RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 MTHFSP49914 203 aa26.78■■□□□ 1.88
ATP1A1-208ENST00000488733 ZNF335Q9H4Z2 1342 aaPredicted RBP26.77■■□□□ 1.88
ATP1A1-208ENST00000488733 ACEP12821 1306 aa26.76■■□□□ 1.87
ATP1A1-208ENST00000488733 C19orf44Q9H6X5 657 aa26.76■■□□□ 1.87
ATP1A1-208ENST00000488733 AKAP12Q02952 1782 aa26.75■■□□□ 1.87
ATP1A1-208ENST00000488733 MON2Q7Z3U7 1717 aa26.75■■□□□ 1.87
ATP1A1-208ENST00000488733 RGPD8O14715 1765 aaPredicted RBP26.74■■□□□ 1.87
ATP1A1-208ENST00000488733 FKBP8Q14318 412 aa26.73■■□□□ 1.87
ATP1A1-208ENST00000488733 PMFBP1Q8TBY8 1022 aa26.73■■□□□ 1.87
ATP1A1-208ENST00000488733 NGEFQ8N5V2 710 aa26.72■■□□□ 1.87
ATP1A1-208ENST00000488733 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.71■■□□□ 1.87
ATP1A1-208ENST00000488733 DCCP43146 1447 aa26.71■■□□□ 1.87
ATP1A1-208ENST00000488733 SENP3-EIF4A1A0A087X0R7 540 aa26.7■■□□□ 1.87
ATP1A1-208ENST00000488733 USP6P35125 1406 aa26.7■■□□□ 1.87
ATP1A1-208ENST00000488733 NGDNQ8NEJ9 315 aaKnown RBP26.7■■□□□ 1.86
ATP1A1-208ENST00000488733 SALL2Q9Y467 1007 aaPredicted RBP26.7■■□□□ 1.86
ATP1A1-208ENST00000488733 SHPRHQ149N8 1683 aa26.7■■□□□ 1.86
ATP1A1-208ENST00000488733 LRRC7Q96NW7 1537 aa26.7■■□□□ 1.86
ATP1A1-208ENST00000488733 NRKQ7Z2Y5 1582 aa26.67■■□□□ 1.86
ATP1A1-208ENST00000488733 MSH6P52701 1360 aa26.67■■□□□ 1.86
ATP1A1-208ENST00000488733 ATF3P18847 181 aa26.67■■□□□ 1.86
ATP1A1-208ENST00000488733 PHF8Q9UPP1 1060 aa26.67■■□□□ 1.86
ATP1A1-208ENST00000488733 ESCO1Q5FWF5 840 aa26.65■■□□□ 1.86
ATP1A1-208ENST00000488733 TTC21BQ7Z4L5 1316 aa26.64■■□□□ 1.86
ATP1A1-208ENST00000488733 XIRP1Q702N8 1843 aaKnown RBP26.64■■□□□ 1.86
ATP1A1-208ENST00000488733 SSH2Q76I76 1423 aa26.64■■□□□ 1.85
ATP1A1-208ENST00000488733 NME9Q86XW9 330 aa26.64■■□□□ 1.85
ATP1A1-208ENST00000488733 C1orf167Q5SNV9 1468 aa26.63■■□□□ 1.85
ATP1A1-208ENST00000488733 ERICH6BQ5W0A0 696 aa26.62■■□□□ 1.85
ATP1A1-208ENST00000488733 CADPS2Q86UW7 1296 aa26.62■■□□□ 1.85
ATP1A1-208ENST00000488733 CCDC146Q8IYE0 955 aa26.62■■□□□ 1.85
ATP1A1-208ENST00000488733 MST1RQ04912 1400 aa26.62■■□□□ 1.85
ATP1A1-208ENST00000488733 COG3Q96JB2 828 aa26.62■■□□□ 1.85
ATP1A1-208ENST00000488733 PNPLA6Q8IY17 1366 aa26.61■■□□□ 1.85
ATP1A1-208ENST00000488733 APAF1O14727 1248 aa26.6■■□□□ 1.85
ATP1A1-208ENST00000488733 RUNDC1Q96C34 613 aa26.6■■□□□ 1.85
ATP1A1-208ENST00000488733 ORAI2Q96SN7 254 aa26.6■■□□□ 1.85
ATP1A1-208ENST00000488733 AATKQ6ZMQ8 1374 aa26.6■■□□□ 1.85
ATP1A1-208ENST00000488733 TTC21AQ8NDW8 1320 aa26.59■■□□□ 1.85
ATP1A1-208ENST00000488733 ZNF521Q96K83 1311 aa26.59■■□□□ 1.85
ATP1A1-208ENST00000488733 COL3A1P02461 1466 aaPredicted RBP26.59■■□□□ 1.85
ATP1A1-208ENST00000488733 RNF123Q5XPI4 1314 aa26.56■■□□□ 1.84
ATP1A1-208ENST00000488733 POLKQ9UBT6 870 aa26.56■■□□□ 1.84
ATP1A1-208ENST00000488733 ZRANB1Q9UGI0 708 aa26.56■■□□□ 1.84
ATP1A1-208ENST00000488733 GOLGA2Q08379 1002 aa26.56■■□□□ 1.84
ATP1A1-208ENST00000488733 NCBP3Q53F19 620 aaKnown RBP26.56■■□□□ 1.84
ATP1A1-208ENST00000488733 CDCA7LQ96GN5 454 aa26.56■■□□□ 1.84
ATP1A1-208ENST00000488733 DIAPH1O60610 1272 aaKnown RBP26.55■■□□□ 1.84
ATP1A1-208ENST00000488733 U2AF1L5P0DN76 240 aaPredicted RBP26.55■■□□□ 1.84
ATP1A1-208ENST00000488733 U2AF1Q01081 240 aaKnown RBP eCLIP26.55■■□□□ 1.84
ATP1A1-208ENST00000488733 KIF1AQ12756 1690 aa26.54■■□□□ 1.84
ATP1A1-208ENST00000488733 OVOS2A0A0J9YW53 1432 aa26.53■■□□□ 1.84
ATP1A1-208ENST00000488733 OVOS2Q6IE36 1432 aa26.53■■□□□ 1.84
ATP1A1-208ENST00000488733 MAP2P11137 1827 aaKnown RBP26.52■■□□□ 1.84
ATP1A1-208ENST00000488733 PSME1Q06323 249 aa26.52■■□□□ 1.84
ATP1A1-208ENST00000488733 AEBP2Q6ZN18 517 aaPredicted RBP26.52■■□□□ 1.84
ATP1A1-208ENST00000488733 PNNQ9H307 717 aaKnown RBP26.52■■□□□ 1.84
ATP1A1-208ENST00000488733 FOXO3O43524 673 aa26.51■■□□□ 1.83
ATP1A1-208ENST00000488733 RCAN3Q9UKA8 241 aa26.5■■□□□ 1.83
ATP1A1-208ENST00000488733 U2SURPO15042 1029 aaKnown RBP26.49■■□□□ 1.83
ATP1A1-208ENST00000488733 CDK12Q9NYV4 1490 aaPredicted RBP26.49■■□□□ 1.83
ATP1A1-208ENST00000488733 PIK3C2AO00443 1686 aa26.49■■□□□ 1.83
ATP1A1-208ENST00000488733 PAK3O75914 559 aaPredicted RBP26.48■■□□□ 1.83
ATP1A1-208ENST00000488733 TCP11L2Q8N4U5 519 aa26.48■■□□□ 1.83
ATP1A1-208ENST00000488733 USP31Q70CQ4 1352 aa26.48■■□□□ 1.83
ATP1A1-208ENST00000488733 IQSEC2Q5JU85 1478 aa26.48■■□□□ 1.83
ATP1A1-208ENST00000488733 LTBP4Q8N2S1 1624 aa26.48■■□□□ 1.83
ATP1A1-208ENST00000488733 SLFN5Q08AF3 891 aa26.47■■□□□ 1.83
ATP1A1-208ENST00000488733 PPM1GO15355 546 aaPredicted RBP26.46■■□□□ 1.83
ATP1A1-208ENST00000488733 CCDC27Q2M243 656 aa26.46■■□□□ 1.83
ATP1A1-208ENST00000488733 DUSP27Q5VZP5 1158 aa26.45■■□□□ 1.83
ATP1A1-208ENST00000488733 TRMT2AQ8IZ69 625 aaKnown RBP26.45■■□□□ 1.83
ATP1A1-208ENST00000488733 E9PSI1 815 aa26.45■■□□□ 1.82
ATP1A1-208ENST00000488733 IRX6P78412 446 aaPredicted RBP26.45■■□□□ 1.82
ATP1A1-208ENST00000488733 WWC1Q8IX03 1113 aa26.45■■□□□ 1.82
ATP1A1-208ENST00000488733 FBLN1P23142 703 aa26.44■■□□□ 1.82
ATP1A1-208ENST00000488733 XPCQ01831 940 aaPredicted RBP26.44■■□□□ 1.82
ATP1A1-208ENST00000488733 ABTB2Q8N961 1025 aa26.44■■□□□ 1.82
ATP1A1-208ENST00000488733 SLAIN2Q9P270 581 aa26.44■■□□□ 1.82
ATP1A1-208ENST00000488733 EMILIN1Q9Y6C2 1016 aa26.44■■□□□ 1.82
ATP1A1-208ENST00000488733 NLRP6P59044 892 aa26.43■■□□□ 1.82
ATP1A1-208ENST00000488733 PELP1Q8IZL8 1130 aaKnown RBP26.43■■□□□ 1.82
ATP1A1-208ENST00000488733 PHF23Q9BUL5 403 aaPredicted RBP26.43■■□□□ 1.82
ATP1A1-208ENST00000488733 FCHSD2O94868 740 aa26.42■■□□□ 1.82
ATP1A1-208ENST00000488733 KRT28Q7Z3Y7 464 aa26.42■■□□□ 1.82
ATP1A1-208ENST00000488733 PLEKHF1Q96S99 279 aa26.42■■□□□ 1.82
ATP1A1-208ENST00000488733 BRINP3Q76B58 766 aa26.41■■□□□ 1.82
ATP1A1-208ENST00000488733 WDR63Q8IWG1 891 aa26.41■■□□□ 1.82
ATP1A1-208ENST00000488733 NPHP3Q7Z494 1330 aa26.41■■□□□ 1.82
ATP1A1-208ENST00000488733 USP54Q70EL1 1684 aa26.4■■□□□ 1.82
ATP1A1-208ENST00000488733 MAPK8IP3Q9UPT6 1336 aa26.4■■□□□ 1.82
ATP1A1-208ENST00000488733 NUTM2GQ5VZR2 741 aa26.39■■□□□ 1.82
ATP1A1-208ENST00000488733 TRPM3Q9HCF6 1732 aaPredicted RBP26.39■■□□□ 1.82
ATP1A1-208ENST00000488733 RRS1Q15050 365 aaKnown RBP26.39■■□□□ 1.81
ATP1A1-208ENST00000488733 IL13P35225 146 aa26.38■■□□□ 1.81
ATP1A1-208ENST00000488733 RRP1P56182 461 aaKnown RBP26.38■■□□□ 1.81
ATP1A1-208ENST00000488733 PPP4R2Q9NY27 417 aa26.38■■□□□ 1.81
ATP1A1-208ENST00000488733 NEUROD2Q15784 382 aa26.37■■□□□ 1.81
ATP1A1-208ENST00000488733 MARF1Q9Y4F3 1742 aaKnown RBP26.37■■□□□ 1.81
ATP1A1-208ENST00000488733 DDX17Q92841 729 aaKnown RBP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms