UBP1-211ENST00000490112 CCDC61Q9Y6R9 512 aa15.5■□□□□ 0.07
UBP1-211ENST00000490112 CRYBG1Q9Y4K1 1723 aa15.49■□□□□ 0.07
UBP1-211ENST00000490112 CLCN6P51797 869 aa15.49■□□□□ 0.07
UBP1-211ENST00000490112 POLR3AO14802 1390 aaPredicted RBP15.49■□□□□ 0.07
UBP1-211ENST00000490112 PLEKHG3A1L390 1219 aa15.47■□□□□ 0.07
UBP1-211ENST00000490112 NBPF8Q3BBV2 869 aa15.47■□□□□ 0.07
UBP1-211ENST00000490112 KIAA0232Q92628 1395 aa15.47■□□□□ 0.07
UBP1-211ENST00000490112 ACEP12821 1306 aa15.46■□□□□ 0.07
UBP1-211ENST00000490112 RGPD1P0DJD0 1748 aa15.46■□□□□ 0.06
UBP1-211ENST00000490112 TOPAZ1Q8N9V7 1692 aa15.44■□□□□ 0.06
UBP1-211ENST00000490112 SPATA31A1Q5TZJ5 1347 aa15.44■□□□□ 0.06
UBP1-211ENST00000490112 PHRF1Q9P1Y6 1649 aaKnown RBP15.44■□□□□ 0.06
UBP1-211ENST00000490112 EVA1CP58658 441 aa15.44■□□□□ 0.06
UBP1-211ENST00000490112 ABTB2Q8N961 1025 aa15.44■□□□□ 0.06
UBP1-211ENST00000490112 BRD4O60885 1362 aaPredicted RBP15.44■□□□□ 0.06
UBP1-211ENST00000490112 THSD7AQ9UPZ6 1657 aa15.44■□□□□ 0.06
UBP1-211ENST00000490112 ZC3H6P61129 1189 aaKnown RBP15.43■□□□□ 0.06
UBP1-211ENST00000490112 FAM196AQ6ZSG2 479 aa15.43■□□□□ 0.06
UBP1-211ENST00000490112 STRN4Q9NRL3 753 aa15.43■□□□□ 0.06
UBP1-211ENST00000490112 POTEIP0CG38 1075 aa15.42■□□□□ 0.06
UBP1-211ENST00000490112 SRPK2P78362 688 aaKnown RBP15.42■□□□□ 0.06
UBP1-211ENST00000490112 CHRNA2Q15822 529 aa15.42■□□□□ 0.06
UBP1-211ENST00000490112 DISP2A7MBM2 1401 aa15.42■□□□□ 0.06
UBP1-211ENST00000490112 CENPJQ9HC77 1338 aaPredicted RBP15.42■□□□□ 0.06
UBP1-211ENST00000490112 CPDO75976 1380 aa15.41■□□□□ 0.06
UBP1-211ENST00000490112 NBPF1Q3BBV0 1214 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms