RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 FOXK2Q01167 660 aa6.98□□□□□ -1.29
HFM1-208ENST00000488023 GUCA2AQ02747 115 aa6.98□□□□□ -1.29
HFM1-208ENST00000488023 ARXQ96QS3 562 aa6.98□□□□□ -1.29
HFM1-208ENST00000488023 PTCRAQ6ISU1 281 aaPredicted RBP6.97□□□□□ -1.29
HFM1-208ENST00000488023 SYMPKQ92797 1274 aaKnown RBP6.97□□□□□ -1.29
HFM1-208ENST00000488023 CNTNAP3BQ96NU0 1288 aa6.97□□□□□ -1.29
HFM1-208ENST00000488023 CNTNAP3Q9BZ76 1288 aa6.97□□□□□ -1.29
HFM1-208ENST00000488023 ZNF385CQ66K41 422 aaPredicted RBP6.96□□□□□ -1.29
HFM1-208ENST00000488023 GPR161Q8N6U8 529 aaKnown RBP6.96□□□□□ -1.29
HFM1-208ENST00000488023 MINK1Q8N4C8 1332 aaPredicted RBP6.96□□□□□ -1.3
HFM1-208ENST00000488023 ADAM23O75077 832 aa6.96□□□□□ -1.3
HFM1-208ENST00000488023 KRTAP4-8A0A0G2JLE6 195 aa6.95□□□□□ -1.3
HFM1-208ENST00000488023 TIMP2P16035 220 aa6.95□□□□□ -1.3
HFM1-208ENST00000488023 SH3BP2P78314 561 aa6.94□□□□□ -1.3
HFM1-208ENST00000488023 NNTQ13423 1086 aa6.94□□□□□ -1.3
HFM1-208ENST00000488023 LCE3BQ5TA77 95 aa6.94□□□□□ -1.3
HFM1-208ENST00000488023 NUDT12Q9BQG2 462 aa6.94□□□□□ -1.3
HFM1-208ENST00000488023 TLL2Q9Y6L7 1015 aa6.94□□□□□ -1.3
HFM1-208ENST00000488023 MAN1A2O60476 641 aa6.93□□□□□ -1.3
HFM1-208ENST00000488023 KANK3Q6NY19 840 aa6.93□□□□□ -1.3
HFM1-208ENST00000488023 RETREG3Q86VR2 466 aa6.93□□□□□ -1.3
HFM1-208ENST00000488023 FAM217BQ9NTX9 383 aaPredicted RBP6.93□□□□□ -1.3
HFM1-208ENST00000488023 CCDC102AQ96A19 550 aa6.93□□□□□ -1.3
HFM1-208ENST00000488023 GPCPD1Q9NPB8 672 aa6.93□□□□□ -1.3
HFM1-208ENST00000488023 ARHGEF15O94989 841 aa6.92□□□□□ -1.3
HFM1-208ENST00000488023 CLCN1P35523 988 aa6.92□□□□□ -1.3
HFM1-208ENST00000488023 WDR4P57081 412 aaKnown RBP6.92□□□□□ -1.3
HFM1-208ENST00000488023 NUTM1Q86Y26 1132 aa6.92□□□□□ -1.3
HFM1-208ENST00000488023 KLF16Q9BXK1 252 aaPredicted RBP6.92□□□□□ -1.3
HFM1-208ENST00000488023 ADH1CP00326 375 aa6.9□□□□□ -1.3
HFM1-208ENST00000488023 SVOPQ8N4V2 548 aa6.9□□□□□ -1.3
HFM1-208ENST00000488023 WHAMMQ8TF30 809 aa6.9□□□□□ -1.3
HFM1-208ENST00000488023 PCDHGC3Q9UN70 934 aa6.9□□□□□ -1.3
HFM1-208ENST00000488023 PLEKHG3A1L390 1219 aa6.9□□□□□ -1.31
HFM1-208ENST00000488023 FDX1P10109 184 aa6.9□□□□□ -1.31
HFM1-208ENST00000488023 MPNDQ8N594 471 aa6.9□□□□□ -1.31
HFM1-208ENST00000488023 COL25A1Q9BXS0 654 aaPredicted RBP6.9□□□□□ -1.31
HFM1-208ENST00000488023 C6orf229H3BNL8 230 aa6.89□□□□□ -1.31
HFM1-208ENST00000488023 CCNYL3P0C7X3 344 aa6.89□□□□□ -1.31
HFM1-208ENST00000488023 MS4A1P11836 297 aa6.89□□□□□ -1.31
HFM1-208ENST00000488023 KRTAP9-9Q9BYP9 154 aa6.89□□□□□ -1.31
HFM1-208ENST00000488023 KRTAP9-4Q9BYQ2 154 aa6.89□□□□□ -1.31
HFM1-208ENST00000488023 MARSP56192 900 aaKnown RBP6.88□□□□□ -1.31
HFM1-208ENST00000488023 C6orf118Q5T5N4 469 aa6.88□□□□□ -1.31
HFM1-208ENST00000488023 RNFT1Q5M7Z0 435 aa6.87□□□□□ -1.31
HFM1-208ENST00000488023 KRI1Q8N9T8 703 aaKnown RBP6.87□□□□□ -1.31
HFM1-208ENST00000488023 ZC3H15Q8WU90 426 aaKnown RBP6.87□□□□□ -1.31
HFM1-208ENST00000488023 UNC93B1Q9H1C4 597 aa6.87□□□□□ -1.31
HFM1-208ENST00000488023 EVA1BQ9NVM1 165 aa6.87□□□□□ -1.31
HFM1-208ENST00000488023 MSTNO14793 375 aa6.87□□□□□ -1.31
HFM1-208ENST00000488023 PTPRNQ16849 979 aa6.87□□□□□ -1.31
HFM1-208ENST00000488023 TMEM132AQ24JP5 1023 aa6.87□□□□□ -1.31
HFM1-208ENST00000488023 SCARF2Q96GP6 870 aaPredicted RBP6.87□□□□□ -1.31
HFM1-208ENST00000488023 SLURP2P0DP57 97 aa6.86□□□□□ -1.31
HFM1-208ENST00000488023 LINC01559Q495D7 138 aa6.86□□□□□ -1.31
HFM1-208ENST00000488023 BAP1Q92560 729 aa6.86□□□□□ -1.31
HFM1-208ENST00000488023 NDUFV2P19404 249 aa6.85□□□□□ -1.31
HFM1-208ENST00000488023 VARSP26640 1264 aaKnown RBP6.85□□□□□ -1.31
HFM1-208ENST00000488023 KCNH2Q12809 1159 aa6.85□□□□□ -1.31
HFM1-208ENST00000488023 SPIRE2Q8WWL2 714 aa6.85□□□□□ -1.31
HFM1-208ENST00000488023 ZFAND3Q9H8U3 227 aa6.85□□□□□ -1.31
HFM1-208ENST00000488023 DNMT3LQ9UJW3 386 aa6.85□□□□□ -1.31
HFM1-208ENST00000488023 SSTR3P32745 418 aaPredicted RBP6.84□□□□□ -1.31
HFM1-208ENST00000488023 PLA2G4EQ3MJ16 856 aa6.84□□□□□ -1.31
HFM1-208ENST00000488023 BARGINQ6ZT62 677 aa6.84□□□□□ -1.31
HFM1-208ENST00000488023 SPOCK3Q9BQ16 436 aa6.84□□□□□ -1.31
HFM1-208ENST00000488023 SOS2Q07890 1332 aaPredicted RBP6.84□□□□□ -1.31
HFM1-208ENST00000488023 ZMYND10O75800 440 aa6.84□□□□□ -1.32
HFM1-208ENST00000488023 ITGB2P05107 769 aa6.84□□□□□ -1.32
HFM1-208ENST00000488023 Q8N3U1 123 aa6.84□□□□□ -1.32
HFM1-208ENST00000488023 ZNF511Q8NB15 262 aa6.84□□□□□ -1.32
HFM1-208ENST00000488023 PRR7Q8TB68 274 aa6.84□□□□□ -1.32
HFM1-208ENST00000488023 NANOS1Q8WY41 292 aaKnown RBP6.84□□□□□ -1.32
HFM1-208ENST00000488023 MOXD2PA6NHM9 499 aa6.83□□□□□ -1.32
HFM1-208ENST00000488023 ZIC2O95409 532 aaPredicted RBP6.83□□□□□ -1.32
HFM1-208ENST00000488023 BMP2P12643 396 aa6.83□□□□□ -1.32
HFM1-208ENST00000488023 ERICH6Q7L0X2 663 aa6.83□□□□□ -1.32
HFM1-208ENST00000488023 HOMEZQ8IX15 550 aa6.83□□□□□ -1.32
HFM1-208ENST00000488023 DESI1Q6ICB0 168 aa6.81□□□□□ -1.32
HFM1-208ENST00000488023 C14orf37Q86TY3 774 aa6.81□□□□□ -1.32
HFM1-208ENST00000488023 ITPKCQ96DU7 683 aa6.81□□□□□ -1.32
HFM1-208ENST00000488023 BTBD11A6QL63 1104 aa6.81□□□□□ -1.32
HFM1-208ENST00000488023 MTMR2Q13614 643 aa6.81□□□□□ -1.32
HFM1-208ENST00000488023 LINC00528Q8N1L1 170 aa6.81□□□□□ -1.32
HFM1-208ENST00000488023 SPDYE5A6NIY4 337 aa6.8□□□□□ -1.32
HFM1-208ENST00000488023 PROCP04070 461 aa6.8□□□□□ -1.32
HFM1-208ENST00000488023 PTSQ03393 145 aa6.8□□□□□ -1.32
HFM1-208ENST00000488023 DCAF5Q96JK2 942 aa6.79□□□□□ -1.32
HFM1-208ENST00000488023 UPP2O95045 317 aa6.78□□□□□ -1.32
HFM1-208ENST00000488023 NR3C2P08235 984 aa6.78□□□□□ -1.32
HFM1-208ENST00000488023 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.78□□□□□ -1.323e-9■■■■□ 20.1
HFM1-208ENST00000488023 MEIOBQ8N635 442 aa6.78□□□□□ -1.32
HFM1-208ENST00000488023 CDK15Q96Q40 435 aa6.78□□□□□ -1.32
HFM1-208ENST00000488023 K7ELQ4 463 aaPredicted RBP6.77□□□□□ -1.32
HFM1-208ENST00000488023 CTHP32929 405 aa6.77□□□□□ -1.32
HFM1-208ENST00000488023 LYPD4Q6UWN0 246 aa6.77□□□□□ -1.32
HFM1-208ENST00000488023 LYPD8Q6UX82 237 aa6.77□□□□□ -1.32
HFM1-208ENST00000488023 FAM174AQ8TBP5 190 aa6.77□□□□□ -1.32
HFM1-208ENST00000488023 KRTAP4-12Q9BQ66 201 aa6.77□□□□□ -1.32
HFM1-208ENST00000488023 TTLL12Q14166 644 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms