RNA–Protein interactions for RNA: ENST00000488913.1

PATJ-209, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 3

Gene PATJ, Length 532 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-209ENST00000488913 LIMD1Q9UGP4 676 aa12.72□□□□□ -0.37
PATJ-209ENST00000488913 PRPF38BQ5VTL8 546 aaKnown RBP12.71□□□□□ -0.37
PATJ-209ENST00000488913 ATP13A2Q9NQ11 1180 aa12.71□□□□□ -0.37
PATJ-209ENST00000488913 WASF2Q9Y6W5 498 aa12.71□□□□□ -0.37
PATJ-209ENST00000488913 ZNF511Q8NB15 262 aa12.69□□□□□ -0.38
PATJ-209ENST00000488913 QPCTQ16769 361 aa12.68□□□□□ -0.38
PATJ-209ENST00000488913 MAP10Q9P2G4 905 aa12.68□□□□□ -0.38
PATJ-209ENST00000488913 TLL2Q9Y6L7 1015 aa12.66□□□□□ -0.38
PATJ-209ENST00000488913 PER1O15534 1290 aaPredicted RBP12.65□□□□□ -0.38
PATJ-209ENST00000488913 POLR3EQ9NVU0 708 aa12.65□□□□□ -0.38
PATJ-209ENST00000488913 SNRPBP14678 240 aaKnown RBP12.64□□□□□ -0.39
PATJ-209ENST00000488913 VARSP26640 1264 aaKnown RBP12.64□□□□□ -0.39
PATJ-209ENST00000488913 LILRB3O75022 631 aa12.63□□□□□ -0.39
PATJ-209ENST00000488913 F12P00748 615 aaPredicted RBP12.62□□□□□ -0.39
PATJ-209ENST00000488913 CLK2P49760 499 aaKnown RBP12.62□□□□□ -0.39
PATJ-209ENST00000488913 RTL5Q5HYW3 569 aaPredicted RBP12.62□□□□□ -0.39
PATJ-209ENST00000488913 RSPH6AQ9H0K4 717 aa12.62□□□□□ -0.39
PATJ-209ENST00000488913 SENP2Q9HC62 589 aa12.62□□□□□ -0.39
PATJ-209ENST00000488913 PLEKHG3A1L390 1219 aa12.61□□□□□ -0.39
PATJ-209ENST00000488913 CAPN5O15484 640 aaPredicted RBP12.61□□□□□ -0.39
PATJ-209ENST00000488913 TUSC1Q2TAM9 212 aa12.61□□□□□ -0.39
PATJ-209ENST00000488913 TREML4Q6UXN2 200 aa12.61□□□□□ -0.39
PATJ-209ENST00000488913 FOXJ1Q92949 421 aa12.61□□□□□ -0.39
PATJ-209ENST00000488913 BCANQ96GW7 911 aa12.61□□□□□ -0.39
PATJ-209ENST00000488913 AGERQ15109 404 aa12.6□□□□□ -0.39
PATJ-209ENST00000488913 TRIM47Q96LD4 638 aa12.6□□□□□ -0.39
PATJ-209ENST00000488913 ARID5BQ14865 1188 aa12.58□□□□□ -0.4
PATJ-209ENST00000488913 HELBQ8NG08 1087 aaPredicted RBP12.58□□□□□ -0.4
PATJ-209ENST00000488913 FAM174AQ8TBP5 190 aa12.58□□□□□ -0.4
PATJ-209ENST00000488913 GPBP1L1Q9HC44 474 aaPredicted RBP12.58□□□□□ -0.4
PATJ-209ENST00000488913 ATP1B4Q9UN42 357 aaPredicted RBP12.58□□□□□ -0.4
PATJ-209ENST00000488913 BMP1P13497 986 aa12.57□□□□□ -0.4
PATJ-209ENST00000488913 NNTQ13423 1086 aa12.56□□□□□ -0.4
PATJ-209ENST00000488913 KIFC2Q96AC6 838 aa12.56□□□□□ -0.4
PATJ-209ENST00000488913 WFS1O76024 890 aa12.54□□□□□ -0.4
PATJ-209ENST00000488913 TRIM46Q7Z4K8 759 aa12.54□□□□□ -0.4
PATJ-209ENST00000488913 MPNDQ8N594 471 aa12.54□□□□□ -0.4
PATJ-209ENST00000488913 KDM4CQ9H3R0 1056 aa12.54□□□□□ -0.4
PATJ-209ENST00000488913 C4orf48Q5BLP8 95 aa12.52□□□□□ -0.41
PATJ-209ENST00000488913 BPHLQ86WA6 291 aaPredicted RBP12.52□□□□□ -0.41
PATJ-209ENST00000488913 CTDSPL2Q05D32 466 aa12.51□□□□□ -0.41
PATJ-209ENST00000488913 LCE2AQ5TA79 106 aaPredicted RBP12.51□□□□□ -0.41
PATJ-209ENST00000488913 ARMC2Q8NEN0 867 aa12.51□□□□□ -0.41
PATJ-209ENST00000488913 FAM117AQ9C073 453 aa12.51□□□□□ -0.41
PATJ-209ENST00000488913 SLC24A1O60721 1099 aa12.5□□□□□ -0.41
PATJ-209ENST00000488913 ADH1CP00326 375 aa12.5□□□□□ -0.41
PATJ-209ENST00000488913 WDR4P57081 412 aaKnown RBP12.5□□□□□ -0.41
PATJ-209ENST00000488913 NFX1Q12986 1120 aaKnown RBP12.49□□□□□ -0.41
PATJ-209ENST00000488913 SKIV2LQ15477 1246 aaKnown RBP12.49□□□□□ -0.41
PATJ-209ENST00000488913 PROCA1Q8NCQ7 364 aaPredicted RBP12.49□□□□□ -0.41
PATJ-209ENST00000488913 CDK15Q96Q40 435 aa12.49□□□□□ -0.41
PATJ-209ENST00000488913 TERTO14746 1132 aaKnown RBP12.47□□□□□ -0.41
PATJ-209ENST00000488913 TIMP2P16035 220 aa12.47□□□□□ -0.41
PATJ-209ENST00000488913 DDRGK1Q96HY6 314 aa12.47□□□□□ -0.41
PATJ-209ENST00000488913 MAGEB6P1A0A0J9YX57 407 aa12.46□□□□□ -0.41
PATJ-209ENST00000488913 NBPF14Q5TI25 921 aa12.46□□□□□ -0.41
PATJ-209ENST00000488913 ZFP42Q96MM3 310 aa12.46□□□□□ -0.41
PATJ-209ENST00000488913 SH3D19Q5HYK7 790 aa12.45□□□□□ -0.42
PATJ-209ENST00000488913 FBXO31Q5XUX0 539 aaPredicted RBP12.45□□□□□ -0.42
PATJ-209ENST00000488913 GRM5P41594 1212 aa12.44□□□□□ -0.42
PATJ-209ENST00000488913 LRRN4Q8WUT4 740 aa12.44□□□□□ -0.42
PATJ-209ENST00000488913 CARD14Q9BXL6 1004 aa12.44□□□□□ -0.42
PATJ-209ENST00000488913 ZIC2O95409 532 aaPredicted RBP12.43□□□□□ -0.42
PATJ-209ENST00000488913 NR3C2P08235 984 aa12.43□□□□□ -0.42
PATJ-209ENST00000488913 NR5A1Q13285 461 aa12.43□□□□□ -0.42
PATJ-209ENST00000488913 MRPL14Q6P1L8 145 aaKnown RBP12.43□□□□□ -0.42
PATJ-209ENST00000488913 PURBQ96QR8 312 aaKnown RBP12.43□□□□□ -0.42
PATJ-209ENST00000488913 KLF16Q9BXK1 252 aaPredicted RBP12.43□□□□□ -0.42
PATJ-209ENST00000488913 SCARF1Q14162 830 aa12.42□□□□□ -0.42
PATJ-209ENST00000488913 SH3BP5LQ7L8J4 393 aa12.42□□□□□ -0.42
PATJ-209ENST00000488913 ZFAND3Q9H8U3 227 aa12.42□□□□□ -0.42
PATJ-209ENST00000488913 SH3RF1Q7Z6J0 888 aa12.41□□□□□ -0.42
PATJ-209ENST00000488913 ITPKCQ96DU7 683 aa12.41□□□□□ -0.42
PATJ-209ENST00000488913 VASH1Q7L8A9 365 aaPredicted RBP12.4□□□□□ -0.42
PATJ-209ENST00000488913 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.4□□□□□ -0.42
PATJ-209ENST00000488913 CCDC180Q9P1Z9 1646 aa12.4□□□□□ -0.42
PATJ-209ENST00000488913 AP1G2O75843 785 aa12.39□□□□□ -0.43
PATJ-209ENST00000488913 C1QTNF2Q9BXJ5 285 aa12.39□□□□□ -0.43
PATJ-209ENST00000488913 NXF1Q9UBU9 619 aaKnown RBP12.39□□□□□ -0.43
PATJ-209ENST00000488913 FSHRP23945 695 aa12.38□□□□□ -0.43
PATJ-209ENST00000488913 NR6A1Q15406 480 aa12.38□□□□□ -0.43
PATJ-209ENST00000488913 VEGFBP49765 207 aa12.37□□□□□ -0.43
PATJ-209ENST00000488913 C6orf118Q5T5N4 469 aa12.37□□□□□ -0.43
PATJ-209ENST00000488913 LCE2CQ5TA81 110 aa12.37□□□□□ -0.43
PATJ-209ENST00000488913 PPP2R2DQ66LE6 453 aa12.37□□□□□ -0.43
PATJ-209ENST00000488913 SLC16A10Q8TF71 515 aa12.37□□□□□ -0.43
PATJ-209ENST00000488913 GPKOWQ92917 476 aaPredicted RBP eCLIP12.37□□□□□ -0.43
PATJ-209ENST00000488913 ARHGAP9Q9BRR9 750 aa12.36□□□□□ -0.43
PATJ-209ENST00000488913 FKBPLQ9UIM3 349 aa12.36□□□□□ -0.43
PATJ-209ENST00000488913 SOBPA7XYQ1 873 aa12.35□□□□□ -0.43
PATJ-209ENST00000488913 TRMT44Q8IYL2 757 aaKnown RBP12.35□□□□□ -0.43
PATJ-209ENST00000488913 ERFEQ4G0M1 354 aa12.34□□□□□ -0.43
PATJ-209ENST00000488913 PDXDC2PQ6P474 469 aa12.34□□□□□ -0.43
PATJ-209ENST00000488913 MAP4K5Q9Y4K4 846 aa12.34□□□□□ -0.43
PATJ-209ENST00000488913 WIPF1O43516 503 aa12.32□□□□□ -0.44
PATJ-209ENST00000488913 ZBTB33Q86T24 672 aa12.32□□□□□ -0.44
PATJ-209ENST00000488913 UPP2O95045 317 aa12.31□□□□□ -0.44
PATJ-209ENST00000488913 BMP2P12643 396 aa12.31□□□□□ -0.44
PATJ-209ENST00000488913 CCDC116Q8IYX3 515 aa12.31□□□□□ -0.44
PATJ-209ENST00000488913 EPS8L1Q8TE68 723 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms