RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 AK9Q5TCS8 1911 aa19.99■□□□□ 0.79
MCF2L-229ENST00000488765 K7ELQ4 463 aaPredicted RBP19.99■□□□□ 0.79
MCF2L-229ENST00000488765 PLCH2O75038 1416 aa19.98■□□□□ 0.79
MCF2L-229ENST00000488765 CDC42BPBQ9Y5S2 1711 aa19.98■□□□□ 0.79
MCF2L-229ENST00000488765 ABCC2Q92887 1545 aa19.98■□□□□ 0.79
MCF2L-229ENST00000488765 KIF2CQ99661 725 aa19.97■□□□□ 0.79
MCF2L-229ENST00000488765 GPT2Q8TD30 523 aa19.97■□□□□ 0.79
MCF2L-229ENST00000488765 TSR2Q969E8 191 aaKnown RBP19.97■□□□□ 0.79
MCF2L-229ENST00000488765 PLA2R1Q13018 1463 aa19.96■□□□□ 0.79
MCF2L-229ENST00000488765 TMEM63CQ9P1W3 806 aa19.96■□□□□ 0.79
MCF2L-229ENST00000488765 ADGBQ8N7X0 1667 aa19.96■□□□□ 0.79
MCF2L-229ENST00000488765 KIAA2012Q0VF49 1180 aa19.95■□□□□ 0.78
MCF2L-229ENST00000488765 TMEM132EQ6IEE7 984 aa19.95■□□□□ 0.78
MCF2L-229ENST00000488765 LMBRD1Q9NUN5 540 aa19.95■□□□□ 0.78
MCF2L-229ENST00000488765 ADCY10Q96PN6 1610 aa19.95■□□□□ 0.78
MCF2L-229ENST00000488765 TRAK1Q9UPV9 953 aa19.95■□□□□ 0.78
MCF2L-229ENST00000488765 ZGPATQ8N5A5 531 aaKnown RBP19.94■□□□□ 0.78
MCF2L-229ENST00000488765 MYRIPQ8NFW9 859 aa19.94■□□□□ 0.78
MCF2L-229ENST00000488765 PDLIM2Q96JY6 352 aa19.94■□□□□ 0.78
MCF2L-229ENST00000488765 CCDC39Q9UFE4 941 aa19.94■□□□□ 0.78
MCF2L-229ENST00000488765 CIZ1Q9ULV3 898 aaPredicted RBP19.94■□□□□ 0.78
MCF2L-229ENST00000488765 ZBTB9Q96C00 473 aa19.93■□□□□ 0.78
MCF2L-229ENST00000488765 KCNJ4P48050 445 aa19.93■□□□□ 0.78
MCF2L-229ENST00000488765 MVPQ14764 893 aaKnown RBP19.93■□□□□ 0.78
MCF2L-229ENST00000488765 SHANK2Q9UPX8 1470 aa19.93■□□□□ 0.78
MCF2L-229ENST00000488765 PLPPR3Q6T4P5 718 aa19.93■□□□□ 0.78
MCF2L-229ENST00000488765 PDCL2Q8N4E4 241 aa19.93■□□□□ 0.78
MCF2L-229ENST00000488765 C1orf115Q9H7X2 142 aa19.93■□□□□ 0.78
MCF2L-229ENST00000488765 ANKRD45Q5TZF3 282 aa19.92■□□□□ 0.78
MCF2L-229ENST00000488765 BCL2L12Q9HB09 334 aa19.92■□□□□ 0.78
MCF2L-229ENST00000488765 ZNF445P59923 1031 aa19.92■□□□□ 0.78
MCF2L-229ENST00000488765 NOL8Q76FK4 1167 aaKnown RBP19.92■□□□□ 0.78
MCF2L-229ENST00000488765 DZIP1LQ8IYY4 767 aaKnown RBP19.92■□□□□ 0.78
MCF2L-229ENST00000488765 SNX21Q969T3 373 aa19.92■□□□□ 0.78
MCF2L-229ENST00000488765 GTPBP4Q9BZE4 634 aaKnown RBP19.92■□□□□ 0.78
MCF2L-229ENST00000488765 KIF20AO95235 890 aa19.91■□□□□ 0.78
MCF2L-229ENST00000488765 TCP11L2Q8N4U5 519 aa19.91■□□□□ 0.78
MCF2L-229ENST00000488765 KIF3AQ9Y496 699 aa19.91■□□□□ 0.78
MCF2L-229ENST00000488765 RBM25P49756 843 aaKnown RBP19.91■□□□□ 0.78
MCF2L-229ENST00000488765 MLECQ14165 292 aa19.91■□□□□ 0.78
MCF2L-229ENST00000488765 SMC4Q9NTJ3 1288 aa19.91■□□□□ 0.78
MCF2L-229ENST00000488765 GDPD2Q9HCC8 539 aa19.9■□□□□ 0.78
MCF2L-229ENST00000488765 LETM1O95202 739 aaPredicted RBP19.9■□□□□ 0.78
MCF2L-229ENST00000488765 PRAG1Q86YV5 1406 aa19.89■□□□□ 0.78
MCF2L-229ENST00000488765 AEBP1Q8IUX7 1158 aa19.89■□□□□ 0.78
MCF2L-229ENST00000488765 ERBINQ96RT1 1412 aa19.89■□□□□ 0.77
MCF2L-229ENST00000488765 HS1BP3Q53T59 392 aa19.89■□□□□ 0.77
MCF2L-229ENST00000488765 IPO4Q8TEX9 1081 aaKnown RBP19.89■□□□□ 0.77
MCF2L-229ENST00000488765 STK26Q9P289 416 aa19.89■□□□□ 0.77
MCF2L-229ENST00000488765 FANCAO15360 1455 aa19.89■□□□□ 0.77
MCF2L-229ENST00000488765 ADGRF5Q8IZF2 1346 aa19.89■□□□□ 0.77
MCF2L-229ENST00000488765 UHRF1BP1Q6BDS2 1440 aa19.88■□□□□ 0.77
MCF2L-229ENST00000488765 CROCC2H7BZ55 1655 aa19.88■□□□□ 0.77
MCF2L-229ENST00000488765 A2MP01023 1474 aa19.88■□□□□ 0.77
MCF2L-229ENST00000488765 NOLC1Q14978 699 aaKnown RBP eCLIP19.88■□□□□ 0.77
MCF2L-229ENST00000488765 ERICH4A6NGS2 130 aa19.88■□□□□ 0.77
MCF2L-229ENST00000488765 USP25Q9UHP3 1055 aa19.88■□□□□ 0.77
MCF2L-229ENST00000488765 KANK1Q14678 1352 aa19.87■□□□□ 0.77
MCF2L-229ENST00000488765 MAGI2Q86UL8 1455 aa19.87■□□□□ 0.77
MCF2L-229ENST00000488765 CFAP65Q6ZU64 1925 aaKnown RBP19.87■□□□□ 0.77
MCF2L-229ENST00000488765 ZKSCAN2Q63HK3 967 aa19.87■□□□□ 0.77
MCF2L-229ENST00000488765 TBC1D9Q6ZT07 1266 aa19.87■□□□□ 0.77
MCF2L-229ENST00000488765 VIRMAQ69YN4 1812 aaKnown RBP19.86■□□□□ 0.77
MCF2L-229ENST00000488765 PREX2Q70Z35 1606 aa19.86■□□□□ 0.77
MCF2L-229ENST00000488765 NAA30Q147X3 362 aaPredicted RBP19.85■□□□□ 0.77
MCF2L-229ENST00000488765 ASXL2Q76L83 1435 aa19.85■□□□□ 0.77
MCF2L-229ENST00000488765 NCOA3Q9Y6Q9 1424 aa19.85■□□□□ 0.77
MCF2L-229ENST00000488765 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.85■□□□□ 0.77
MCF2L-229ENST00000488765 TRIM27P14373 513 aa19.85■□□□□ 0.77
MCF2L-229ENST00000488765 ZFP91Q96JP5 570 aaPredicted RBP19.85■□□□□ 0.77
MCF2L-229ENST00000488765 PTMSP20962 102 aa19.85■□□□□ 0.77
MCF2L-229ENST00000488765 KIF16BQ96L93 1317 aa19.84■□□□□ 0.77
MCF2L-229ENST00000488765 INSRP06213 1382 aa19.84■□□□□ 0.77
MCF2L-229ENST00000488765 APBB1O00213 710 aa19.84■□□□□ 0.77
MCF2L-229ENST00000488765 LRSAM1Q6UWE0 723 aa19.84■□□□□ 0.77
MCF2L-229ENST00000488765 TMEM57Q8N5G2 664 aa19.83■□□□□ 0.77
MCF2L-229ENST00000488765 ADGRL1O94910 1474 aa19.83■□□□□ 0.77
MCF2L-229ENST00000488765 ZCCHC11Q5TAX3 1644 aaKnown RBP19.83■□□□□ 0.77
MCF2L-229ENST00000488765 ARHGEF5Q12774 1597 aa19.82■□□□□ 0.76
MCF2L-229ENST00000488765 DTNBO60941 627 aa19.82■□□□□ 0.76
MCF2L-229ENST00000488765 SPC24Q8NBT2 197 aa19.82■□□□□ 0.76
MCF2L-229ENST00000488765 NOB1Q9ULX3 412 aaKnown RBP19.82■□□□□ 0.76
MCF2L-229ENST00000488765 RIOK3O14730 519 aaKnown RBP19.81■□□□□ 0.76
MCF2L-229ENST00000488765 IRX5P78411 483 aaPredicted RBP19.81■□□□□ 0.76
MCF2L-229ENST00000488765 CHD1LQ86WJ1 897 aa19.8■□□□□ 0.76
MCF2L-229ENST00000488765 EXOSC9Q06265 439 aaKnown RBP19.8■□□□□ 0.76
MCF2L-229ENST00000488765 SSH1Q8WYL5 1049 aa19.79■□□□□ 0.76
MCF2L-229ENST00000488765 WDR7Q9Y4E6 1490 aa19.78■□□□□ 0.76
MCF2L-229ENST00000488765 E9PCH4 1651 aa19.78■□□□□ 0.76
MCF2L-229ENST00000488765 MYO5CQ9NQX4 1742 aa19.78■□□□□ 0.76
MCF2L-229ENST00000488765 MCM5P33992 734 aa19.78■□□□□ 0.76
MCF2L-229ENST00000488765 ZDHHC9Q9Y397 364 aa19.78■□□□□ 0.76
MCF2L-229ENST00000488765 COL17A1Q9UMD9 1497 aaPredicted RBP19.78■□□□□ 0.76
MCF2L-229ENST00000488765 DUOX2Q9NRD8 1548 aa19.77■□□□□ 0.76
MCF2L-229ENST00000488765 TAF7LQ5H9L4 462 aa19.77■□□□□ 0.75
MCF2L-229ENST00000488765 STAG3Q9UJ98 1225 aa19.77■□□□□ 0.75
MCF2L-229ENST00000488765 UGGT1Q9NYU2 1555 aa19.76■□□□□ 0.75
MCF2L-229ENST00000488765 ADCY5O95622 1261 aa19.76■□□□□ 0.75
MCF2L-229ENST00000488765 NUCB2P80303 420 aa19.76■□□□□ 0.75
MCF2L-229ENST00000488765 TSPY26PQ9H489 355 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms