RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 TOPAZ1Q8N9V7 1692 aa16.27■□□□□ 0.19
PCYT1A-215ENST00000488235 ACEP12821 1306 aa16.26■□□□□ 0.19
PCYT1A-215ENST00000488235 SEPT12Q8IYM1 358 aa16.26■□□□□ 0.19
PCYT1A-215ENST00000488235 BTG4Q9NY30 223 aa16.26■□□□□ 0.19
PCYT1A-215ENST00000488235 BRWD3Q6RI45 1802 aa16.26■□□□□ 0.19
PCYT1A-215ENST00000488235 POLR3AO14802 1390 aaPredicted RBP16.26■□□□□ 0.19
PCYT1A-215ENST00000488235 NUTM2GQ5VZR2 741 aa16.25■□□□□ 0.19
PCYT1A-215ENST00000488235 CCDC9Q9Y3X0 531 aaKnown RBP16.25■□□□□ 0.19
PCYT1A-215ENST00000488235 ITSN1Q15811 1721 aa16.25■□□□□ 0.19
PCYT1A-215ENST00000488235 ONECUT3O60422 494 aaPredicted RBP16.24■□□□□ 0.19
PCYT1A-215ENST00000488235 CABP2Q9NPB3 220 aa16.24■□□□□ 0.19
PCYT1A-215ENST00000488235 CCDC61Q9Y6R9 512 aa16.24■□□□□ 0.19
PCYT1A-215ENST00000488235 CENPJQ9HC77 1338 aaPredicted RBP16.23■□□□□ 0.19
PCYT1A-215ENST00000488235 PLEKHG3A1L390 1219 aa16.23■□□□□ 0.19
PCYT1A-215ENST00000488235 NEUROD1Q13562 356 aa16.23■□□□□ 0.19
PCYT1A-215ENST00000488235 NBPF8Q3BBV2 869 aa16.23■□□□□ 0.19
PCYT1A-215ENST00000488235 COL14A1Q05707 1796 aaKnown RBP16.22■□□□□ 0.19
PCYT1A-215ENST00000488235 KIAA0232Q92628 1395 aa16.22■□□□□ 0.19
PCYT1A-215ENST00000488235 CHRNA2Q15822 529 aa16.21■□□□□ 0.19
PCYT1A-215ENST00000488235 FAM98CQ17RN3 349 aaKnown RBP16.21■□□□□ 0.19
PCYT1A-215ENST00000488235 QRICH2Q9H0J4 1663 aa16.21■□□□□ 0.18
PCYT1A-215ENST00000488235 PHRF1Q9P1Y6 1649 aaKnown RBP16.2■□□□□ 0.18
PCYT1A-215ENST00000488235 SRPK2P78362 688 aaKnown RBP16.2■□□□□ 0.18
PCYT1A-215ENST00000488235 PPIP5K1Q6PFW1 1433 aa16.19■□□□□ 0.18
PCYT1A-215ENST00000488235 TRPM1Q7Z4N2 1603 aa16.19■□□□□ 0.18
PCYT1A-215ENST00000488235 ZC3H6P61129 1189 aaKnown RBP16.19■□□□□ 0.18
PCYT1A-215ENST00000488235 PRDM11Q9NQV5 511 aa16.19■□□□□ 0.18
PCYT1A-215ENST00000488235 SPATA31A5Q5VU36 1347 aa16.19■□□□□ 0.18
PCYT1A-215ENST00000488235 SPATA31A7Q8IWB4 1347 aa16.19■□□□□ 0.18
PCYT1A-215ENST00000488235 DEFB132Q7Z7B7 95 aa16.18■□□□□ 0.18
PCYT1A-215ENST00000488235 KRT27Q7Z3Y8 459 aa16.17■□□□□ 0.18
PCYT1A-215ENST00000488235 BLMP54132 1417 aaPredicted RBP16.17■□□□□ 0.18
PCYT1A-215ENST00000488235 NRKQ7Z2Y5 1582 aa16.17■□□□□ 0.18
PCYT1A-215ENST00000488235 A0A0G2JS52 829 aa16.16■□□□□ 0.18
PCYT1A-215ENST00000488235 MYT1Q01538 1121 aa16.16■□□□□ 0.18
PCYT1A-215ENST00000488235 FAM182BQ5T319 152 aa16.16■□□□□ 0.18
PCYT1A-215ENST00000488235 CCDC125Q86Z20 511 aa16.16■□□□□ 0.18
PCYT1A-215ENST00000488235 ABTB2Q8N961 1025 aa16.16■□□□□ 0.18
PCYT1A-215ENST00000488235 CABP1Q9NZU7 370 aa16.16■□□□□ 0.18
PCYT1A-215ENST00000488235 USP19O94966 1318 aa16.16■□□□□ 0.18
PCYT1A-215ENST00000488235 ROCK2O75116 1388 aaKnown RBP16.14■□□□□ 0.17
PCYT1A-215ENST00000488235 STRN4Q9NRL3 753 aa16.14■□□□□ 0.17
PCYT1A-215ENST00000488235 THSD7AQ9UPZ6 1657 aa16.14■□□□□ 0.17
PCYT1A-215ENST00000488235 CAMTA1Q9Y6Y1 1673 aa16.13■□□□□ 0.17
PCYT1A-215ENST00000488235 SPATA31A1Q5TZJ5 1347 aa16.13■□□□□ 0.17
PCYT1A-215ENST00000488235 USP6P35125 1406 aa16.12■□□□□ 0.17
PCYT1A-215ENST00000488235 SSH2Q76I76 1423 aa16.12■□□□□ 0.17
PCYT1A-215ENST00000488235 LMO7Q8WWI1 1683 aa16.11■□□□□ 0.17
PCYT1A-215ENST00000488235 CPDO75976 1380 aa16.11■□□□□ 0.17
PCYT1A-215ENST00000488235 GCP02774 474 aa16.1■□□□□ 0.17
PCYT1A-215ENST00000488235 LARP1Q6PKG0 1096 aaKnown RBP16.1■□□□□ 0.17
PCYT1A-215ENST00000488235 USP35Q9P2H5 1018 aa16.1■□□□□ 0.17
PCYT1A-215ENST00000488235 ZRANB1Q9UGI0 708 aa16.1■□□□□ 0.17
PCYT1A-215ENST00000488235 EVC2Q86UK5 1308 aa16.09■□□□□ 0.17
PCYT1A-215ENST00000488235 PIK3C2AO00443 1686 aa16.08■□□□□ 0.17
PCYT1A-215ENST00000488235 NLRP13Q86W25 1043 aa16.08■□□□□ 0.16
PCYT1A-215ENST00000488235 SLIT3O75094 1523 aa16.06■□□□□ 0.16
PCYT1A-215ENST00000488235 COL5A2P05997 1499 aaPredicted RBP16.06■□□□□ 0.16
PCYT1A-215ENST00000488235 NLRP6P59044 892 aa16.06■□□□□ 0.16
PCYT1A-215ENST00000488235 BRD4O60885 1362 aaPredicted RBP16.05■□□□□ 0.16
PCYT1A-215ENST00000488235 TTC21BQ7Z4L5 1316 aa16.05■□□□□ 0.16
PCYT1A-215ENST00000488235 ZBTB7CA1YPR0 619 aa16.05■□□□□ 0.16
PCYT1A-215ENST00000488235 EVA1CP58658 441 aa16.05■□□□□ 0.16
PCYT1A-215ENST00000488235 SF3B2Q13435 895 aaKnown RBP16.05■□□□□ 0.16
PCYT1A-215ENST00000488235 CPSF1Q10570 1443 aaKnown RBP16.04■□□□□ 0.16
PCYT1A-215ENST00000488235 EN1Q05925 392 aaPredicted RBP16.04■□□□□ 0.16
PCYT1A-215ENST00000488235 CARD11Q9BXL7 1154 aa16.04■□□□□ 0.16
PCYT1A-215ENST00000488235 BARGINQ6ZT62 677 aa16.03■□□□□ 0.16
PCYT1A-215ENST00000488235 AXIN2Q9Y2T1 843 aa16.03■□□□□ 0.16
PCYT1A-215ENST00000488235 TCP11L2Q8N4U5 519 aa16.02■□□□□ 0.16
PCYT1A-215ENST00000488235 AKAP12Q02952 1782 aa16.02■□□□□ 0.15
PCYT1A-215ENST00000488235 CD163L1Q9NR16 1453 aa16.02■□□□□ 0.15
PCYT1A-215ENST00000488235 TNS1Q9HBL0 1735 aaKnown RBP16.02■□□□□ 0.15
PCYT1A-215ENST00000488235 AATKQ6ZMQ8 1374 aa16.01■□□□□ 0.15
PCYT1A-215ENST00000488235 SBNO2Q9Y2G9 1366 aa16.01■□□□□ 0.15
PCYT1A-215ENST00000488235 COL18A1P39060 1754 aa16.01■□□□□ 0.15
PCYT1A-215ENST00000488235 TRIM37O94972 964 aa16.01■□□□□ 0.15
PCYT1A-215ENST00000488235 BAG6P46379 1132 aa16.01■□□□□ 0.15
PCYT1A-215ENST00000488235 TONSLQ96HA7 1378 aa16■□□□□ 0.15
PCYT1A-215ENST00000488235 PSDA5PKW4 1024 aaPredicted RBP16■□□□□ 0.15
PCYT1A-215ENST00000488235 SOX12O15370 315 aa16■□□□□ 0.15
PCYT1A-215ENST00000488235 ZNF692Q9BU19 519 aaPredicted RBP16■□□□□ 0.15
PCYT1A-215ENST00000488235 RGPD1P0DJD0 1748 aa15.99■□□□□ 0.15
PCYT1A-215ENST00000488235 ARHGEF25Q86VW2 580 aa15.99■□□□□ 0.15
PCYT1A-215ENST00000488235 DISP2A7MBM2 1401 aa15.99■□□□□ 0.15
PCYT1A-215ENST00000488235 KTN1Q86UP2 1357 aaKnown RBP15.99■□□□□ 0.15
PCYT1A-215ENST00000488235 NFAT5O94916 1531 aa15.99■□□□□ 0.15
PCYT1A-215ENST00000488235 CRB1P82279 1406 aa15.98■□□□□ 0.15
PCYT1A-215ENST00000488235 TRIM26Q12899 539 aaPredicted RBP15.98■□□□□ 0.15
PCYT1A-215ENST00000488235 EZH2Q15910 746 aaKnown RBP15.98■□□□□ 0.15
PCYT1A-215ENST00000488235 MON2Q7Z3U7 1717 aa15.97■□□□□ 0.15
PCYT1A-215ENST00000488235 FAM196AQ6ZSG2 479 aa15.97■□□□□ 0.15
PCYT1A-215ENST00000488235 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.97■□□□□ 0.15
PCYT1A-215ENST00000488235 SLC12A5Q9H2X9 1139 aa15.97■□□□□ 0.15
PCYT1A-215ENST00000488235 TTC21AQ8NDW8 1320 aa15.96■□□□□ 0.15
PCYT1A-215ENST00000488235 PDE3BQ13370 1112 aa15.96■□□□□ 0.15
PCYT1A-215ENST00000488235 NME9Q86XW9 330 aa15.96■□□□□ 0.15
PCYT1A-215ENST00000488235 CAMKK2Q96RR4 588 aa15.96■□□□□ 0.15
PCYT1A-215ENST00000488235 THRAP3Q9Y2W1 955 aaKnown RBP15.96■□□□□ 0.15
PCYT1A-215ENST00000488235 PARP4Q9UKK3 1724 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms