RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 PROCP04070 461 aa8.97□□□□□ -0.97
USP9X-208ENST00000487625 ZFAND3Q9H8U3 227 aa8.97□□□□□ -0.97
USP9X-208ENST00000487625 LINC01559Q495D7 138 aa8.96□□□□□ -0.98
USP9X-208ENST00000487625 SOS2Q07890 1332 aaPredicted RBP8.96□□□□□ -0.98
USP9X-208ENST00000487625 KDM4AO75164 1064 aa8.95□□□□□ -0.98
USP9X-208ENST00000487625 CD46P15529 392 aa8.95□□□□□ -0.98
USP9X-208ENST00000487625 NANOS1Q8WY41 292 aaKnown RBP8.95□□□□□ -0.98
USP9X-208ENST00000487625 GNPATO15228 680 aa8.94□□□□□ -0.98
USP9X-208ENST00000487625 ZIC2O95409 532 aaPredicted RBP8.94□□□□□ -0.98
USP9X-208ENST00000487625 LCE3BQ5TA77 95 aa8.94□□□□□ -0.98
USP9X-208ENST00000487625 KCNV2Q8TDN2 545 aa8.94□□□□□ -0.98
USP9X-208ENST00000487625 SYMPKQ92797 1274 aaKnown RBP8.94□□□□□ -0.98
USP9X-208ENST00000487625 BMP2P12643 396 aa8.93□□□□□ -0.98
USP9X-208ENST00000487625 VARSP26640 1264 aaKnown RBP8.93□□□□□ -0.98
USP9X-208ENST00000487625 ITPKCQ96DU7 683 aa8.93□□□□□ -0.98
USP9X-208ENST00000487625 DCAF5Q96JK2 942 aa8.93□□□□□ -0.98
USP9X-208ENST00000487625 K7ELQ4 463 aaPredicted RBP8.92□□□□□ -0.98
USP9X-208ENST00000487625 GUCA2AQ02747 115 aa8.92□□□□□ -0.98
USP9X-208ENST00000487625 LINC00528Q8N1L1 170 aa8.92□□□□□ -0.98
USP9X-208ENST00000487625 BAP1Q92560 729 aa8.92□□□□□ -0.98
USP9X-208ENST00000487625 UNC93B1Q9H1C4 597 aa8.91□□□□□ -0.98
USP9X-208ENST00000487625 GPR37O15354 613 aa8.9□□□□□ -0.98
USP9X-208ENST00000487625 HOXA2O43364 376 aa8.9□□□□□ -0.98
USP9X-208ENST00000487625 CCNYL3P0C7X3 344 aa8.9□□□□□ -0.98
USP9X-208ENST00000487625 PTSQ03393 145 aa8.9□□□□□ -0.98
USP9X-208ENST00000487625 ZNF511Q8NB15 262 aa8.9□□□□□ -0.98
USP9X-208ENST00000487625 KRTAP4-12Q9BQ66 201 aa8.9□□□□□ -0.98
USP9X-208ENST00000487625 LYPD4Q6UWN0 246 aa8.89□□□□□ -0.99
USP9X-208ENST00000487625 MEIOBQ8N635 442 aa8.89□□□□□ -0.99
USP9X-208ENST00000487625 NR3C2P08235 984 aa8.88□□□□□ -0.99
USP9X-208ENST00000487625 USP46P62068 366 aa8.88□□□□□ -0.99
USP9X-208ENST00000487625 RETREG3Q86VR2 466 aa8.87□□□□□ -0.99
USP9X-208ENST00000487625 GALNT6Q8NCL4 622 aa8.87□□□□□ -0.99
USP9X-208ENST00000487625 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.86□□□□□ -0.99
USP9X-208ENST00000487625 UPP2O95045 317 aa8.85□□□□□ -0.99
USP9X-208ENST00000487625 CCDC155Q8N6L0 562 aa8.85□□□□□ -0.99
USP9X-208ENST00000487625 CDK15Q96Q40 435 aa8.85□□□□□ -0.99
USP9X-208ENST00000487625 ADAMTS2O95450 1211 aa8.84□□□□□ -0.99
USP9X-208ENST00000487625 MS4A1P11836 297 aa8.84□□□□□ -0.99
USP9X-208ENST00000487625 EVA1BQ9NVM1 165 aa8.84□□□□□ -0.99
USP9X-208ENST00000487625 SEMA3EO15041 775 aa8.83□□□□□ -1
USP9X-208ENST00000487625 RBM26Q5T8P6 1007 aaKnown RBP8.83□□□□□ -1
USP9X-208ENST00000487625 VWA5B2Q8N398 1253 aa8.83□□□□□ -1
USP9X-208ENST00000487625 KRTAP9-9Q9BYP9 154 aa8.83□□□□□ -1
USP9X-208ENST00000487625 KRTAP9-4Q9BYQ2 154 aa8.83□□□□□ -1
USP9X-208ENST00000487625 CNTNAP5Q8WYK1 1306 aa8.82□□□□□ -1
USP9X-208ENST00000487625 PTPRNQ16849 979 aa8.82□□□□□ -1
USP9X-208ENST00000487625 FAM174AQ8TBP5 190 aa8.82□□□□□ -1
USP9X-208ENST00000487625 CELA2BP08218 269 aaPredicted RBP8.81□□□□□ -1
USP9X-208ENST00000487625 KCNH2Q12809 1159 aa8.81□□□□□ -1
USP9X-208ENST00000487625 TTLL8A6PVC2 850 aa8.8□□□□□ -1
USP9X-208ENST00000487625 PHF20L1A8MW92 1017 aa8.8□□□□□ -1
USP9X-208ENST00000487625 MAP3K10Q02779 954 aa8.8□□□□□ -1
USP9X-208ENST00000487625 CDC14CA4D256 554 aa8.79□□□□□ -1
USP9X-208ENST00000487625 SLC35F4A4IF30 521 aa8.79□□□□□ -1
USP9X-208ENST00000487625 ITGA6P23229 1130 aa8.79□□□□□ -1
USP9X-208ENST00000487625 BAG6P46379 1132 aa8.79□□□□□ -1
USP9X-208ENST00000487625 NR5A1Q13285 461 aa8.79□□□□□ -1
USP9X-208ENST00000487625 ARID5BQ14865 1188 aa8.79□□□□□ -1
USP9X-208ENST00000487625 FIGNL2A6NMB9 653 aa8.78□□□□□ -1
USP9X-208ENST00000487625 GRM5P41594 1212 aa8.78□□□□□ -1
USP9X-208ENST00000487625 SV2AQ7L0J3 742 aa8.78□□□□□ -1
USP9X-208ENST00000487625 CFAP44Q96MT7 982 aa8.78□□□□□ -1
USP9X-208ENST00000487625 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.78□□□□□ -1
USP9X-208ENST00000487625 PAXIP1Q6ZW49 1069 aaPredicted RBP8.77□□□□□ -1.01
USP9X-208ENST00000487625 SRSF11Q05519 484 aaKnown RBP8.76□□□□□ -1.01
USP9X-208ENST00000487625 TSEN34Q9BSV6 310 aaKnown RBP8.76□□□□□ -1.01
USP9X-208ENST00000487625 KRTAP4-8A0A0G2JLE6 195 aa8.75□□□□□ -1.01
USP9X-208ENST00000487625 SPTLC1O15269 473 aa8.75□□□□□ -1.01
USP9X-208ENST00000487625 FURINP09958 794 aa8.75□□□□□ -1.01
USP9X-208ENST00000487625 SH3RF1Q7Z6J0 888 aa8.75□□□□□ -1.01
USP9X-208ENST00000487625 FOXJ1Q92949 421 aa8.75□□□□□ -1.01
USP9X-208ENST00000487625 PCDHGC3Q9UN70 934 aa8.75□□□□□ -1.01
USP9X-208ENST00000487625 GAS6Q14393 721 aa8.73□□□□□ -1.01
USP9X-208ENST00000487625 ENAMQ9NRM1 1142 aa8.73□□□□□ -1.01
USP9X-208ENST00000487625 C6orf229H3BNL8 230 aa8.72□□□□□ -1.01
USP9X-208ENST00000487625 BEND7Q8N7W2 519 aaPredicted RBP8.72□□□□□ -1.01
USP9X-208ENST00000487625 C4orf48Q5BLP8 95 aa8.7□□□□□ -1.02
USP9X-208ENST00000487625 PODNQ7Z5L7 613 aa8.69□□□□□ -1.02
USP9X-208ENST00000487625 KRBA1A5PL33 1030 aa8.68□□□□□ -1.02
USP9X-208ENST00000487625 BTBD11A6QL63 1104 aa8.68□□□□□ -1.02
USP9X-208ENST00000487625 FDX1P10109 184 aa8.68□□□□□ -1.02
USP9X-208ENST00000487625 SPINT1O43278 529 aa8.67□□□□□ -1.02
USP9X-208ENST00000487625 FSHRP23945 695 aa8.67□□□□□ -1.02
USP9X-208ENST00000487625 SENP3-EIF4A1A0A087X0R7 540 aa8.66□□□□□ -1.02
USP9X-208ENST00000487625 TESPA1A2RU30 521 aaPredicted RBP8.66□□□□□ -1.02
USP9X-208ENST00000487625 ITGB7P26010 798 aa8.66□□□□□ -1.02
USP9X-208ENST00000487625 MDM2Q00987 491 aaPredicted RBP8.66□□□□□ -1.02
USP9X-208ENST00000487625 PRR7Q8TB68 274 aa8.65□□□□□ -1.02
USP9X-208ENST00000487625 CTHP32929 405 aa8.63□□□□□ -1.03
USP9X-208ENST00000487625 DESI1Q6ICB0 168 aa8.63□□□□□ -1.03
USP9X-208ENST00000487625 KRTAP19-1Q8IUB9 90 aa8.63□□□□□ -1.03
USP9X-208ENST00000487625 NEDD1Q8NHV4 660 aa8.63□□□□□ -1.03
USP9X-208ENST00000487625 CUEDC1Q9NWM3 386 aaPredicted RBP8.63□□□□□ -1.03
USP9X-208ENST00000487625 EMILIN1Q9Y6C2 1016 aa8.63□□□□□ -1.03
USP9X-208ENST00000487625 CBLBQ13191 982 aa8.62□□□□□ -1.03
USP9X-208ENST00000487625 NUTM1Q86Y26 1132 aa8.62□□□□□ -1.03
USP9X-208ENST00000487625 BCRP11274 1271 aa8.61□□□□□ -1.03
USP9X-208ENST00000487625 CTSOP43234 321 aaPredicted RBP8.6□□□□□ -1.03
USP9X-208ENST00000487625 Q6ZVU0 165 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms