RNA–Protein interactions for RNA: ENST00000489365.1

PRDM1-207, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 649 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-207ENST00000489365 HAP1P54257 671 aaPredicted RBP7.37□□□□□ -1.23
PRDM1-207ENST00000489365 PPLO60437 1756 aa7.37□□□□□ -1.23
PRDM1-207ENST00000489365 PRAG1Q86YV5 1406 aa7.36□□□□□ -1.23
PRDM1-207ENST00000489365 DHX57Q6P158 1386 aaKnown RBP7.36□□□□□ -1.23
PRDM1-207ENST00000489365 SETD1AO15047 1707 aaKnown RBP7.36□□□□□ -1.23
PRDM1-207ENST00000489365 NALCNQ8IZF0 1738 aa7.36□□□□□ -1.23
PRDM1-207ENST00000489365 AFF2P51816 1311 aa7.36□□□□□ -1.23
PRDM1-207ENST00000489365 STK25O00506 426 aa7.36□□□□□ -1.23
PRDM1-207ENST00000489365 ADAMTS2O95450 1211 aa7.36□□□□□ -1.23
PRDM1-207ENST00000489365 TRPC6Q9Y210 931 aa7.36□□□□□ -1.23
PRDM1-207ENST00000489365 NHSL1Q5SYE7 1610 aa7.36□□□□□ -1.23
PRDM1-207ENST00000489365 LRP6O75581 1613 aa7.35□□□□□ -1.23
PRDM1-207ENST00000489365 ADGRF5Q8IZF2 1346 aa7.35□□□□□ -1.23
PRDM1-207ENST00000489365 RBM6P78332 1123 aaKnown RBP7.35□□□□□ -1.23
PRDM1-207ENST00000489365 BCL11BQ9C0K0 894 aaPredicted RBP7.35□□□□□ -1.23
PRDM1-207ENST00000489365 POGKQ9P215 609 aa7.35□□□□□ -1.23
PRDM1-207ENST00000489365 EIF3AQ14152 1382 aaKnown RBP7.34□□□□□ -1.23
PRDM1-207ENST00000489365 PNPLA6Q8IY17 1366 aa7.34□□□□□ -1.23
PRDM1-207ENST00000489365 ABCC11Q96J66 1382 aa7.34□□□□□ -1.23
PRDM1-207ENST00000489365 CDC42BPGQ6DT37 1551 aa7.34□□□□□ -1.23
PRDM1-207ENST00000489365 PSME1Q06323 249 aa7.34□□□□□ -1.23
PRDM1-207ENST00000489365 BBXQ8WY36 941 aaPredicted RBP7.34□□□□□ -1.23
PRDM1-207ENST00000489365 DDX17Q92841 729 aaKnown RBP7.34□□□□□ -1.23
PRDM1-207ENST00000489365 STAC3Q96MF2 364 aa7.34□□□□□ -1.23
PRDM1-207ENST00000489365 ORAI2Q96SN7 254 aa7.34□□□□□ -1.23
PRDM1-207ENST00000489365 QTRT2Q9H974 415 aaKnown RBP7.34□□□□□ -1.23
PRDM1-207ENST00000489365 USP21Q9UK80 565 aa7.34□□□□□ -1.23
PRDM1-207ENST00000489365 TRPC5Q9UL62 973 aaPredicted RBP7.34□□□□□ -1.23
PRDM1-207ENST00000489365 CDK12Q9NYV4 1490 aaPredicted RBP7.34□□□□□ -1.23
PRDM1-207ENST00000489365 SPATA31E1Q6ZUB1 1445 aa7.34□□□□□ -1.23
PRDM1-207ENST00000489365 LAMC1P11047 1609 aa7.34□□□□□ -1.24
PRDM1-207ENST00000489365 SOS2Q07890 1332 aaPredicted RBP7.33□□□□□ -1.24
PRDM1-207ENST00000489365 FOXO3O43524 673 aa7.33□□□□□ -1.24
PRDM1-207ENST00000489365 TMEM132EQ6IEE7 984 aa7.33□□□□□ -1.24
PRDM1-207ENST00000489365 STK24Q9Y6E0 443 aa7.33□□□□□ -1.24
PRDM1-207ENST00000489365 TECPR2O15040 1411 aa7.33□□□□□ -1.24
PRDM1-207ENST00000489365 PIK3C2GO75747 1445 aa7.33□□□□□ -1.24
PRDM1-207ENST00000489365 YTHDC2Q9H6S0 1430 aaKnown RBP7.33□□□□□ -1.24
PRDM1-207ENST00000489365 RAB3GAP2Q9H2M9 1393 aa7.33□□□□□ -1.24
PRDM1-207ENST00000489365 MYOM2P54296 1465 aa7.32□□□□□ -1.24
PRDM1-207ENST00000489365 NUTM2FA1L443 756 aa7.32□□□□□ -1.24
PRDM1-207ENST00000489365 TIE1P35590 1138 aa7.32□□□□□ -1.24
PRDM1-207ENST00000489365 WAPLQ7Z5K2 1190 aa7.32□□□□□ -1.24
PRDM1-207ENST00000489365 SIRT1Q96EB6 747 aa7.32□□□□□ -1.24
PRDM1-207ENST00000489365 C14orf93Q9H972 538 aaKnown RBP7.32□□□□□ -1.24
PRDM1-207ENST00000489365 ATAD2Q6PL18 1390 aa7.32□□□□□ -1.24
PRDM1-207ENST00000489365 LMOD2Q6P5Q4 547 aa7.31□□□□□ -1.24
PRDM1-207ENST00000489365 TMEM106CQ9BVX2 250 aa7.31□□□□□ -1.24
PRDM1-207ENST00000489365 KIF1AQ12756 1690 aa7.31□□□□□ -1.24
PRDM1-207ENST00000489365 KNDC1Q76NI1 1749 aa7.3□□□□□ -1.24
PRDM1-207ENST00000489365 HRCP23327 699 aa7.3□□□□□ -1.24
PRDM1-207ENST00000489365 XPCQ01831 940 aaPredicted RBP7.3□□□□□ -1.24
PRDM1-207ENST00000489365 SAFB2Q14151 953 aaKnown RBP eCLIP7.3□□□□□ -1.24
PRDM1-207ENST00000489365 CFAP70Q5T0N1 1121 aa7.3□□□□□ -1.24
PRDM1-207ENST00000489365 DCAF11Q8TEB1 546 aa7.3□□□□□ -1.24
PRDM1-207ENST00000489365 PRAM1Q96QH2 718 aa7.3□□□□□ -1.24
PRDM1-207ENST00000489365 BMP2KQ9NSY1 1161 aaPredicted RBP7.3□□□□□ -1.24
PRDM1-207ENST00000489365 PHF8Q9UPP1 1060 aa7.3□□□□□ -1.24
PRDM1-207ENST00000489365 KDM2AQ9Y2K7 1162 aa7.3□□□□□ -1.24
PRDM1-207ENST00000489365 ARHGEF10O15013 1369 aa7.3□□□□□ -1.24
PRDM1-207ENST00000489365 GPRASP1Q5JY77 1395 aa7.3□□□□□ -1.24
PRDM1-207ENST00000489365 IFT172Q9UG01 1749 aa7.3□□□□□ -1.24
PRDM1-207ENST00000489365 TTLL13PA6NNM8 815 aa7.29□□□□□ -1.24
PRDM1-207ENST00000489365 NKX1-1Q15270 411 aaPredicted RBP7.29□□□□□ -1.24
PRDM1-207ENST00000489365 KRT28Q7Z3Y7 464 aa7.29□□□□□ -1.24
PRDM1-207ENST00000489365 FNBP4Q8N3X1 1017 aaPredicted RBP7.29□□□□□ -1.24
PRDM1-207ENST00000489365 UPF1Q92900 1129 aaKnown RBP eCLIP7.29□□□□□ -1.24
PRDM1-207ENST00000489365 CCDC9Q9Y3X0 531 aaKnown RBP7.29□□□□□ -1.24
PRDM1-207ENST00000489365 SF3B2Q13435 895 aaKnown RBP7.28□□□□□ -1.24
PRDM1-207ENST00000489365 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.28□□□□□ -1.24
PRDM1-207ENST00000489365 TRAK1Q9UPV9 953 aa7.28□□□□□ -1.24
PRDM1-207ENST00000489365 SPATA31A3Q5VYP0 1347 aa7.27□□□□□ -1.24
PRDM1-207ENST00000489365 RGS12O14924 1447 aa7.27□□□□□ -1.24
PRDM1-207ENST00000489365 ANKARQ7Z5J8 1434 aa7.27□□□□□ -1.24
PRDM1-207ENST00000489365 COL22A1Q8NFW1 1626 aaPredicted RBP7.27□□□□□ -1.25
PRDM1-207ENST00000489365 A0A0G2JS52 829 aa7.27□□□□□ -1.25
PRDM1-207ENST00000489365 MYT1Q01538 1121 aa7.27□□□□□ -1.25
PRDM1-207ENST00000489365 CCDC125Q86Z20 511 aa7.27□□□□□ -1.25
PRDM1-207ENST00000489365 NGDNQ8NEJ9 315 aaKnown RBP7.27□□□□□ -1.25
PRDM1-207ENST00000489365 CABP2Q9NPB3 220 aa7.27□□□□□ -1.25
PRDM1-207ENST00000489365 SBNO1A3KN83 1393 aa7.27□□□□□ -1.25
PRDM1-207ENST00000489365 PLEKHH1Q9ULM0 1364 aa7.27□□□□□ -1.25
PRDM1-207ENST00000489365 PXDNQ92626 1479 aa7.27□□□□□ -1.25
PRDM1-207ENST00000489365 NRXN1Q9ULB1 1477 aa7.27□□□□□ -1.25
PRDM1-207ENST00000489365 FMN2Q9NZ56 1722 aa7.27□□□□□ -1.25
PRDM1-207ENST00000489365 DLC1Q96QB1 1528 aa7.27□□□□□ -1.25
PRDM1-207ENST00000489365 TNS3Q68CZ2 1445 aa7.27□□□□□ -1.25
PRDM1-207ENST00000489365 ATMINO43313 823 aaPredicted RBP7.26□□□□□ -1.25
PRDM1-207ENST00000489365 ASTLQ6HA08 431 aaPredicted RBP7.26□□□□□ -1.25
PRDM1-207ENST00000489365 UNC5CLQ8IV45 518 aa7.26□□□□□ -1.25
PRDM1-207ENST00000489365 GJD4Q96KN9 370 aaPredicted RBP7.26□□□□□ -1.25
PRDM1-207ENST00000489365 MINK1Q8N4C8 1332 aaPredicted RBP7.26□□□□□ -1.25
PRDM1-207ENST00000489365 PLCB2Q00722 1185 aa7.25□□□□□ -1.25
PRDM1-207ENST00000489365 EFCAB3Q8N7B9 438 aa7.25□□□□□ -1.25
PRDM1-207ENST00000489365 PMFBP1Q8TBY8 1022 aa7.25□□□□□ -1.25
PRDM1-207ENST00000489365 OTUD5Q96G74 571 aa7.25□□□□□ -1.25
PRDM1-207ENST00000489365 HIRIP3Q9BW71 556 aaPredicted RBP7.25□□□□□ -1.25
PRDM1-207ENST00000489365 ATRNO75882 1429 aa7.25□□□□□ -1.25
PRDM1-207ENST00000489365 WASLO00401 505 aaPredicted RBP7.24□□□□□ -1.25
PRDM1-207ENST00000489365 ATN1P54259 1190 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms