RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 SIN3AQ96ST3 1273 aa29.24■■■□□ 2.27
TRIM8-204ENST00000487927 VPS72Q15906 364 aa29.23■■■□□ 2.27
TRIM8-204ENST00000487927 QRICH2Q9H0J4 1663 aa29.21■■■□□ 2.27
TRIM8-204ENST00000487927 COL14A1Q05707 1796 aaKnown RBP29.21■■■□□ 2.27
TRIM8-204ENST00000487927 TRPM1Q7Z4N2 1603 aa29.2■■■□□ 2.27
TRIM8-204ENST00000487927 EP400Q96L91 3159 aa29.2■■■□□ 2.27
TRIM8-204ENST00000487927 PAK3O75914 559 aaPredicted RBP29.2■■■□□ 2.26
TRIM8-204ENST00000487927 POLR3AO14802 1390 aaPredicted RBP29.2■■■□□ 2.26
TRIM8-204ENST00000487927 CENPJQ9HC77 1338 aaPredicted RBP29.19■■■□□ 2.26
TRIM8-204ENST00000487927 PHRF1Q9P1Y6 1649 aaKnown RBP29.18■■■□□ 2.26
TRIM8-204ENST00000487927 CCDC61Q9Y6R9 512 aa29.17■■■□□ 2.26
TRIM8-204ENST00000487927 ACEP12821 1306 aa29.17■■■□□ 2.26
TRIM8-204ENST00000487927 PLEKHG3A1L390 1219 aa29.16■■■□□ 2.26
TRIM8-204ENST00000487927 NBPF8Q3BBV2 869 aa29.14■■■□□ 2.26
TRIM8-204ENST00000487927 BTG4Q9NY30 223 aa29.14■■■□□ 2.26
TRIM8-204ENST00000487927 ONECUT3O60422 494 aaPredicted RBP29.13■■■□□ 2.25
TRIM8-204ENST00000487927 NEUROD1Q13562 356 aa29.13■■■□□ 2.25
TRIM8-204ENST00000487927 SEPT12Q8IYM1 358 aa29.13■■■□□ 2.25
TRIM8-204ENST00000487927 ZEB1P37275 1124 aaPredicted RBP29.12■■■□□ 2.25
TRIM8-204ENST00000487927 CCDC9Q9Y3X0 531 aaKnown RBP29.12■■■□□ 2.25
TRIM8-204ENST00000487927 PPIP5K1Q6PFW1 1433 aa29.1■■■□□ 2.25
TRIM8-204ENST00000487927 SRPK2P78362 688 aaKnown RBP29.09■■■□□ 2.25
TRIM8-204ENST00000487927 CABP2Q9NPB3 220 aa29.09■■■□□ 2.25
TRIM8-204ENST00000487927 NUTM2GQ5VZR2 741 aa29.07■■■□□ 2.24
TRIM8-204ENST00000487927 PRDM11Q9NQV5 511 aa29.07■■■□□ 2.24
TRIM8-204ENST00000487927 KIAA0232Q92628 1395 aa29.06■■■□□ 2.24
TRIM8-204ENST00000487927 CCDC125Q86Z20 511 aa29.06■■■□□ 2.24
TRIM8-204ENST00000487927 NRKQ7Z2Y5 1582 aa29.05■■■□□ 2.24
TRIM8-204ENST00000487927 ROCK2O75116 1388 aaKnown RBP29.03■■■□□ 2.24
TRIM8-204ENST00000487927 SPATA31A5Q5VU36 1347 aa29.02■■■□□ 2.24
TRIM8-204ENST00000487927 SPATA31A7Q8IWB4 1347 aa29.02■■■□□ 2.24
TRIM8-204ENST00000487927 FAM98CQ17RN3 349 aaKnown RBP29.02■■■□□ 2.24
TRIM8-204ENST00000487927 BLMP54132 1417 aaPredicted RBP29.02■■■□□ 2.24
TRIM8-204ENST00000487927 CHRNA2Q15822 529 aa29.01■■■□□ 2.23
TRIM8-204ENST00000487927 THSD7AQ9UPZ6 1657 aa29■■■□□ 2.23
TRIM8-204ENST00000487927 ZC3H6P61129 1189 aaKnown RBP29■■■□□ 2.23
TRIM8-204ENST00000487927 KRT27Q7Z3Y8 459 aa29■■■□□ 2.23
TRIM8-204ENST00000487927 ABTB2Q8N961 1025 aa29■■■□□ 2.23
TRIM8-204ENST00000487927 USP19O94966 1318 aa28.99■■■□□ 2.23
TRIM8-204ENST00000487927 CABP1Q9NZU7 370 aa28.99■■■□□ 2.23
TRIM8-204ENST00000487927 USP6P35125 1406 aa28.97■■■□□ 2.23
TRIM8-204ENST00000487927 BRD4O60885 1362 aaPredicted RBP28.97■■■□□ 2.23
TRIM8-204ENST00000487927 EVC2Q86UK5 1308 aa28.96■■■□□ 2.23
TRIM8-204ENST00000487927 LMO7Q8WWI1 1683 aa28.96■■■□□ 2.23
TRIM8-204ENST00000487927 A0A0G2JS52 829 aa28.96■■■□□ 2.23
TRIM8-204ENST00000487927 MYT1Q01538 1121 aa28.96■■■□□ 2.23
TRIM8-204ENST00000487927 CPDO75976 1380 aa28.94■■■□□ 2.22
TRIM8-204ENST00000487927 SPATA31A1Q5TZJ5 1347 aa28.94■■■□□ 2.22
TRIM8-204ENST00000487927 CAMTA1Q9Y6Y1 1673 aa28.93■■■□□ 2.22
TRIM8-204ENST00000487927 SSH2Q76I76 1423 aa28.93■■■□□ 2.22
TRIM8-204ENST00000487927 AKAP12Q02952 1782 aa28.93■■■□□ 2.22
TRIM8-204ENST00000487927 NLRP13Q86W25 1043 aa28.92■■■□□ 2.22
TRIM8-204ENST00000487927 STRN4Q9NRL3 753 aa28.92■■■□□ 2.22
TRIM8-204ENST00000487927 PIK3C2AO00443 1686 aa28.92■■■□□ 2.22
TRIM8-204ENST00000487927 DEFB132Q7Z7B7 95 aa28.91■■■□□ 2.22
TRIM8-204ENST00000487927 GCP02774 474 aa28.89■■■□□ 2.22
TRIM8-204ENST00000487927 SLIT3O75094 1523 aa28.89■■■□□ 2.21
TRIM8-204ENST00000487927 ZRANB1Q9UGI0 708 aa28.88■■■□□ 2.21
TRIM8-204ENST00000487927 SBNO2Q9Y2G9 1366 aa28.86■■■□□ 2.21
TRIM8-204ENST00000487927 SF3B2Q13435 895 aaKnown RBP28.85■■■□□ 2.21
TRIM8-204ENST00000487927 FAM182BQ5T319 152 aa28.85■■■□□ 2.21
TRIM8-204ENST00000487927 CCER1Q8TC90 406 aaPredicted RBP28.85■■■□□ 2.21
TRIM8-204ENST00000487927 RGPD1P0DJD0 1748 aa28.85■■■□□ 2.21
TRIM8-204ENST00000487927 TONSLQ96HA7 1378 aa28.85■■■□□ 2.21
TRIM8-204ENST00000487927 NLRP6P59044 892 aa28.84■■■□□ 2.21
TRIM8-204ENST00000487927 EVA1CP58658 441 aa28.83■■■□□ 2.21
TRIM8-204ENST00000487927 LARP1Q6PKG0 1096 aaKnown RBP28.83■■■□□ 2.21
TRIM8-204ENST00000487927 CARD11Q9BXL7 1154 aa28.83■■■□□ 2.21
TRIM8-204ENST00000487927 CPSF1Q10570 1443 aaKnown RBP28.82■■■□□ 2.2
TRIM8-204ENST00000487927 COL18A1P39060 1754 aa28.81■■■□□ 2.2
TRIM8-204ENST00000487927 MON2Q7Z3U7 1717 aa28.81■■■□□ 2.2
TRIM8-204ENST00000487927 TNS1Q9HBL0 1735 aaKnown RBP28.81■■■□□ 2.2
TRIM8-204ENST00000487927 COL5A2P05997 1499 aaPredicted RBP28.81■■■□□ 2.2
TRIM8-204ENST00000487927 USP35Q9P2H5 1018 aa28.81■■■□□ 2.2
TRIM8-204ENST00000487927 TTC21BQ7Z4L5 1316 aa28.8■■■□□ 2.2
TRIM8-204ENST00000487927 ZNF692Q9BU19 519 aaPredicted RBP28.8■■■□□ 2.2
TRIM8-204ENST00000487927 BARGINQ6ZT62 677 aa28.79■■■□□ 2.2
TRIM8-204ENST00000487927 AATKQ6ZMQ8 1374 aa28.76■■■□□ 2.2
TRIM8-204ENST00000487927 CLSPNQ9HAW4 1339 aa28.75■■■□□ 2.19
TRIM8-204ENST00000487927 BAG6P46379 1132 aa28.75■■■□□ 2.19
TRIM8-204ENST00000487927 TCP11L2Q8N4U5 519 aa28.75■■■□□ 2.19
TRIM8-204ENST00000487927 KTN1Q86UP2 1357 aaKnown RBP28.75■■■□□ 2.19
TRIM8-204ENST00000487927 PARP4Q9UKK3 1724 aaKnown RBP28.74■■■□□ 2.19
TRIM8-204ENST00000487927 TTC21AQ8NDW8 1320 aa28.74■■■□□ 2.19
TRIM8-204ENST00000487927 SRCAPQ6ZRS2 3230 aa28.74■■■□□ 2.19
TRIM8-204ENST00000487927 CD163L1Q9NR16 1453 aa28.74■■■□□ 2.19
TRIM8-204ENST00000487927 ZBTB7CA1YPR0 619 aa28.74■■■□□ 2.19
TRIM8-204ENST00000487927 RGPD5Q99666 1765 aa28.73■■■□□ 2.19
TRIM8-204ENST00000487927 CRB1P82279 1406 aa28.72■■■□□ 2.19
TRIM8-204ENST00000487927 DISP2A7MBM2 1401 aa28.71■■■□□ 2.19
TRIM8-204ENST00000487927 THRAP3Q9Y2W1 955 aaKnown RBP28.71■■■□□ 2.19
TRIM8-204ENST00000487927 USP54Q70EL1 1684 aa28.7■■■□□ 2.19
TRIM8-204ENST00000487927 NFAT5O94916 1531 aa28.7■■■□□ 2.19
TRIM8-204ENST00000487927 FAM196AQ6ZSG2 479 aa28.7■■■□□ 2.18
TRIM8-204ENST00000487927 EN1Q05925 392 aaPredicted RBP28.69■■■□□ 2.18
TRIM8-204ENST00000487927 AXIN2Q9Y2T1 843 aa28.69■■■□□ 2.18
TRIM8-204ENST00000487927 ARHGEF25Q86VW2 580 aa28.68■■■□□ 2.18
TRIM8-204ENST00000487927 WNK3Q9BYP7 1800 aa28.68■■■□□ 2.18
TRIM8-204ENST00000487927 KCNH5Q8NCM2 988 aa28.67■■■□□ 2.18
TRIM8-204ENST00000487927 PDE3BQ13370 1112 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms