RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 NWD1Q149M9 1564 aa10.31□□□□□ -0.76
APOBEC3A-203ENST00000488758 ADGRB2O60241 1585 aa10.3□□□□□ -0.76
APOBEC3A-203ENST00000488758 NKTRP30414 1462 aaKnown RBP10.3□□□□□ -0.76
APOBEC3A-203ENST00000488758 ANKRD36BQ8N2N9 1353 aa10.29□□□□□ -0.76
APOBEC3A-203ENST00000488758 MYOM1P52179 1685 aa10.29□□□□□ -0.76
APOBEC3A-203ENST00000488758 CARD14Q9BXL6 1004 aa10.29□□□□□ -0.76
APOBEC3A-203ENST00000488758 C19orf44Q9H6X5 657 aa10.29□□□□□ -0.76
APOBEC3A-203ENST00000488758 PRKRIP1Q9H875 184 aaPredicted RBP10.29□□□□□ -0.76
APOBEC3A-203ENST00000488758 KTN1Q86UP2 1357 aaKnown RBP10.28□□□□□ -0.76
APOBEC3A-203ENST00000488758 PPIP5K1Q6PFW1 1433 aa10.28□□□□□ -0.76
APOBEC3A-203ENST00000488758 NCOA3Q9Y6Q9 1424 aa10.28□□□□□ -0.76
APOBEC3A-203ENST00000488758 RALBP1Q15311 655 aa10.28□□□□□ -0.76
APOBEC3A-203ENST00000488758 CC2D1BQ5T0F9 858 aaKnown RBP10.28□□□□□ -0.76
APOBEC3A-203ENST00000488758 PRR36Q9H6K5 1346 aa10.28□□□□□ -0.76
APOBEC3A-203ENST00000488758 TMEM94Q12767 1356 aa10.27□□□□□ -0.76
APOBEC3A-203ENST00000488758 STRCP1A6NGW2 1772 aa10.27□□□□□ -0.77
APOBEC3A-203ENST00000488758 ADGRL3Q9HAR2 1447 aa10.27□□□□□ -0.77
APOBEC3A-203ENST00000488758 PLEKHG3A1L390 1219 aa10.27□□□□□ -0.77
APOBEC3A-203ENST00000488758 CCER2I3L3R5 266 aa10.27□□□□□ -0.77
APOBEC3A-203ENST00000488758 TOM1O60784 492 aa10.27□□□□□ -0.77
APOBEC3A-203ENST00000488758 ATF3P18847 181 aa10.27□□□□□ -0.77
APOBEC3A-203ENST00000488758 ANKARQ7Z5J8 1434 aa10.26□□□□□ -0.77
APOBEC3A-203ENST00000488758 NSD3Q9BZ95 1437 aa10.26□□□□□ -0.77
APOBEC3A-203ENST00000488758 AMER1Q5JTC6 1135 aaPredicted RBP10.26□□□□□ -0.77
APOBEC3A-203ENST00000488758 NGDNQ8NEJ9 315 aaKnown RBP10.26□□□□□ -0.77
APOBEC3A-203ENST00000488758 PMFBP1Q8TBY8 1022 aa10.26□□□□□ -0.77
APOBEC3A-203ENST00000488758 CREBZFQ9NS37 354 aa10.26□□□□□ -0.77
APOBEC3A-203ENST00000488758 CGNL1Q0VF96 1302 aa10.26□□□□□ -0.77
APOBEC3A-203ENST00000488758 A0A1W2PP64 1363 aa10.26□□□□□ -0.77
APOBEC3A-203ENST00000488758 ATP7BP35670 1465 aa10.25□□□□□ -0.77
APOBEC3A-203ENST00000488758 ESCO1Q5FWF5 840 aa10.25□□□□□ -0.77
APOBEC3A-203ENST00000488758 CADPS2Q86UW7 1296 aa10.25□□□□□ -0.77
APOBEC3A-203ENST00000488758 CDC42BPGQ6DT37 1551 aa10.25□□□□□ -0.77
APOBEC3A-203ENST00000488758 ACEP12821 1306 aa10.25□□□□□ -0.77
APOBEC3A-203ENST00000488758 MSH6P52701 1360 aa10.25□□□□□ -0.77
APOBEC3A-203ENST00000488758 NPC1L1Q9UHC9 1359 aa10.25□□□□□ -0.77
APOBEC3A-203ENST00000488758 NALCNQ8IZF0 1738 aa10.24□□□□□ -0.77
APOBEC3A-203ENST00000488758 MORC1Q86VD1 984 aa10.24□□□□□ -0.77
APOBEC3A-203ENST00000488758 PHF8Q9UPP1 1060 aa10.24□□□□□ -0.77
APOBEC3A-203ENST00000488758 FMN2Q9NZ56 1722 aa10.24□□□□□ -0.77
APOBEC3A-203ENST00000488758 CD163L1Q9NR16 1453 aa10.23□□□□□ -0.77
APOBEC3A-203ENST00000488758 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.23□□□□□ -0.77
APOBEC3A-203ENST00000488758 MYBBP1AQ9BQG0 1328 aaKnown RBP10.23□□□□□ -0.77
APOBEC3A-203ENST00000488758 CPSF1Q10570 1443 aaKnown RBP10.23□□□□□ -0.77
APOBEC3A-203ENST00000488758 LRRC7Q96NW7 1537 aa10.23□□□□□ -0.77
APOBEC3A-203ENST00000488758 ITSN1Q15811 1721 aa10.22□□□□□ -0.77
APOBEC3A-203ENST00000488758 RGPD8O14715 1765 aaPredicted RBP10.22□□□□□ -0.77
APOBEC3A-203ENST00000488758 HAX1O00165 279 aa10.22□□□□□ -0.77
APOBEC3A-203ENST00000488758 FARP1Q9Y4F1 1045 aaPredicted RBP10.22□□□□□ -0.77
APOBEC3A-203ENST00000488758 PARD3Q8TEW0 1356 aa10.22□□□□□ -0.77
APOBEC3A-203ENST00000488758 FYB1O15117 783 aa10.21□□□□□ -0.77
APOBEC3A-203ENST00000488758 PSME1Q06323 249 aa10.21□□□□□ -0.77
APOBEC3A-203ENST00000488758 ORAI2Q96SN7 254 aa10.21□□□□□ -0.77
APOBEC3A-203ENST00000488758 MRS2Q9HD23 443 aa10.21□□□□□ -0.77
APOBEC3A-203ENST00000488758 NSD2O96028 1365 aa10.21□□□□□ -0.78
APOBEC3A-203ENST00000488758 DCCP43146 1447 aa10.21□□□□□ -0.78
APOBEC3A-203ENST00000488758 EDC4Q6P2E9 1401 aaKnown RBP10.21□□□□□ -0.78
APOBEC3A-203ENST00000488758 USP32Q8NFA0 1604 aa10.21□□□□□ -0.78
APOBEC3A-203ENST00000488758 TOPAZ1Q8N9V7 1692 aa10.21□□□□□ -0.78
APOBEC3A-203ENST00000488758 POLR3AO14802 1390 aaPredicted RBP10.2□□□□□ -0.78
APOBEC3A-203ENST00000488758 XIRP1Q702N8 1843 aaKnown RBP10.2□□□□□ -0.78
APOBEC3A-203ENST00000488758 TTC21BQ7Z4L5 1316 aa10.2□□□□□ -0.78
APOBEC3A-203ENST00000488758 NLRP13Q86W25 1043 aa10.2□□□□□ -0.78
APOBEC3A-203ENST00000488758 GGNBP2Q9H3C7 697 aa10.2□□□□□ -0.78
APOBEC3A-203ENST00000488758 RGS17Q9UGC6 210 aaPredicted RBP10.2□□□□□ -0.78
APOBEC3A-203ENST00000488758 C1orf167Q5SNV9 1468 aa10.19□□□□□ -0.78
APOBEC3A-203ENST00000488758 PAK3O75914 559 aaPredicted RBP10.19□□□□□ -0.78
APOBEC3A-203ENST00000488758 PPP2R1AP30153 589 aa10.19□□□□□ -0.78
APOBEC3A-203ENST00000488758 TNNT2P45379 298 aaPredicted RBP10.19□□□□□ -0.78
APOBEC3A-203ENST00000488758 AKAP12Q02952 1782 aa10.19□□□□□ -0.78
APOBEC3A-203ENST00000488758 USP6P35125 1406 aa10.18□□□□□ -0.78
APOBEC3A-203ENST00000488758 TTC21AQ8NDW8 1320 aa10.18□□□□□ -0.78
APOBEC3A-203ENST00000488758 FOXO3O43524 673 aa10.18□□□□□ -0.78
APOBEC3A-203ENST00000488758 CCDC184Q52MB2 194 aa10.18□□□□□ -0.78
APOBEC3A-203ENST00000488758 NME9Q86XW9 330 aa10.18□□□□□ -0.78
APOBEC3A-203ENST00000488758 COG3Q96JB2 828 aa10.18□□□□□ -0.78
APOBEC3A-203ENST00000488758 SLAIN2Q9P270 581 aa10.18□□□□□ -0.78
APOBEC3A-203ENST00000488758 MST1RQ04912 1400 aa10.17□□□□□ -0.78
APOBEC3A-203ENST00000488758 BRD4O60885 1362 aaPredicted RBP10.17□□□□□ -0.78
APOBEC3A-203ENST00000488758 MON2Q7Z3U7 1717 aa10.17□□□□□ -0.78
APOBEC3A-203ENST00000488758 KRT28Q7Z3Y7 464 aa10.16□□□□□ -0.78
APOBEC3A-203ENST00000488758 ABTB2Q8N961 1025 aa10.16□□□□□ -0.78
APOBEC3A-203ENST00000488758 KIF20BQ96Q89 1820 aa10.15□□□□□ -0.78
APOBEC3A-203ENST00000488758 C19orf67A6NJJ6 358 aa10.15□□□□□ -0.78
APOBEC3A-203ENST00000488758 FAM9BQ8IZU0 186 aa10.15□□□□□ -0.78
APOBEC3A-203ENST00000488758 YTHDC1Q96MU7 727 aaKnown RBP10.15□□□□□ -0.78
APOBEC3A-203ENST00000488758 ZRANB1Q9UGI0 708 aa10.15□□□□□ -0.78
APOBEC3A-203ENST00000488758 SSH2Q76I76 1423 aa10.15□□□□□ -0.79
APOBEC3A-203ENST00000488758 NPHP3Q7Z494 1330 aa10.14□□□□□ -0.79
APOBEC3A-203ENST00000488758 MTHFSP49914 203 aa10.14□□□□□ -0.79
APOBEC3A-203ENST00000488758 NLRP6P59044 892 aa10.14□□□□□ -0.79
APOBEC3A-203ENST00000488758 XPCQ01831 940 aaPredicted RBP10.14□□□□□ -0.79
APOBEC3A-203ENST00000488758 CFAP53Q96M91 514 aa10.14□□□□□ -0.79
APOBEC3A-203ENST00000488758 FBXO3Q9UK99 471 aa10.14□□□□□ -0.79
APOBEC3A-203ENST00000488758 KIF1AQ12756 1690 aa10.14□□□□□ -0.79
APOBEC3A-203ENST00000488758 MNX1P50219 401 aaPredicted RBP10.13□□□□□ -0.79
APOBEC3A-203ENST00000488758 NUTM2GQ5VZR2 741 aa10.13□□□□□ -0.79
APOBEC3A-203ENST00000488758 LMOD2Q6P5Q4 547 aa10.13□□□□□ -0.79
APOBEC3A-203ENST00000488758 POTEAQ6S8J7 498 aa10.13□□□□□ -0.79
APOBEC3A-203ENST00000488758 BRINP3Q76B58 766 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms