RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 PXDNQ92626 1479 aa18.32■□□□□ 0.52
TRAIP-210ENST00000489948 ALS2Q96Q42 1657 aa18.31■□□□□ 0.52
TRAIP-210ENST00000489948 CGNL1Q0VF96 1302 aa18.31■□□□□ 0.52
TRAIP-210ENST00000489948 BRINP3Q76B58 766 aa18.31■□□□□ 0.52
TRAIP-210ENST00000489948 NGDNQ8NEJ9 315 aaKnown RBP18.31■□□□□ 0.52
TRAIP-210ENST00000489948 PMFBP1Q8TBY8 1022 aa18.31■□□□□ 0.52
TRAIP-210ENST00000489948 NPHP3Q7Z494 1330 aa18.3■□□□□ 0.52
TRAIP-210ENST00000489948 TTC21AQ8NDW8 1320 aa18.3■□□□□ 0.52
TRAIP-210ENST00000489948 MARF1Q9Y4F3 1742 aaKnown RBP18.29■□□□□ 0.52
TRAIP-210ENST00000489948 PARD3Q8TEW0 1356 aa18.29■□□□□ 0.52
TRAIP-210ENST00000489948 OVOS2A0A0J9YW53 1432 aa18.28■□□□□ 0.52
TRAIP-210ENST00000489948 OVOS2Q6IE36 1432 aa18.28■□□□□ 0.52
TRAIP-210ENST00000489948 SBNO1A3KN83 1393 aa18.28■□□□□ 0.52
TRAIP-210ENST00000489948 TTC21BQ7Z4L5 1316 aa18.27■□□□□ 0.52
TRAIP-210ENST00000489948 TOM1O60784 492 aa18.27■□□□□ 0.52
TRAIP-210ENST00000489948 MED1Q15648 1581 aaPredicted RBP18.26■□□□□ 0.51
TRAIP-210ENST00000489948 USP31Q70CQ4 1352 aa18.26■□□□□ 0.51
TRAIP-210ENST00000489948 TNS3Q68CZ2 1445 aa18.24■□□□□ 0.51
TRAIP-210ENST00000489948 FOXO3O43524 673 aa18.24■□□□□ 0.51
TRAIP-210ENST00000489948 PRKRIP1Q9H875 184 aaPredicted RBP18.24■□□□□ 0.51
TRAIP-210ENST00000489948 SOS2Q07890 1332 aaPredicted RBP18.23■□□□□ 0.51
TRAIP-210ENST00000489948 CRYBG1Q9Y4K1 1723 aa18.23■□□□□ 0.51
TRAIP-210ENST00000489948 ANP32CO43423 234 aa18.23■□□□□ 0.51
TRAIP-210ENST00000489948 COL16A1Q07092 1604 aaPredicted RBP18.23■□□□□ 0.51
TRAIP-210ENST00000489948 FYB1O15117 783 aa18.22■□□□□ 0.51
TRAIP-210ENST00000489948 PSME1Q06323 249 aa18.22■□□□□ 0.51
TRAIP-210ENST00000489948 RALBP1Q15311 655 aa18.22■□□□□ 0.51
TRAIP-210ENST00000489948 PHLPP1O60346 1717 aa18.22■□□□□ 0.51
TRAIP-210ENST00000489948 SLIT3O75094 1523 aa18.22■□□□□ 0.51
TRAIP-210ENST00000489948 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
TRAIP-210ENST00000489948 KRT28Q7Z3Y7 464 aa18.21■□□□□ 0.51
TRAIP-210ENST00000489948 PHRF1Q9P1Y6 1649 aaKnown RBP18.2■□□□□ 0.5
TRAIP-210ENST00000489948 COL22A1Q8NFW1 1626 aaPredicted RBP18.2■□□□□ 0.5
TRAIP-210ENST00000489948 ARHGEF10O15013 1369 aa18.19■□□□□ 0.5
TRAIP-210ENST00000489948 UBAP1LF5GYI3 381 aa18.19■□□□□ 0.5
TRAIP-210ENST00000489948 NME9Q86XW9 330 aa18.19■□□□□ 0.5
TRAIP-210ENST00000489948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.19■□□□□ 0.5
TRAIP-210ENST00000489948 ABCA3Q99758 1704 aa18.19■□□□□ 0.5
TRAIP-210ENST00000489948 SMG6Q86US8 1419 aaKnown RBP18.18■□□□□ 0.5
TRAIP-210ENST00000489948 CC2D1BQ5T0F9 858 aaKnown RBP18.18■□□□□ 0.5
TRAIP-210ENST00000489948 SPATA31A3Q5VYP0 1347 aa18.18■□□□□ 0.5
TRAIP-210ENST00000489948 NFAT5O94916 1531 aa18.17■□□□□ 0.5
TRAIP-210ENST00000489948 USP19O94966 1318 aa18.17■□□□□ 0.5
TRAIP-210ENST00000489948 MYBBP1AQ9BQG0 1328 aaKnown RBP18.17■□□□□ 0.5
TRAIP-210ENST00000489948 AATKQ6ZMQ8 1374 aa18.17■□□□□ 0.5
TRAIP-210ENST00000489948 COG3Q96JB2 828 aa18.16■□□□□ 0.5
TRAIP-210ENST00000489948 GGNBP2Q9H3C7 697 aa18.16■□□□□ 0.5
TRAIP-210ENST00000489948 DDX17Q92841 729 aaKnown RBP18.15■□□□□ 0.5
TRAIP-210ENST00000489948 XPCQ01831 940 aaPredicted RBP18.14■□□□□ 0.49
TRAIP-210ENST00000489948 MORC1Q86VD1 984 aa18.14■□□□□ 0.49
TRAIP-210ENST00000489948 ABTB2Q8N961 1025 aa18.14■□□□□ 0.49
TRAIP-210ENST00000489948 SHPRHQ149N8 1683 aa18.14■□□□□ 0.49
TRAIP-210ENST00000489948 PAK3O75914 559 aaPredicted RBP18.13■□□□□ 0.49
TRAIP-210ENST00000489948 ABCC6O95255 1503 aa18.13■□□□□ 0.49
TRAIP-210ENST00000489948 MAP2P11137 1827 aaKnown RBP18.12■□□□□ 0.49
TRAIP-210ENST00000489948 LTN1O94822 1766 aa18.12■□□□□ 0.49
TRAIP-210ENST00000489948 CCER2I3L3R5 266 aa18.11■□□□□ 0.49
TRAIP-210ENST00000489948 NLRP6P59044 892 aa18.11■□□□□ 0.49
TRAIP-210ENST00000489948 NLRP13Q86W25 1043 aa18.11■□□□□ 0.49
TRAIP-210ENST00000489948 ZRANB1Q9UGI0 708 aa18.11■□□□□ 0.49
TRAIP-210ENST00000489948 CDK12Q9NYV4 1490 aaPredicted RBP18.11■□□□□ 0.49
TRAIP-210ENST00000489948 KIF24Q5T7B8 1368 aa18.1■□□□□ 0.49
TRAIP-210ENST00000489948 PPP2R1AP30153 589 aa18.1■□□□□ 0.49
TRAIP-210ENST00000489948 PIP4K2BP78356 416 aa18.1■□□□□ 0.49
TRAIP-210ENST00000489948 MIER1Q8N108 512 aa18.1■□□□□ 0.49
TRAIP-210ENST00000489948 LRRC59Q96AG4 307 aaKnown RBP18.09■□□□□ 0.49
TRAIP-210ENST00000489948 PNPLA6Q8IY17 1366 aa18.08■□□□□ 0.49
TRAIP-210ENST00000489948 KCNH5Q8NCM2 988 aa18.08■□□□□ 0.48
TRAIP-210ENST00000489948 PEAK1Q9H792 1746 aa18.08■□□□□ 0.48
TRAIP-210ENST00000489948 RTL1A6NKG5 1358 aa18.07■□□□□ 0.48
TRAIP-210ENST00000489948 COL3A1P02461 1466 aaPredicted RBP18.07■□□□□ 0.48
TRAIP-210ENST00000489948 INSRP06213 1382 aa18.06■□□□□ 0.48
TRAIP-210ENST00000489948 CNGB1Q14028 1251 aaPredicted RBP18.05■□□□□ 0.48
TRAIP-210ENST00000489948 CPDO75976 1380 aa18.04■□□□□ 0.48
TRAIP-210ENST00000489948 NUTM2GQ5VZR2 741 aa18.03■□□□□ 0.48
TRAIP-210ENST00000489948 LMOD2Q6P5Q4 547 aa18.03■□□□□ 0.48
TRAIP-210ENST00000489948 FLT4P35916 1363 aa18.03■□□□□ 0.48
TRAIP-210ENST00000489948 COL18A1P39060 1754 aa18.02■□□□□ 0.48
TRAIP-210ENST00000489948 GCP02774 474 aa18.02■□□□□ 0.48
TRAIP-210ENST00000489948 TNNT2P45379 298 aaPredicted RBP18.02■□□□□ 0.48
TRAIP-210ENST00000489948 POLKQ9UBT6 870 aa18.02■□□□□ 0.48
TRAIP-210ENST00000489948 LMO7Q8WWI1 1683 aa18.02■□□□□ 0.47
TRAIP-210ENST00000489948 JCADQ9P266 1359 aa18.02■□□□□ 0.47
TRAIP-210ENST00000489948 MAP3K19Q56UN5 1328 aa18■□□□□ 0.47
TRAIP-210ENST00000489948 MTHFSP49914 203 aa18■□□□□ 0.47
TRAIP-210ENST00000489948 FAM208AQ9UK61 1670 aaKnown RBP17.99■□□□□ 0.47
TRAIP-210ENST00000489948 BLMP54132 1417 aaPredicted RBP17.99■□□□□ 0.47
TRAIP-210ENST00000489948 RGPD1P0DJD0 1748 aa17.99■□□□□ 0.47
TRAIP-210ENST00000489948 ARHGEF25Q86VW2 580 aa17.99■□□□□ 0.47
TRAIP-210ENST00000489948 EMILIN1Q9Y6C2 1016 aa17.99■□□□□ 0.47
TRAIP-210ENST00000489948 COL14A1Q05707 1796 aaKnown RBP17.99■□□□□ 0.47
TRAIP-210ENST00000489948 RRS1Q15050 365 aaKnown RBP17.98■□□□□ 0.47
TRAIP-210ENST00000489948 MRS2Q9HD23 443 aa17.98■□□□□ 0.47
TRAIP-210ENST00000489948 CAMTA1Q9Y6Y1 1673 aa17.97■□□□□ 0.47
TRAIP-210ENST00000489948 CFAP53Q96M91 514 aa17.97■□□□□ 0.47
TRAIP-210ENST00000489948 KIAA0232Q92628 1395 aa17.95■□□□□ 0.46
TRAIP-210ENST00000489948 FBLN1P23142 703 aa17.95■□□□□ 0.46
TRAIP-210ENST00000489948 CCDC184Q52MB2 194 aa17.95■□□□□ 0.46
TRAIP-210ENST00000489948 SPATA31A6Q5VVP1 1343 aa17.95■□□□□ 0.46
TRAIP-210ENST00000489948 RGPD5Q99666 1765 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms