RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 PRM3Q9NNZ6 103 aa8.41□□□□□ -1.06
SSR1-209ENST00000488834 Q6ZNB5 142 aa8.4□□□□□ -1.06
SSR1-209ENST00000488834 HMX1Q9NP08 348 aaPredicted RBP8.4□□□□□ -1.06
SSR1-209ENST00000488834 SNRKQ9NRH2 765 aa8.4□□□□□ -1.06
SSR1-209ENST00000488834 SKOR1P84550 965 aa8.39□□□□□ -1.07
SSR1-209ENST00000488834 FLIIQ13045 1269 aa8.39□□□□□ -1.07
SSR1-209ENST00000488834 LINC01559Q495D7 138 aa8.39□□□□□ -1.07
SSR1-209ENST00000488834 NRG2O14511 850 aaPredicted RBP8.38□□□□□ -1.07
SSR1-209ENST00000488834 FOXC1Q12948 553 aa8.38□□□□□ -1.07
SSR1-209ENST00000488834 AGERQ15109 404 aa8.38□□□□□ -1.07
SSR1-209ENST00000488834 NBPF14Q5TI25 921 aa8.38□□□□□ -1.07
SSR1-209ENST00000488834 MTMR14Q8NCE2 650 aa8.37□□□□□ -1.07
SSR1-209ENST00000488834 BAP1Q92560 729 aa8.37□□□□□ -1.07
SSR1-209ENST00000488834 MCM6Q14566 821 aa8.36□□□□□ -1.07
SSR1-209ENST00000488834 EPS8L1Q8TE68 723 aa8.36□□□□□ -1.07
SSR1-209ENST00000488834 FKBPLQ9UIM3 349 aa8.36□□□□□ -1.07
SSR1-209ENST00000488834 GTF3C3Q9Y5Q9 886 aa8.36□□□□□ -1.07
SSR1-209ENST00000488834 NDUFB9Q9Y6M9 179 aa8.35□□□□□ -1.07
SSR1-209ENST00000488834 RAD21O60216 631 aa8.34□□□□□ -1.07
SSR1-209ENST00000488834 UBTFP17480 764 aaKnown RBP8.34□□□□□ -1.07
SSR1-209ENST00000488834 WNT7BP56706 349 aa8.34□□□□□ -1.07
SSR1-209ENST00000488834 PRR20EP86478 221 aa8.34□□□□□ -1.07
SSR1-209ENST00000488834 PRR20CP86479 221 aa8.34□□□□□ -1.07
SSR1-209ENST00000488834 PRR20DP86480 221 aa8.34□□□□□ -1.07
SSR1-209ENST00000488834 PRR20BP86481 221 aa8.34□□□□□ -1.07
SSR1-209ENST00000488834 PRR20AP86496 221 aa8.34□□□□□ -1.07
SSR1-209ENST00000488834 ZNF511Q8NB15 262 aa8.34□□□□□ -1.07
SSR1-209ENST00000488834 SOCS7O14512 581 aa8.33□□□□□ -1.08
SSR1-209ENST00000488834 EHBP1Q8NDI1 1231 aa8.33□□□□□ -1.08
SSR1-209ENST00000488834 GPKOWQ92917 476 aaPredicted RBP eCLIP8.33□□□□□ -1.082e-15■□□□□ 9.4
SSR1-209ENST00000488834 TRIM34Q9BYJ4 488 aa8.33□□□□□ -1.08
SSR1-209ENST00000488834 ZC3H4Q9UPT8 1303 aaKnown RBP8.32□□□□□ -1.08
SSR1-209ENST00000488834 MAGEB6P1A0A0J9YX57 407 aa8.32□□□□□ -1.08
SSR1-209ENST00000488834 SH3BP2P78314 561 aa8.32□□□□□ -1.08
SSR1-209ENST00000488834 BPHLQ86WA6 291 aaPredicted RBP8.32□□□□□ -1.08
SSR1-209ENST00000488834 GJD4Q96KN9 370 aaPredicted RBP8.32□□□□□ -1.08
SSR1-209ENST00000488834 TOR4AQ9NXH8 423 aa8.32□□□□□ -1.08
SSR1-209ENST00000488834 ST8SIA5O15466 376 aa8.31□□□□□ -1.08
SSR1-209ENST00000488834 PTK2Q05397 1052 aa8.31□□□□□ -1.08
SSR1-209ENST00000488834 ARHGAP9Q9BRR9 750 aa8.31□□□□□ -1.08
SSR1-209ENST00000488834 CARD14Q9BXL6 1004 aa8.31□□□□□ -1.08
SSR1-209ENST00000488834 TBC1D2BQ9UPU7 963 aa8.31□□□□□ -1.08
SSR1-209ENST00000488834 POTECB2RU33 542 aa8.3□□□□□ -1.08
SSR1-209ENST00000488834 ABL2P42684 1182 aa8.3□□□□□ -1.08
SSR1-209ENST00000488834 MYT1Q01538 1121 aa8.3□□□□□ -1.08
SSR1-209ENST00000488834 RC3H1Q5TC82 1133 aaKnown RBP8.3□□□□□ -1.08
SSR1-209ENST00000488834 PDXDC2PQ6P474 469 aa8.3□□□□□ -1.08
SSR1-209ENST00000488834 TRAF7Q6Q0C0 670 aa8.3□□□□□ -1.08
SSR1-209ENST00000488834 WWC1Q8IX03 1113 aa8.3□□□□□ -1.08
SSR1-209ENST00000488834 MRGPRX2Q96LB1 330 aa8.3□□□□□ -1.08
SSR1-209ENST00000488834 GDPD2Q9HCC8 539 aa8.3□□□□□ -1.08
SSR1-209ENST00000488834 FAM187AA6NFU0 413 aa8.29□□□□□ -1.08
SSR1-209ENST00000488834 WNT7AO00755 349 aa8.29□□□□□ -1.08
SSR1-209ENST00000488834 LAPTM4AQ15012 233 aa8.29□□□□□ -1.08
SSR1-209ENST00000488834 ZBTB33Q86T24 672 aa8.29□□□□□ -1.08
SSR1-209ENST00000488834 FOXJ1Q92949 421 aa8.29□□□□□ -1.08
SSR1-209ENST00000488834 DACH1Q9UI36 760 aa8.29□□□□□ -1.08
SSR1-209ENST00000488834 J3QL48 77 aa8.28□□□□□ -1.08
SSR1-209ENST00000488834 TTC24A2A3L6 582 aaPredicted RBP8.27□□□□□ -1.09
SSR1-209ENST00000488834 SMPD1P17405 629 aa8.27□□□□□ -1.09
SSR1-209ENST00000488834 VARSP26640 1264 aaKnown RBP8.27□□□□□ -1.09
SSR1-209ENST00000488834 CYP4X1Q8N118 509 aa8.27□□□□□ -1.09
SSR1-209ENST00000488834 FAM174AQ8TBP5 190 aa8.27□□□□□ -1.09
SSR1-209ENST00000488834 GPSM3Q9Y4H4 160 aa8.27□□□□□ -1.09
SSR1-209ENST00000488834 ZBBXA8MT70 800 aa8.26□□□□□ -1.09
SSR1-209ENST00000488834 ARID5BQ14865 1188 aa8.26□□□□□ -1.09
SSR1-209ENST00000488834 SH3BP5LQ7L8J4 393 aa8.26□□□□□ -1.09
SSR1-209ENST00000488834 COG6Q9Y2V7 657 aa8.25□□□□□ -1.09
SSR1-209ENST00000488834 ZNF330Q9Y3S2 320 aaPredicted RBP8.25□□□□□ -1.09
SSR1-209ENST00000488834 ADAM32Q8TC27 787 aa8.24□□□□□ -1.09
SSR1-209ENST00000488834 SLC10A4Q96EP9 437 aa8.24□□□□□ -1.09
SSR1-209ENST00000488834 POM121Q96HA1 1249 aa8.24□□□□□ -1.09
SSR1-209ENST00000488834 SIAH2O43255 324 aa8.23□□□□□ -1.09
SSR1-209ENST00000488834 ALDH1A1P00352 501 aa8.23□□□□□ -1.09
SSR1-209ENST00000488834 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
SSR1-209ENST00000488834 SH3RF1Q7Z6J0 888 aa8.23□□□□□ -1.09
SSR1-209ENST00000488834 DZIP3Q86Y13 1208 aaKnown RBP8.23□□□□□ -1.09
SSR1-209ENST00000488834 AAASQ9NRG9 546 aa8.23□□□□□ -1.09
SSR1-209ENST00000488834 TLL2Q9Y6L7 1015 aa8.23□□□□□ -1.09
SSR1-209ENST00000488834 DGAT1O75907 488 aa8.22□□□□□ -1.09
SSR1-209ENST00000488834 FBXO45P0C2W1 286 aa8.22□□□□□ -1.09
SSR1-209ENST00000488834 NR1H3Q13133 447 aa8.22□□□□□ -1.09
SSR1-209ENST00000488834 WASHC4Q2M389 1173 aa8.22□□□□□ -1.09
SSR1-209ENST00000488834 PKDCCQ504Y2 493 aa8.22□□□□□ -1.09
SSR1-209ENST00000488834 SNIP1Q8TAD8 396 aaKnown RBP8.22□□□□□ -1.09
SSR1-209ENST00000488834 HPS1Q92902 700 aa8.22□□□□□ -1.09
SSR1-209ENST00000488834 CLUAP1Q96AJ1 413 aa8.22□□□□□ -1.09
SSR1-209ENST00000488834 PCDHB9Q9Y5E1 797 aa8.22□□□□□ -1.09
SSR1-209ENST00000488834 WASF2Q9Y6W5 498 aa8.22□□□□□ -1.09
SSR1-209ENST00000488834 ERFEQ4G0M1 354 aa8.21□□□□□ -1.1
SSR1-209ENST00000488834 VASH1Q7L8A9 365 aaPredicted RBP8.21□□□□□ -1.1
SSR1-209ENST00000488834 C14orf37Q86TY3 774 aa8.21□□□□□ -1.1
SSR1-209ENST00000488834 ZNF592Q92610 1267 aa8.21□□□□□ -1.1
SSR1-209ENST00000488834 EIF4G2P78344 907 aaKnown RBP eCLIP8.2□□□□□ -1.1
SSR1-209ENST00000488834 VAC14Q08AM6 782 aa8.2□□□□□ -1.1
SSR1-209ENST00000488834 GPR37L1O60883 481 aa8.19□□□□□ -1.1
SSR1-209ENST00000488834 AVPP01185 164 aa8.19□□□□□ -1.1
SSR1-209ENST00000488834 IRF5Q13568 498 aa8.19□□□□□ -1.1
SSR1-209ENST00000488834 NBPF20Q3BBV1 942 aa8.19□□□□□ -1.1
SSR1-209ENST00000488834 PROSER2Q86WR7 435 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms