RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 GRIN3BO60391 1043 aa12.5□□□□□ -0.41
EXOSC3-206ENST00000489414 HSPA1AP0DMV8 641 aaKnown RBP12.5□□□□□ -0.41
EXOSC3-206ENST00000489414 HSPA1BP0DMV9 641 aaKnown RBP12.5□□□□□ -0.41
EXOSC3-206ENST00000489414 HTRA3P83110 453 aa12.5□□□□□ -0.41
EXOSC3-206ENST00000489414 YBX3P16989 372 aaKnown RBP eCLIP12.49□□□□□ -0.41
EXOSC3-206ENST00000489414 METP08581 1390 aa12.48□□□□□ -0.41
EXOSC3-206ENST00000489414 LRPPRCP42704 1394 aaKnown RBP12.48□□□□□ -0.41
EXOSC3-206ENST00000489414 CHGAP10645 457 aaKnown RBP12.47□□□□□ -0.41
EXOSC3-206ENST00000489414 HAP1P54257 671 aaPredicted RBP12.47□□□□□ -0.41
EXOSC3-206ENST00000489414 ESCO1Q5FWF5 840 aa12.47□□□□□ -0.41
EXOSC3-206ENST00000489414 TOMM70O94826 608 aa12.46□□□□□ -0.41
EXOSC3-206ENST00000489414 CABLES1Q8TDN4 633 aa12.46□□□□□ -0.41
EXOSC3-206ENST00000489414 BTG4Q9NY30 223 aa12.46□□□□□ -0.41
EXOSC3-206ENST00000489414 ERBINQ96RT1 1412 aa12.45□□□□□ -0.42
EXOSC3-206ENST00000489414 RRBP1Q9P2E9 1410 aaKnown RBP12.45□□□□□ -0.42
EXOSC3-206ENST00000489414 KANK1Q14678 1352 aa12.45□□□□□ -0.42
EXOSC3-206ENST00000489414 PLSCR1O15162 318 aa12.45□□□□□ -0.42
EXOSC3-206ENST00000489414 MLLT1Q03111 559 aaPredicted RBP12.45□□□□□ -0.42
EXOSC3-206ENST00000489414 U3KPZ7 1027 aaPredicted RBP12.44□□□□□ -0.42
EXOSC3-206ENST00000489414 COL14A1Q05707 1796 aaKnown RBP12.43□□□□□ -0.42
EXOSC3-206ENST00000489414 BCL11BQ9C0K0 894 aaPredicted RBP12.43□□□□□ -0.42
EXOSC3-206ENST00000489414 EEA1Q15075 1411 aa12.43□□□□□ -0.42
EXOSC3-206ENST00000489414 NLGN2Q8NFZ4 835 aa12.42□□□□□ -0.42
EXOSC3-206ENST00000489414 ARHGEF28Q8N1W1 1705 aaKnown RBP12.42□□□□□ -0.42
EXOSC3-206ENST00000489414 CCDC144AA2RUR9 1427 aa12.41□□□□□ -0.42
EXOSC3-206ENST00000489414 CEP162Q5TB80 1403 aa12.41□□□□□ -0.42
EXOSC3-206ENST00000489414 PDE4DIPQ5VU43 2346 aa12.41□□□□□ -0.42
EXOSC3-206ENST00000489414 TNS3Q68CZ2 1445 aa12.41□□□□□ -0.42
EXOSC3-206ENST00000489414 USP19O94966 1318 aa12.4□□□□□ -0.42
EXOSC3-206ENST00000489414 CDC42BPGQ6DT37 1551 aa12.4□□□□□ -0.42
EXOSC3-206ENST00000489414 SLC15A2Q16348 729 aa12.4□□□□□ -0.42
EXOSC3-206ENST00000489414 PROM2Q8N271 834 aa12.4□□□□□ -0.42
EXOSC3-206ENST00000489414 TNRC18O15417 2968 aaPredicted RBP12.39□□□□□ -0.43
EXOSC3-206ENST00000489414 SPATA31A1Q5TZJ5 1347 aa12.39□□□□□ -0.43
EXOSC3-206ENST00000489414 RGS19P49795 217 aa12.39□□□□□ -0.43
EXOSC3-206ENST00000489414 KLHL34Q8N239 644 aa12.39□□□□□ -0.43
EXOSC3-206ENST00000489414 STK32BQ9NY57 414 aa12.39□□□□□ -0.43
EXOSC3-206ENST00000489414 COL24A1Q17RW2 1714 aa12.38□□□□□ -0.43
EXOSC3-206ENST00000489414 PDE3BQ13370 1112 aa12.38□□□□□ -0.43
EXOSC3-206ENST00000489414 SPINK5Q9NQ38 1064 aaPredicted RBP12.38□□□□□ -0.43
EXOSC3-206ENST00000489414 SBF2Q86WG5 1849 aa12.38□□□□□ -0.43
EXOSC3-206ENST00000489414 ROBO2Q9HCK4 1378 aa12.38□□□□□ -0.43
EXOSC3-206ENST00000489414 TULP4Q9NRJ4 1543 aa12.37□□□□□ -0.43
EXOSC3-206ENST00000489414 KIF1AQ12756 1690 aa12.36□□□□□ -0.43
EXOSC3-206ENST00000489414 KIF15Q9NS87 1388 aa12.36□□□□□ -0.43
EXOSC3-206ENST00000489414 DSG3P32926 999 aa12.36□□□□□ -0.43
EXOSC3-206ENST00000489414 PEAK1Q9H792 1746 aa12.35□□□□□ -0.43
EXOSC3-206ENST00000489414 IQGAP3Q86VI3 1631 aa12.35□□□□□ -0.43
EXOSC3-206ENST00000489414 PRAG1Q86YV5 1406 aa12.35□□□□□ -0.43
EXOSC3-206ENST00000489414 PLEKHG5O94827 1062 aa12.34□□□□□ -0.43
EXOSC3-206ENST00000489414 POTEHQ6S545 545 aa12.34□□□□□ -0.43
EXOSC3-206ENST00000489414 RBM46Q8TBY0 533 aaKnown RBP12.34□□□□□ -0.43
EXOSC3-206ENST00000489414 KRT28Q7Z3Y7 464 aa12.33□□□□□ -0.44
EXOSC3-206ENST00000489414 TECPR2O15040 1411 aa12.33□□□□□ -0.44
EXOSC3-206ENST00000489414 DHX57Q6P158 1386 aaKnown RBP12.32□□□□□ -0.44
EXOSC3-206ENST00000489414 C11orf95C9JLR9 678 aaPredicted RBP12.32□□□□□ -0.44
EXOSC3-206ENST00000489414 UBTFP17480 764 aaKnown RBP12.32□□□□□ -0.44
EXOSC3-206ENST00000489414 ABHD8Q96I13 439 aa12.32□□□□□ -0.44
EXOSC3-206ENST00000489414 TOPAZ1Q8N9V7 1692 aa12.32□□□□□ -0.44
EXOSC3-206ENST00000489414 ARHGEF10O15013 1369 aa12.31□□□□□ -0.44
EXOSC3-206ENST00000489414 HFM1A2PYH4 1435 aa12.31□□□□□ -0.44
EXOSC3-206ENST00000489414 BARGINQ6ZT62 677 aa12.31□□□□□ -0.44
EXOSC3-206ENST00000489414 PRDM10Q9NQV6 1147 aa12.31□□□□□ -0.44
EXOSC3-206ENST00000489414 FSTL1Q12841 308 aa12.3□□□□□ -0.44
EXOSC3-206ENST00000489414 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
EXOSC3-206ENST00000489414 PAPPAQ13219 1627 aa12.29□□□□□ -0.44
EXOSC3-206ENST00000489414 OVOS2A0A0G2JMS6 1433 aa12.28□□□□□ -0.44
EXOSC3-206ENST00000489414 OVOS2A0A0J9YW53 1432 aa12.28□□□□□ -0.44
EXOSC3-206ENST00000489414 OVOS2Q6IE36 1432 aa12.28□□□□□ -0.44
EXOSC3-206ENST00000489414 PARP4Q9UKK3 1724 aaKnown RBP12.28□□□□□ -0.44
EXOSC3-206ENST00000489414 POLD1P28340 1107 aa12.28□□□□□ -0.44
EXOSC3-206ENST00000489414 TXNRD1Q16881 649 aa12.28□□□□□ -0.44
EXOSC3-206ENST00000489414 PTF1AQ7RTS3 328 aa12.28□□□□□ -0.44
EXOSC3-206ENST00000489414 PSME1Q06323 249 aa12.25□□□□□ -0.45
EXOSC3-206ENST00000489414 NMRK2Q9NPI5 230 aa12.25□□□□□ -0.45
EXOSC3-206ENST00000489414 RRP7BPQ9NSQ0 103 aa12.25□□□□□ -0.45
EXOSC3-206ENST00000489414 NUTM2FA1L443 756 aa12.24□□□□□ -0.45
EXOSC3-206ENST00000489414 LMOD2Q6P5Q4 547 aa12.24□□□□□ -0.45
EXOSC3-206ENST00000489414 USP35Q9P2H5 1018 aa12.24□□□□□ -0.45
EXOSC3-206ENST00000489414 CRYBG1Q9Y4K1 1723 aa12.24□□□□□ -0.45
EXOSC3-206ENST00000489414 ATP7BP35670 1465 aa12.23□□□□□ -0.45
EXOSC3-206ENST00000489414 NAIPQ13075 1403 aa12.23□□□□□ -0.45
EXOSC3-206ENST00000489414 FOXN1O15353 648 aa12.23□□□□□ -0.45
EXOSC3-206ENST00000489414 QSER1Q2KHR3 1735 aa12.23□□□□□ -0.45
EXOSC3-206ENST00000489414 FMN2Q9NZ56 1722 aa12.23□□□□□ -0.45
EXOSC3-206ENST00000489414 SLC16A10Q8TF71 515 aa12.22□□□□□ -0.45
EXOSC3-206ENST00000489414 PHRF1Q9P1Y6 1649 aaKnown RBP12.2□□□□□ -0.46
EXOSC3-206ENST00000489414 PMFBP1Q8TBY8 1022 aa12.2□□□□□ -0.46
EXOSC3-206ENST00000489414 PRDM11Q9NQV5 511 aa12.2□□□□□ -0.46
EXOSC3-206ENST00000489414 STRN4Q9NRL3 753 aa12.2□□□□□ -0.46
EXOSC3-206ENST00000489414 ALS2Q96Q42 1657 aa12.19□□□□□ -0.46
EXOSC3-206ENST00000489414 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
EXOSC3-206ENST00000489414 CCDC85CA6NKD9 419 aa12.19□□□□□ -0.46
EXOSC3-206ENST00000489414 SSH2Q76I76 1423 aa12.19□□□□□ -0.46
EXOSC3-206ENST00000489414 TRPM3Q9HCF6 1732 aaPredicted RBP12.18□□□□□ -0.46
EXOSC3-206ENST00000489414 ZNF827Q17R98 1081 aa12.18□□□□□ -0.46
EXOSC3-206ENST00000489414 C16orf71Q8IYS4 520 aaPredicted RBP12.18□□□□□ -0.46
EXOSC3-206ENST00000489414 TCP11L2Q8N4U5 519 aa12.18□□□□□ -0.46
EXOSC3-206ENST00000489414 NRXN1Q9ULB1 1477 aa12.18□□□□□ -0.46
EXOSC3-206ENST00000489414 BCL9O00512 1426 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms