RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 ITSN1Q15811 1721 aa9.67□□□□□ -0.86
CCNB3-206ENST00000487204 DCCP43146 1447 aa9.66□□□□□ -0.86
CCNB3-206ENST00000487204 POLR3AO14802 1390 aaPredicted RBP9.66□□□□□ -0.86
CCNB3-206ENST00000487204 TTC21AQ8NDW8 1320 aa9.66□□□□□ -0.86
CCNB3-206ENST00000487204 PRR36Q9H6K5 1346 aa9.66□□□□□ -0.86
CCNB3-206ENST00000487204 CFAP53Q96M91 514 aa9.66□□□□□ -0.86
CCNB3-206ENST00000487204 TOPAZ1Q8N9V7 1692 aa9.65□□□□□ -0.86
CCNB3-206ENST00000487204 ACEP12821 1306 aa9.65□□□□□ -0.86
CCNB3-206ENST00000487204 FYB1O15117 783 aa9.65□□□□□ -0.86
CCNB3-206ENST00000487204 FAM9BQ8IZU0 186 aa9.65□□□□□ -0.86
CCNB3-206ENST00000487204 NGDNQ8NEJ9 315 aaKnown RBP9.65□□□□□ -0.86
CCNB3-206ENST00000487204 ATXN8OSP0DMR3 200 aa9.64□□□□□ -0.87
CCNB3-206ENST00000487204 ATF3P18847 181 aa9.64□□□□□ -0.87
CCNB3-206ENST00000487204 WDR43Q15061 677 aaKnown RBP eCLIP9.64□□□□□ -0.87
CCNB3-206ENST00000487204 CCDC184Q52MB2 194 aa9.64□□□□□ -0.87
CCNB3-206ENST00000487204 CADPS2Q86UW7 1296 aa9.64□□□□□ -0.87
CCNB3-206ENST00000487204 COG3Q96JB2 828 aa9.64□□□□□ -0.87
CCNB3-206ENST00000487204 FMN2Q9NZ56 1722 aa9.64□□□□□ -0.87
CCNB3-206ENST00000487204 USP6P35125 1406 aa9.64□□□□□ -0.87
CCNB3-206ENST00000487204 AKAP12Q02952 1782 aa9.63□□□□□ -0.87
CCNB3-206ENST00000487204 MSH6P52701 1360 aa9.63□□□□□ -0.87
CCNB3-206ENST00000487204 MON2Q7Z3U7 1717 aa9.62□□□□□ -0.87
CCNB3-206ENST00000487204 NALCNQ8IZF0 1738 aa9.62□□□□□ -0.87
CCNB3-206ENST00000487204 HNRNPUQ00839 825 aaKnown RBP eCLIP9.62□□□□□ -0.87
CCNB3-206ENST00000487204 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.62□□□□□ -0.87
CCNB3-206ENST00000487204 GGNBP2Q9H3C7 697 aa9.62□□□□□ -0.87
CCNB3-206ENST00000487204 PHF8Q9UPP1 1060 aa9.62□□□□□ -0.87
CCNB3-206ENST00000487204 STRCQ7RTU9 1775 aa9.62□□□□□ -0.87
CCNB3-206ENST00000487204 ANKRD26Q9UPS8 1709 aa9.62□□□□□ -0.87
CCNB3-206ENST00000487204 TMEM94Q12767 1356 aa9.62□□□□□ -0.87
CCNB3-206ENST00000487204 AATKQ6ZMQ8 1374 aa9.62□□□□□ -0.87
CCNB3-206ENST00000487204 TTC21BQ7Z4L5 1316 aa9.61□□□□□ -0.87
CCNB3-206ENST00000487204 NUTM2FA1L443 756 aa9.61□□□□□ -0.87
CCNB3-206ENST00000487204 NGEFQ8N5V2 710 aa9.61□□□□□ -0.87
CCNB3-206ENST00000487204 NUDCQ9Y266 331 aa9.61□□□□□ -0.87
CCNB3-206ENST00000487204 KIF20BQ96Q89 1820 aa9.61□□□□□ -0.87
CCNB3-206ENST00000487204 ZBED9Q6R2W3 1325 aa9.6□□□□□ -0.87
CCNB3-206ENST00000487204 SSH2Q76I76 1423 aa9.6□□□□□ -0.87
CCNB3-206ENST00000487204 MTHFSP49914 203 aa9.6□□□□□ -0.87
CCNB3-206ENST00000487204 ESCO1Q5FWF5 840 aa9.6□□□□□ -0.87
CCNB3-206ENST00000487204 PMFBP1Q8TBY8 1022 aa9.6□□□□□ -0.87
CCNB3-206ENST00000487204 PSME1Q06323 249 aa9.59□□□□□ -0.87
CCNB3-206ENST00000487204 PNNQ9H307 717 aaKnown RBP9.59□□□□□ -0.87
CCNB3-206ENST00000487204 USP31Q70CQ4 1352 aa9.59□□□□□ -0.87
CCNB3-206ENST00000487204 NRKQ7Z2Y5 1582 aa9.58□□□□□ -0.88
CCNB3-206ENST00000487204 ABCB7O75027 752 aa9.58□□□□□ -0.88
CCNB3-206ENST00000487204 TNNT2P45379 298 aaPredicted RBP9.58□□□□□ -0.88
CCNB3-206ENST00000487204 NME9Q86XW9 330 aa9.58□□□□□ -0.88
CCNB3-206ENST00000487204 C1orf167Q5SNV9 1468 aa9.58□□□□□ -0.88
CCNB3-206ENST00000487204 KIF1AQ12756 1690 aa9.58□□□□□ -0.88
CCNB3-206ENST00000487204 RBM33Q96EV2 1170 aaKnown RBP9.57□□□□□ -0.88
CCNB3-206ENST00000487204 PNPLA6Q8IY17 1366 aa9.57□□□□□ -0.88
CCNB3-206ENST00000487204 OVOS2A0A0J9YW53 1432 aa9.56□□□□□ -0.88
CCNB3-206ENST00000487204 BLMP54132 1417 aaPredicted RBP9.56□□□□□ -0.88
CCNB3-206ENST00000487204 OVOS2Q6IE36 1432 aa9.56□□□□□ -0.88
CCNB3-206ENST00000487204 LRRC7Q96NW7 1537 aa9.56□□□□□ -0.88
CCNB3-206ENST00000487204 KIF24Q5T7B8 1368 aa9.56□□□□□ -0.88
CCNB3-206ENST00000487204 PDE3BQ13370 1112 aa9.56□□□□□ -0.88
CCNB3-206ENST00000487204 ADAMTS8Q9UP79 889 aa9.56□□□□□ -0.88
CCNB3-206ENST00000487204 ATF5Q9Y2D1 282 aaPredicted RBP9.56□□□□□ -0.88
CCNB3-206ENST00000487204 MST1RQ04912 1400 aa9.56□□□□□ -0.88
CCNB3-206ENST00000487204 SMG6Q86US8 1419 aaKnown RBP9.56□□□□□ -0.88
CCNB3-206ENST00000487204 NPHP3Q7Z494 1330 aa9.56□□□□□ -0.88
CCNB3-206ENST00000487204 ZNF335Q9H4Z2 1342 aaPredicted RBP9.56□□□□□ -0.88
CCNB3-206ENST00000487204 DIAPH1O60610 1272 aaKnown RBP9.55□□□□□ -0.88
CCNB3-206ENST00000487204 NLRP6P59044 892 aa9.55□□□□□ -0.88
CCNB3-206ENST00000487204 ABTB2Q8N961 1025 aa9.55□□□□□ -0.88
CCNB3-206ENST00000487204 POLKQ9UBT6 870 aa9.55□□□□□ -0.88
CCNB3-206ENST00000487204 STRCP1A6NGW2 1772 aa9.55□□□□□ -0.88
CCNB3-206ENST00000487204 CDK12Q9NYV4 1490 aaPredicted RBP9.54□□□□□ -0.88
CCNB3-206ENST00000487204 PAK3O75914 559 aaPredicted RBP9.54□□□□□ -0.88
CCNB3-206ENST00000487204 KCNH5Q8NCM2 988 aa9.54□□□□□ -0.88
CCNB3-206ENST00000487204 RGPD8O14715 1765 aaPredicted RBP9.54□□□□□ -0.88
CCNB3-206ENST00000487204 USP54Q70EL1 1684 aa9.53□□□□□ -0.88
CCNB3-206ENST00000487204 FOXO3O43524 673 aa9.53□□□□□ -0.88
CCNB3-206ENST00000487204 NEFMP07197 916 aa9.53□□□□□ -0.88
CCNB3-206ENST00000487204 RUNDC1Q96C34 613 aa9.53□□□□□ -0.88
CCNB3-206ENST00000487204 ORAI2Q96SN7 254 aa9.53□□□□□ -0.88
CCNB3-206ENST00000487204 SBNO1A3KN83 1393 aa9.52□□□□□ -0.88
CCNB3-206ENST00000487204 PPM1GO15355 546 aaPredicted RBP9.52□□□□□ -0.89
CCNB3-206ENST00000487204 FCHSD2O94868 740 aa9.52□□□□□ -0.89
CCNB3-206ENST00000487204 U2AF1L5P0DN76 240 aaPredicted RBP9.52□□□□□ -0.89
CCNB3-206ENST00000487204 U2AF1Q01081 240 aaKnown RBP eCLIP9.52□□□□□ -0.89
CCNB3-206ENST00000487204 KRT28Q7Z3Y7 464 aa9.52□□□□□ -0.89
CCNB3-206ENST00000487204 SLAIN2Q9P270 581 aa9.52□□□□□ -0.89
CCNB3-206ENST00000487204 POLA2Q14181 598 aa9.51□□□□□ -0.89
CCNB3-206ENST00000487204 COL3A1P02461 1466 aaPredicted RBP9.51□□□□□ -0.89
CCNB3-206ENST00000487204 RTL1A6NKG5 1358 aa9.5□□□□□ -0.89
CCNB3-206ENST00000487204 ARHGEF10O15013 1369 aa9.5□□□□□ -0.89
CCNB3-206ENST00000487204 FLT4P35916 1363 aa9.5□□□□□ -0.89
CCNB3-206ENST00000487204 U2SURPO15042 1029 aaKnown RBP9.5□□□□□ -0.89
CCNB3-206ENST00000487204 AMPHP49418 695 aa9.5□□□□□ -0.89
CCNB3-206ENST00000487204 ZRANB1Q9UGI0 708 aa9.5□□□□□ -0.89
CCNB3-206ENST00000487204 PIK3C2AO00443 1686 aa9.5□□□□□ -0.89
CCNB3-206ENST00000487204 RRS1Q15050 365 aaKnown RBP9.49□□□□□ -0.89
CCNB3-206ENST00000487204 BRINP3Q76B58 766 aa9.49□□□□□ -0.89
CCNB3-206ENST00000487204 EMILIN1Q9Y6C2 1016 aa9.49□□□□□ -0.89
CCNB3-206ENST00000487204 MAPK8IP3Q9UPT6 1336 aa9.49□□□□□ -0.89
CCNB3-206ENST00000487204 SHPRHQ149N8 1683 aa9.48□□□□□ -0.89
CCNB3-206ENST00000487204 MAP2P11137 1827 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms