RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-231ENST00000489261 C19orf44Q9H6X5 657 aa14.31□□□□□ -0.12
ITSN1-231ENST00000489261 CABP1Q9NZU7 370 aa14.31□□□□□ -0.12
ITSN1-231ENST00000489261 COL16A1Q07092 1604 aaPredicted RBP14.3□□□□□ -0.12
ITSN1-231ENST00000489261 AHDC1Q5TGY3 1603 aaPredicted RBP14.3□□□□□ -0.12
ITSN1-231ENST00000489261 SLAIN2Q9P270 581 aa14.3□□□□□ -0.12
ITSN1-231ENST00000489261 RCAN3Q9UKA8 241 aa14.3□□□□□ -0.12
ITSN1-231ENST00000489261 ADGRL3Q9HAR2 1447 aa14.3□□□□□ -0.12
ITSN1-231ENST00000489261 FYB1O15117 783 aa14.29□□□□□ -0.12
ITSN1-231ENST00000489261 MTHFSP49914 203 aa14.29□□□□□ -0.12
ITSN1-231ENST00000489261 GOLGA2Q08379 1002 aa14.29□□□□□ -0.12
ITSN1-231ENST00000489261 CADPS2Q86UW7 1296 aa14.29□□□□□ -0.12
ITSN1-231ENST00000489261 CCDC61Q9Y6R9 512 aa14.29□□□□□ -0.12
ITSN1-231ENST00000489261 ZNF521Q96K83 1311 aa14.29□□□□□ -0.12
ITSN1-231ENST00000489261 PLEKHH1Q9ULM0 1364 aa14.29□□□□□ -0.12
ITSN1-231ENST00000489261 NHSL1Q5SYE7 1610 aa14.28□□□□□ -0.12
ITSN1-231ENST00000489261 RUNDC1Q96C34 613 aa14.28□□□□□ -0.12
ITSN1-231ENST00000489261 CD163L1Q9NR16 1453 aa14.28□□□□□ -0.12
ITSN1-231ENST00000489261 MST1RQ04912 1400 aa14.27□□□□□ -0.12
ITSN1-231ENST00000489261 ROBO2Q9HCK4 1378 aa14.27□□□□□ -0.12
ITSN1-231ENST00000489261 C14orf37Q86TY3 774 aa14.27□□□□□ -0.13
ITSN1-231ENST00000489261 NUDT16Q96DE0 195 aaKnown RBP14.27□□□□□ -0.13
ITSN1-231ENST00000489261 PNNQ9H307 717 aaKnown RBP14.27□□□□□ -0.13
ITSN1-231ENST00000489261 SALL2Q9Y467 1007 aaPredicted RBP14.27□□□□□ -0.13
ITSN1-231ENST00000489261 CPSF1Q10570 1443 aaKnown RBP14.25□□□□□ -0.13
ITSN1-231ENST00000489261 ATF3P18847 181 aa14.25□□□□□ -0.13
ITSN1-231ENST00000489261 TRMT2AQ8IZ69 625 aaKnown RBP14.25□□□□□ -0.13
ITSN1-231ENST00000489261 SHPRHQ149N8 1683 aa14.25□□□□□ -0.13
ITSN1-231ENST00000489261 EDC4Q6P2E9 1401 aaKnown RBP14.24□□□□□ -0.13
ITSN1-231ENST00000489261 E9PSI1 815 aa14.24□□□□□ -0.13
ITSN1-231ENST00000489261 APAF1O14727 1248 aa14.24□□□□□ -0.13
ITSN1-231ENST00000489261 RRP1P56182 461 aaKnown RBP14.24□□□□□ -0.13
ITSN1-231ENST00000489261 SLFN5Q08AF3 891 aa14.24□□□□□ -0.13
ITSN1-231ENST00000489261 CCDC27Q2M243 656 aa14.24□□□□□ -0.13
ITSN1-231ENST00000489261 CDCA7LQ96GN5 454 aa14.24□□□□□ -0.13
ITSN1-231ENST00000489261 GGNBP2Q9H3C7 697 aa14.24□□□□□ -0.13
ITSN1-231ENST00000489261 CDC42BPGQ6DT37 1551 aa14.24□□□□□ -0.13
ITSN1-231ENST00000489261 PPIP5K1Q6PFW1 1433 aa14.24□□□□□ -0.13
ITSN1-231ENST00000489261 PLEKHG3A1L390 1219 aa14.23□□□□□ -0.13
ITSN1-231ENST00000489261 TNNT2P45379 298 aaPredicted RBP14.23□□□□□ -0.13
ITSN1-231ENST00000489261 IRX6P78412 446 aaPredicted RBP14.23□□□□□ -0.13
ITSN1-231ENST00000489261 ILDR2Q71H61 639 aa14.23□□□□□ -0.13
ITSN1-231ENST00000489261 ANKRD26Q9UPS8 1709 aa14.23□□□□□ -0.13
ITSN1-231ENST00000489261 ADGRB2O60241 1585 aa14.22□□□□□ -0.13
ITSN1-231ENST00000489261 DUSP27Q5VZP5 1158 aa14.22□□□□□ -0.13
ITSN1-231ENST00000489261 WDR63Q8IWG1 891 aa14.22□□□□□ -0.13
ITSN1-231ENST00000489261 BRINP3Q76B58 766 aa14.21□□□□□ -0.13
ITSN1-231ENST00000489261 CCDC146Q8IYE0 955 aa14.21□□□□□ -0.13
ITSN1-231ENST00000489261 PNPLA6Q8IY17 1366 aa14.21□□□□□ -0.14
ITSN1-231ENST00000489261 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.2□□□□□ -0.14
ITSN1-231ENST00000489261 AATKQ6ZMQ8 1374 aa14.2□□□□□ -0.14
ITSN1-231ENST00000489261 C1orf167Q5SNV9 1468 aa14.19□□□□□ -0.14
ITSN1-231ENST00000489261 FMN2Q9NZ56 1722 aa14.19□□□□□ -0.14
ITSN1-231ENST00000489261 SENP3-EIF4A1A0A087X0R7 540 aa14.19□□□□□ -0.14
ITSN1-231ENST00000489261 DIAPH1O60610 1272 aaKnown RBP14.19□□□□□ -0.14
ITSN1-231ENST00000489261 U2AF1L5P0DN76 240 aaPredicted RBP14.19□□□□□ -0.14
ITSN1-231ENST00000489261 U2AF1Q01081 240 aaKnown RBP eCLIP14.19□□□□□ -0.14
ITSN1-231ENST00000489261 JCADQ9P266 1359 aa14.19□□□□□ -0.14
ITSN1-231ENST00000489261 WWC1Q8IX03 1113 aa14.18□□□□□ -0.14
ITSN1-231ENST00000489261 TCP11L2Q8N4U5 519 aa14.18□□□□□ -0.14
ITSN1-231ENST00000489261 COG3Q96JB2 828 aa14.18□□□□□ -0.14
ITSN1-231ENST00000489261 PHF23Q9BUL5 403 aaPredicted RBP14.18□□□□□ -0.14
ITSN1-231ENST00000489261 KIF20BQ96Q89 1820 aa14.17□□□□□ -0.14
ITSN1-231ENST00000489261 FCHSD2O94868 740 aa14.16□□□□□ -0.14
ITSN1-231ENST00000489261 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.16□□□□□ -0.14
ITSN1-231ENST00000489261 RGPD8O14715 1765 aaPredicted RBP14.16□□□□□ -0.14
ITSN1-231ENST00000489261 COL3A1P02461 1466 aaPredicted RBP14.15□□□□□ -0.14
ITSN1-231ENST00000489261 POLKQ9UBT6 870 aa14.15□□□□□ -0.14
ITSN1-231ENST00000489261 PRR36Q9H6K5 1346 aa14.15□□□□□ -0.15
ITSN1-231ENST00000489261 NEFMP07197 916 aa14.14□□□□□ -0.15
ITSN1-231ENST00000489261 CCDC136Q96JN2 1154 aa14.14□□□□□ -0.15
ITSN1-231ENST00000489261 LRP6O75581 1613 aa14.14□□□□□ -0.15
ITSN1-231ENST00000489261 TTC21AQ8NDW8 1320 aa14.14□□□□□ -0.15
ITSN1-231ENST00000489261 U2SURPO15042 1029 aaKnown RBP14.13□□□□□ -0.15
ITSN1-231ENST00000489261 PLEKHF1Q96S99 279 aa14.13□□□□□ -0.15
ITSN1-231ENST00000489261 ANKARQ7Z5J8 1434 aa14.13□□□□□ -0.15
ITSN1-231ENST00000489261 KIF1AQ12756 1690 aa14.13□□□□□ -0.15
ITSN1-231ENST00000489261 SPATA31A6Q5VVP1 1343 aa14.13□□□□□ -0.15
ITSN1-231ENST00000489261 TTC21BQ7Z4L5 1316 aa14.13□□□□□ -0.15
ITSN1-231ENST00000489261 MON2Q7Z3U7 1717 aa14.12□□□□□ -0.15
ITSN1-231ENST00000489261 AKAP12Q02952 1782 aa14.12□□□□□ -0.15
ITSN1-231ENST00000489261 CT47B1P0C2W7 299 aaPredicted RBP14.12□□□□□ -0.15
ITSN1-231ENST00000489261 B4GALNT3Q6L9W6 998 aa14.12□□□□□ -0.15
ITSN1-231ENST00000489261 MYH16Q9H6N6 1097 aa14.12□□□□□ -0.15
ITSN1-231ENST00000489261 RGS17Q9UGC6 210 aaPredicted RBP14.12□□□□□ -0.15
ITSN1-231ENST00000489261 ACEP12821 1306 aa14.12□□□□□ -0.15
ITSN1-231ENST00000489261 IL16Q14005 1332 aa14.12□□□□□ -0.15
ITSN1-231ENST00000489261 MAPK8IP3Q9UPT6 1336 aa14.12□□□□□ -0.15
ITSN1-231ENST00000489261 NME9Q86XW9 330 aa14.11□□□□□ -0.15
ITSN1-231ENST00000489261 TSHZ2Q9NRE2 1034 aa14.11□□□□□ -0.15
ITSN1-231ENST00000489261 COL22A1Q8NFW1 1626 aaPredicted RBP14.11□□□□□ -0.15
ITSN1-231ENST00000489261 ITSN1Q15811 1721 aa14.1□□□□□ -0.15
ITSN1-231ENST00000489261 SOCS7O14512 581 aa14.1□□□□□ -0.15
ITSN1-231ENST00000489261 TMPOP42166 694 aaKnown RBP14.1□□□□□ -0.15
ITSN1-231ENST00000489261 ORAI2Q96SN7 254 aa14.1□□□□□ -0.15
ITSN1-231ENST00000489261 USP6P35125 1406 aa14.09□□□□□ -0.15
ITSN1-231ENST00000489261 DDX17Q92841 729 aaKnown RBP14.09□□□□□ -0.15
ITSN1-231ENST00000489261 CDK12Q9NYV4 1490 aaPredicted RBP14.09□□□□□ -0.15
ITSN1-231ENST00000489261 TOPAZ1Q8N9V7 1692 aa14.09□□□□□ -0.15
ITSN1-231ENST00000489261 SOS2Q07890 1332 aaPredicted RBP14.09□□□□□ -0.15
ITSN1-231ENST00000489261 SSH2Q76I76 1423 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms