RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 NPATQ14207 1427 aa11.77□□□□□ -0.52
NECTIN3-209ENST00000488016 FAM135AQ9P2D6 1515 aa11.77□□□□□ -0.52
NECTIN3-209ENST00000488016 LTBP4Q8N2S1 1624 aa11.77□□□□□ -0.53
NECTIN3-209ENST00000488016 GCC2Q8IWJ2 1684 aa11.77□□□□□ -0.53
NECTIN3-209ENST00000488016 TNRQ92752 1358 aa11.77□□□□□ -0.53
NECTIN3-209ENST00000488016 ERVK-7P63135 1459 aa11.76□□□□□ -0.53
NECTIN3-209ENST00000488016 CEP170BQ9Y4F5 1589 aaPredicted RBP11.76□□□□□ -0.53
NECTIN3-209ENST00000488016 KANK1Q14678 1352 aa11.76□□□□□ -0.53
NECTIN3-209ENST00000488016 SETD1BQ9UPS6 1966 aaKnown RBP11.76□□□□□ -0.53
NECTIN3-209ENST00000488016 E2F4Q16254 413 aa11.75□□□□□ -0.53
NECTIN3-209ENST00000488016 EFCAB6Q5THR3 1501 aa11.75□□□□□ -0.53
NECTIN3-209ENST00000488016 LMTK2Q8IWU2 1503 aa11.75□□□□□ -0.53
NECTIN3-209ENST00000488016 ZNF142P52746 1687 aaPredicted RBP11.75□□□□□ -0.53
NECTIN3-209ENST00000488016 HFM1A2PYH4 1435 aa11.73□□□□□ -0.53
NECTIN3-209ENST00000488016 PTPRTO14522 1441 aa11.73□□□□□ -0.53
NECTIN3-209ENST00000488016 NUP155O75694 1391 aa11.73□□□□□ -0.53
NECTIN3-209ENST00000488016 IQGAP3Q86VI3 1631 aa11.73□□□□□ -0.53
NECTIN3-209ENST00000488016 STAC3Q96MF2 364 aa11.73□□□□□ -0.53
NECTIN3-209ENST00000488016 ADAM33Q9BZ11 813 aa11.73□□□□□ -0.53
NECTIN3-209ENST00000488016 SYNMO15061 1565 aa11.72□□□□□ -0.53
NECTIN3-209ENST00000488016 A2ML1A8K2U0 1454 aa11.72□□□□□ -0.53
NECTIN3-209ENST00000488016 UBAP1LF5GYI3 381 aa11.72□□□□□ -0.53
NECTIN3-209ENST00000488016 PHF14O94880 888 aa11.72□□□□□ -0.53
NECTIN3-209ENST00000488016 TYW1BQ6NUM6 668 aa11.72□□□□□ -0.53
NECTIN3-209ENST00000488016 FBXW7Q969H0 707 aa11.72□□□□□ -0.53
NECTIN3-209ENST00000488016 PCDHGA10Q9Y5H3 936 aa11.72□□□□□ -0.53
NECTIN3-209ENST00000488016 E9PCH4 1651 aa11.71□□□□□ -0.53
NECTIN3-209ENST00000488016 TET3O43151 1660 aa11.71□□□□□ -0.53
NECTIN3-209ENST00000488016 UGGT1Q9NYU2 1555 aa11.71□□□□□ -0.53
NECTIN3-209ENST00000488016 ARHGAP31Q2M1Z3 1444 aa11.71□□□□□ -0.53
NECTIN3-209ENST00000488016 PIK3C2BO00750 1634 aa11.69□□□□□ -0.54
NECTIN3-209ENST00000488016 EPAS1Q99814 870 aa11.69□□□□□ -0.54
NECTIN3-209ENST00000488016 TSHZ2Q9NRE2 1034 aa11.69□□□□□ -0.54
NECTIN3-209ENST00000488016 NOS1P29475 1434 aa11.69□□□□□ -0.54
NECTIN3-209ENST00000488016 SPDYE16A6NNV3 312 aaPredicted RBP11.68□□□□□ -0.54
NECTIN3-209ENST00000488016 PDIA6Q15084 440 aa11.68□□□□□ -0.54
NECTIN3-209ENST00000488016 TRIM52Q96A61 297 aa11.68□□□□□ -0.54
NECTIN3-209ENST00000488016 SLC4A5Q9BY07 1137 aa11.68□□□□□ -0.54
NECTIN3-209ENST00000488016 VPS9D1Q9Y2B5 631 aa11.68□□□□□ -0.54
NECTIN3-209ENST00000488016 IQSEC2Q5JU85 1478 aa11.68□□□□□ -0.54
NECTIN3-209ENST00000488016 NLRP1Q9C000 1473 aa11.68□□□□□ -0.54
NECTIN3-209ENST00000488016 UBR1Q8IWV7 1749 aa11.67□□□□□ -0.54
NECTIN3-209ENST00000488016 HRO43593 1189 aa11.67□□□□□ -0.54
NECTIN3-209ENST00000488016 ZNF335Q9H4Z2 1342 aaPredicted RBP11.66□□□□□ -0.54
NECTIN3-209ENST00000488016 IDI1Q13907 227 aa11.66□□□□□ -0.54
NECTIN3-209ENST00000488016 DDX12PQ92771 950 aa11.66□□□□□ -0.54
NECTIN3-209ENST00000488016 MED1Q15648 1581 aaPredicted RBP11.66□□□□□ -0.54
NECTIN3-209ENST00000488016 HSPA1LP34931 641 aa11.65□□□□□ -0.54
NECTIN3-209ENST00000488016 NEURL4Q96JN8 1562 aa11.65□□□□□ -0.54
NECTIN3-209ENST00000488016 RAB3GAP2Q9H2M9 1393 aa11.65□□□□□ -0.55
NECTIN3-209ENST00000488016 SETD5Q9C0A6 1442 aa11.64□□□□□ -0.55
NECTIN3-209ENST00000488016 PPP1R3GB7ZBB8 358 aa11.64□□□□□ -0.55
NECTIN3-209ENST00000488016 ZBED2Q9BTP6 218 aa11.64□□□□□ -0.55
NECTIN3-209ENST00000488016 ARIH1Q9Y4X5 557 aaPredicted RBP11.64□□□□□ -0.55
NECTIN3-209ENST00000488016 MYO5BQ9ULV0 1848 aa11.64□□□□□ -0.55
NECTIN3-209ENST00000488016 PLA2R1Q13018 1463 aa11.63□□□□□ -0.55
NECTIN3-209ENST00000488016 RPRD2Q5VT52 1461 aaKnown RBP11.63□□□□□ -0.55
NECTIN3-209ENST00000488016 POLR1AO95602 1720 aaPredicted RBP11.63□□□□□ -0.55
NECTIN3-209ENST00000488016 ADGRB3O60242 1522 aa11.62□□□□□ -0.55
NECTIN3-209ENST00000488016 SPHKAPQ2M3C7 1700 aa11.62□□□□□ -0.55
NECTIN3-209ENST00000488016 LTKP29376 864 aa11.61□□□□□ -0.55
NECTIN3-209ENST00000488016 PIP4K2BP78356 416 aa11.61□□□□□ -0.55
NECTIN3-209ENST00000488016 NBR1Q14596 966 aa11.61□□□□□ -0.55
NECTIN3-209ENST00000488016 RBM33Q96EV2 1170 aaKnown RBP11.61□□□□□ -0.55
NECTIN3-209ENST00000488016 CLTCL1P53675 1640 aa11.6□□□□□ -0.55
NECTIN3-209ENST00000488016 NUTM2DQ5VT03 806 aaPredicted RBP11.6□□□□□ -0.55
NECTIN3-209ENST00000488016 THEMISQ8N1K5 641 aaPredicted RBP11.6□□□□□ -0.55
NECTIN3-209ENST00000488016 ARHGAP23Q9P227 1491 aa11.59□□□□□ -0.55
NECTIN3-209ENST00000488016 PLCB2Q00722 1185 aa11.59□□□□□ -0.55
NECTIN3-209ENST00000488016 C6orf132Q5T0Z8 1188 aa11.59□□□□□ -0.55
NECTIN3-209ENST00000488016 KCTD12Q96CX2 325 aaKnown RBP11.59□□□□□ -0.55
NECTIN3-209ENST00000488016 NBPF3Q9H094 633 aa11.59□□□□□ -0.55
NECTIN3-209ENST00000488016 TMEM131LA2VDJ0 1609 aa11.59□□□□□ -0.55
NECTIN3-209ENST00000488016 TMEM2Q9UHN6 1383 aa11.58□□□□□ -0.56
NECTIN3-209ENST00000488016 GOLGA8CPA6NN73 597 aa11.58□□□□□ -0.56
NECTIN3-209ENST00000488016 MPHOSPH9Q99550 1183 aa11.58□□□□□ -0.56
NECTIN3-209ENST00000488016 HCSTQ9UBK5 93 aa11.58□□□□□ -0.56
NECTIN3-209ENST00000488016 SLIT1O75093 1534 aa11.58□□□□□ -0.56
NECTIN3-209ENST00000488016 NPHP4O75161 1426 aaPredicted RBP11.58□□□□□ -0.56
NECTIN3-209ENST00000488016 SCAF11Q99590 1463 aaKnown RBP11.57□□□□□ -0.56
NECTIN3-209ENST00000488016 TRPM2O94759 1503 aa11.57□□□□□ -0.56
NECTIN3-209ENST00000488016 MAP3K7O43318 606 aa11.57□□□□□ -0.56
NECTIN3-209ENST00000488016 COL9A1P20849 921 aa11.57□□□□□ -0.56
NECTIN3-209ENST00000488016 TXNDC2Q86VQ3 553 aa11.57□□□□□ -0.56
NECTIN3-209ENST00000488016 ANKLE2Q86XL3 938 aa11.57□□□□□ -0.56
NECTIN3-209ENST00000488016 MRPL50Q8N5N7 158 aaKnown RBP11.57□□□□□ -0.56
NECTIN3-209ENST00000488016 SLC52A1Q9NWF4 448 aa11.57□□□□□ -0.56
NECTIN3-209ENST00000488016 IQGAP1P46940 1657 aa11.56□□□□□ -0.56
NECTIN3-209ENST00000488016 GRXCR2A6NFK2 248 aa11.56□□□□□ -0.56
NECTIN3-209ENST00000488016 EN1Q05925 392 aaPredicted RBP11.56□□□□□ -0.56
NECTIN3-209ENST00000488016 ZFYVE9O95405 1425 aa11.55□□□□□ -0.56
NECTIN3-209ENST00000488016 RIMS2Q9UQ26 1411 aa11.55□□□□□ -0.56
NECTIN3-209ENST00000488016 BHMG1C9JSJ3 638 aaPredicted RBP11.55□□□□□ -0.56
NECTIN3-209ENST00000488016 PROX2Q3B8N5 592 aa11.55□□□□□ -0.56
NECTIN3-209ENST00000488016 KDM5AP29375 1690 aaKnown RBP11.55□□□□□ -0.56
NECTIN3-209ENST00000488016 MED14O60244 1454 aa11.54□□□□□ -0.56
NECTIN3-209ENST00000488016 RABGEF1Q9UJ41 708 aa11.53□□□□□ -0.56
NECTIN3-209ENST00000488016 STRCP1A6NGW2 1772 aa11.53□□□□□ -0.56
NECTIN3-209ENST00000488016 ZNF326Q5BKZ1 582 aaKnown RBP11.52□□□□□ -0.57
NECTIN3-209ENST00000488016 ARHGEF1Q92888 912 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms