RNA–Protein interactions for RNA: ENST00000488179.6

SSR2-212, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-212ENST00000488179 GJD4Q96KN9 370 aaPredicted RBP11.91□□□□□ -0.5
SSR2-212ENST00000488179 CDK12Q9NYV4 1490 aaPredicted RBP11.9□□□□□ -0.5
SSR2-212ENST00000488179 ABCA3Q99758 1704 aa11.9□□□□□ -0.5
SSR2-212ENST00000488179 FAM83GA6ND36 823 aa11.89□□□□□ -0.51
SSR2-212ENST00000488179 NBPF8Q3BBV2 869 aa11.89□□□□□ -0.51
SSR2-212ENST00000488179 ATRNO75882 1429 aa11.89□□□□□ -0.51
SSR2-212ENST00000488179 ALS2Q96Q42 1657 aa11.89□□□□□ -0.51
SSR2-212ENST00000488179 ABTB2Q8N961 1025 aa11.89□□□□□ -0.51
SSR2-212ENST00000488179 BTG4Q9NY30 223 aa11.89□□□□□ -0.51
SSR2-212ENST00000488179 PLCH1Q4KWH8 1693 aa11.88□□□□□ -0.51
SSR2-212ENST00000488179 PRDM11Q9NQV5 511 aa11.88□□□□□ -0.51
SSR2-212ENST00000488179 PPIP5K1Q6PFW1 1433 aa11.88□□□□□ -0.51
SSR2-212ENST00000488179 EVC2Q86UK5 1308 aa11.87□□□□□ -0.51
SSR2-212ENST00000488179 ZC3H6P61129 1189 aaKnown RBP11.87□□□□□ -0.51
SSR2-212ENST00000488179 CARD11Q9BXL7 1154 aa11.87□□□□□ -0.51
SSR2-212ENST00000488179 PCGF6Q9BYE7 350 aa11.87□□□□□ -0.51
SSR2-212ENST00000488179 CABP1Q9NZU7 370 aa11.87□□□□□ -0.51
SSR2-212ENST00000488179 SLIT2O94813 1529 aa11.86□□□□□ -0.51
SSR2-212ENST00000488179 ZBTB7CA1YPR0 619 aa11.86□□□□□ -0.51
SSR2-212ENST00000488179 CHRNA2Q15822 529 aa11.86□□□□□ -0.51
SSR2-212ENST00000488179 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.86□□□□□ -0.51
SSR2-212ENST00000488179 TOPAZ1Q8N9V7 1692 aa11.86□□□□□ -0.51
SSR2-212ENST00000488179 PLEKHG3A1L390 1219 aa11.86□□□□□ -0.51
SSR2-212ENST00000488179 RALGAPBQ86X10 1494 aa11.85□□□□□ -0.51
SSR2-212ENST00000488179 NWD2Q9ULI1 1742 aa11.85□□□□□ -0.51
SSR2-212ENST00000488179 POLR3AO14802 1390 aaPredicted RBP11.84□□□□□ -0.51
SSR2-212ENST00000488179 ATAD2Q6PL18 1390 aa11.84□□□□□ -0.51
SSR2-212ENST00000488179 STRN4Q9NRL3 753 aa11.84□□□□□ -0.51
SSR2-212ENST00000488179 BRWD3Q6RI45 1802 aa11.84□□□□□ -0.51
SSR2-212ENST00000488179 VPS72Q15906 364 aa11.83□□□□□ -0.52
SSR2-212ENST00000488179 KIAA0232Q92628 1395 aa11.83□□□□□ -0.52
SSR2-212ENST00000488179 GLI3P10071 1580 aa11.83□□□□□ -0.52
SSR2-212ENST00000488179 COL14A1Q05707 1796 aaKnown RBP11.83□□□□□ -0.52
SSR2-212ENST00000488179 FAM98CQ17RN3 349 aaKnown RBP11.83□□□□□ -0.52
SSR2-212ENST00000488179 SEPT12Q8IYM1 358 aa11.83□□□□□ -0.52
SSR2-212ENST00000488179 USP35Q9P2H5 1018 aa11.83□□□□□ -0.52
SSR2-212ENST00000488179 EVA1CP58658 441 aa11.82□□□□□ -0.52
SSR2-212ENST00000488179 NLRP6P59044 892 aa11.82□□□□□ -0.52
SSR2-212ENST00000488179 NLRP13Q86W25 1043 aa11.82□□□□□ -0.52
SSR2-212ENST00000488179 TMC1Q8TDI8 760 aa11.82□□□□□ -0.52
SSR2-212ENST00000488179 CRYBG1Q9Y4K1 1723 aa11.82□□□□□ -0.52
SSR2-212ENST00000488179 PHRF1Q9P1Y6 1649 aaKnown RBP11.81□□□□□ -0.52
SSR2-212ENST00000488179 SOX12O15370 315 aa11.81□□□□□ -0.52
SSR2-212ENST00000488179 NRAPQ86VF7 1730 aa11.79□□□□□ -0.52
SSR2-212ENST00000488179 GCP02774 474 aa11.79□□□□□ -0.52
SSR2-212ENST00000488179 USP6P35125 1406 aa11.78□□□□□ -0.52
SSR2-212ENST00000488179 KRT27Q7Z3Y8 459 aa11.78□□□□□ -0.52
SSR2-212ENST00000488179 SF3B2Q13435 895 aaKnown RBP11.77□□□□□ -0.52
SSR2-212ENST00000488179 FAM182BQ5T319 152 aa11.77□□□□□ -0.52
SSR2-212ENST00000488179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.77□□□□□ -0.52
SSR2-212ENST00000488179 ZNF692Q9BU19 519 aaPredicted RBP11.77□□□□□ -0.52
SSR2-212ENST00000488179 KTN1Q86UP2 1357 aaKnown RBP11.77□□□□□ -0.53
SSR2-212ENST00000488179 SPATA31A5Q5VU36 1347 aa11.76□□□□□ -0.53
SSR2-212ENST00000488179 SPATA31A7Q8IWB4 1347 aa11.76□□□□□ -0.53
SSR2-212ENST00000488179 AKAP12Q02952 1782 aa11.76□□□□□ -0.53
SSR2-212ENST00000488179 ST20-MTHFSA0A0A6YYL1 179 aa11.76□□□□□ -0.53
SSR2-212ENST00000488179 NRKQ7Z2Y5 1582 aa11.76□□□□□ -0.53
SSR2-212ENST00000488179 LARP1Q6PKG0 1096 aaKnown RBP11.75□□□□□ -0.53
SSR2-212ENST00000488179 SLC12A5Q9H2X9 1139 aa11.75□□□□□ -0.53
SSR2-212ENST00000488179 TTC21BQ7Z4L5 1316 aa11.75□□□□□ -0.53
SSR2-212ENST00000488179 ONECUT3O60422 494 aaPredicted RBP11.74□□□□□ -0.53
SSR2-212ENST00000488179 CCDC125Q86Z20 511 aa11.74□□□□□ -0.53
SSR2-212ENST00000488179 USP19O94966 1318 aa11.74□□□□□ -0.53
SSR2-212ENST00000488179 PIK3C2AO00443 1686 aa11.74□□□□□ -0.53
SSR2-212ENST00000488179 HDGFL2Q7Z4V5 671 aaPredicted RBP11.74□□□□□ -0.53
SSR2-212ENST00000488179 DEFB132Q7Z7B7 95 aa11.74□□□□□ -0.53
SSR2-212ENST00000488179 CCER1Q8TC90 406 aaPredicted RBP11.74□□□□□ -0.53
SSR2-212ENST00000488179 CAMTA1Q9Y6Y1 1673 aa11.74□□□□□ -0.53
SSR2-212ENST00000488179 SPATA31A1Q5TZJ5 1347 aa11.74□□□□□ -0.53
SSR2-212ENST00000488179 BRD4O60885 1362 aaPredicted RBP11.73□□□□□ -0.53
SSR2-212ENST00000488179 SBNO2Q9Y2G9 1366 aa11.73□□□□□ -0.53
SSR2-212ENST00000488179 ZRANB1Q9UGI0 708 aa11.72□□□□□ -0.53
SSR2-212ENST00000488179 CPDO75976 1380 aa11.72□□□□□ -0.53
SSR2-212ENST00000488179 SSH2Q76I76 1423 aa11.72□□□□□ -0.53
SSR2-212ENST00000488179 RGPD5Q99666 1765 aa11.72□□□□□ -0.53
SSR2-212ENST00000488179 PDE3BQ13370 1112 aa11.72□□□□□ -0.53
SSR2-212ENST00000488179 TOM1L2Q6ZVM7 507 aa11.72□□□□□ -0.53
SSR2-212ENST00000488179 TERF2IPQ9NYB0 399 aa11.72□□□□□ -0.53
SSR2-212ENST00000488179 TTC21AQ8NDW8 1320 aa11.71□□□□□ -0.53
SSR2-212ENST00000488179 BLMP54132 1417 aaPredicted RBP11.71□□□□□ -0.53
SSR2-212ENST00000488179 CSB-PGBD3P0DP91 1061 aa11.71□□□□□ -0.54
SSR2-212ENST00000488179 NME9Q86XW9 330 aa11.71□□□□□ -0.54
SSR2-212ENST00000488179 TCP11L2Q8N4U5 519 aa11.71□□□□□ -0.54
SSR2-212ENST00000488179 KCNH5Q8NCM2 988 aa11.71□□□□□ -0.54
SSR2-212ENST00000488179 MON2Q7Z3U7 1717 aa11.7□□□□□ -0.54
SSR2-212ENST00000488179 USP47Q96K76 1375 aa11.7□□□□□ -0.54
SSR2-212ENST00000488179 KAT6BQ8WYB5 2073 aa11.7□□□□□ -0.54
SSR2-212ENST00000488179 CPSF1Q10570 1443 aaKnown RBP11.7□□□□□ -0.54
SSR2-212ENST00000488179 TESK2Q96S53 571 aa11.69□□□□□ -0.54
SSR2-212ENST00000488179 LMO7Q8WWI1 1683 aa11.69□□□□□ -0.54
SSR2-212ENST00000488179 COL5A2P05997 1499 aaPredicted RBP11.69□□□□□ -0.54
SSR2-212ENST00000488179 BAG6P46379 1132 aa11.69□□□□□ -0.54
SSR2-212ENST00000488179 TMF1P82094 1093 aa11.69□□□□□ -0.54
SSR2-212ENST00000488179 AXIN2Q9Y2T1 843 aa11.69□□□□□ -0.54
SSR2-212ENST00000488179 SLIT3O75094 1523 aa11.68□□□□□ -0.54
SSR2-212ENST00000488179 A0A1W2PP64 1363 aa11.68□□□□□ -0.54
SSR2-212ENST00000488179 AATKQ6ZMQ8 1374 aa11.68□□□□□ -0.54
SSR2-212ENST00000488179 TRIM37O94972 964 aa11.68□□□□□ -0.54
SSR2-212ENST00000488179 POLR3GLQ9BT43 218 aa11.68□□□□□ -0.54
SSR2-212ENST00000488179 THSD7AQ9UPZ6 1657 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms