RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 NALCNQ8IZF0 1738 aa8.2□□□□□ -1.1
VAMP3-203ENST00000487194 NUTM2FA1L443 756 aa8.2□□□□□ -1.1
VAMP3-203ENST00000487194 MTHFSP49914 203 aa8.2□□□□□ -1.1
VAMP3-203ENST00000487194 NGEFQ8N5V2 710 aa8.19□□□□□ -1.1
VAMP3-203ENST00000487194 PMFBP1Q8TBY8 1022 aa8.19□□□□□ -1.1
VAMP3-203ENST00000487194 CERKQ8TCT0 537 aa8.19□□□□□ -1.1
VAMP3-203ENST00000487194 C19orf44Q9H6X5 657 aa8.19□□□□□ -1.1
VAMP3-203ENST00000487194 ADAMTS8Q9UP79 889 aa8.19□□□□□ -1.1
VAMP3-203ENST00000487194 PHF8Q9UPP1 1060 aa8.19□□□□□ -1.1
VAMP3-203ENST00000487194 NUDCQ9Y266 331 aa8.19□□□□□ -1.1
VAMP3-203ENST00000487194 DMRT2Q9Y5R5 561 aa8.19□□□□□ -1.1
VAMP3-203ENST00000487194 AATKQ6ZMQ8 1374 aa8.19□□□□□ -1.1
VAMP3-203ENST00000487194 SSH2Q76I76 1423 aa8.19□□□□□ -1.1
VAMP3-203ENST00000487194 NRKQ7Z2Y5 1582 aa8.18□□□□□ -1.1
VAMP3-203ENST00000487194 PDE3BQ13370 1112 aa8.18□□□□□ -1.1
VAMP3-203ENST00000487194 NME9Q86XW9 330 aa8.18□□□□□ -1.1
VAMP3-203ENST00000487194 DCCP43146 1447 aa8.18□□□□□ -1.1
VAMP3-203ENST00000487194 TMEM94Q12767 1356 aa8.17□□□□□ -1.1
VAMP3-203ENST00000487194 USP31Q70CQ4 1352 aa8.17□□□□□ -1.1
VAMP3-203ENST00000487194 RGPD8O14715 1765 aaPredicted RBP8.17□□□□□ -1.1
VAMP3-203ENST00000487194 STRCQ7RTU9 1775 aa8.17□□□□□ -1.1
VAMP3-203ENST00000487194 OVOS2A0A0J9YW53 1432 aa8.16□□□□□ -1.1
VAMP3-203ENST00000487194 DIAPH1O60610 1272 aaKnown RBP8.16□□□□□ -1.1
VAMP3-203ENST00000487194 ATF3P18847 181 aa8.16□□□□□ -1.1
VAMP3-203ENST00000487194 ESCO1Q5FWF5 840 aa8.16□□□□□ -1.1
VAMP3-203ENST00000487194 OVOS2Q6IE36 1432 aa8.16□□□□□ -1.1
VAMP3-203ENST00000487194 SMG6Q86US8 1419 aaKnown RBP8.16□□□□□ -1.1
VAMP3-203ENST00000487194 PNPLA6Q8IY17 1366 aa8.16□□□□□ -1.1
VAMP3-203ENST00000487194 RBM33Q96EV2 1170 aaKnown RBP8.16□□□□□ -1.1
VAMP3-203ENST00000487194 PNNQ9H307 717 aaKnown RBP8.16□□□□□ -1.1
VAMP3-203ENST00000487194 MSH6P52701 1360 aa8.15□□□□□ -1.1
VAMP3-203ENST00000487194 PSME1Q06323 249 aa8.15□□□□□ -1.1
VAMP3-203ENST00000487194 NCBP3Q53F19 620 aaKnown RBP8.15□□□□□ -1.1
VAMP3-203ENST00000487194 CADPS2Q86UW7 1296 aa8.15□□□□□ -1.1
VAMP3-203ENST00000487194 POLKQ9UBT6 870 aa8.15□□□□□ -1.1
VAMP3-203ENST00000487194 GTF3C3Q9Y5Q9 886 aa8.15□□□□□ -1.1
VAMP3-203ENST00000487194 SHPRHQ149N8 1683 aa8.14□□□□□ -1.11
VAMP3-203ENST00000487194 COL3A1P02461 1466 aaPredicted RBP8.14□□□□□ -1.11
VAMP3-203ENST00000487194 C1orf167Q5SNV9 1468 aa8.14□□□□□ -1.11
VAMP3-203ENST00000487194 CDK12Q9NYV4 1490 aaPredicted RBP8.14□□□□□ -1.11
VAMP3-203ENST00000487194 U2AF1L5P0DN76 240 aaPredicted RBP8.14□□□□□ -1.11
VAMP3-203ENST00000487194 U2AF1Q01081 240 aaKnown RBP eCLIP8.14□□□□□ -1.11
VAMP3-203ENST00000487194 RUNDC1Q96C34 613 aa8.14□□□□□ -1.11
VAMP3-203ENST00000487194 ZRANB1Q9UGI0 708 aa8.14□□□□□ -1.11
VAMP3-203ENST00000487194 STRCP1A6NGW2 1772 aa8.14□□□□□ -1.11
VAMP3-203ENST00000487194 KIF1AQ12756 1690 aa8.14□□□□□ -1.11
VAMP3-203ENST00000487194 LRRC7Q96NW7 1537 aa8.13□□□□□ -1.11
VAMP3-203ENST00000487194 PPM1GO15355 546 aaPredicted RBP8.13□□□□□ -1.11
VAMP3-203ENST00000487194 NLRP6P59044 892 aa8.13□□□□□ -1.11
VAMP3-203ENST00000487194 MAP2P11137 1827 aaKnown RBP8.13□□□□□ -1.11
VAMP3-203ENST00000487194 MST1RQ04912 1400 aa8.12□□□□□ -1.11
VAMP3-203ENST00000487194 KIF24Q5T7B8 1368 aa8.12□□□□□ -1.11
VAMP3-203ENST00000487194 USP54Q70EL1 1684 aa8.12□□□□□ -1.11
VAMP3-203ENST00000487194 APAF1O14727 1248 aa8.12□□□□□ -1.11
VAMP3-203ENST00000487194 U2SURPO15042 1029 aaKnown RBP8.12□□□□□ -1.11
VAMP3-203ENST00000487194 PAK3O75914 559 aaPredicted RBP8.12□□□□□ -1.11
VAMP3-203ENST00000487194 NEFLP07196 543 aa8.12□□□□□ -1.11
VAMP3-203ENST00000487194 CCDC146Q8IYE0 955 aa8.12□□□□□ -1.11
VAMP3-203ENST00000487194 ABTB2Q8N961 1025 aa8.12□□□□□ -1.11
VAMP3-203ENST00000487194 ORAI2Q96SN7 254 aa8.12□□□□□ -1.11
VAMP3-203ENST00000487194 EMILIN1Q9Y6C2 1016 aa8.12□□□□□ -1.11
VAMP3-203ENST00000487194 PIK3C2AO00443 1686 aa8.11□□□□□ -1.11
VAMP3-203ENST00000487194 MAPK8IP3Q9UPT6 1336 aa8.11□□□□□ -1.11
VAMP3-203ENST00000487194 FCHSD2O94868 740 aa8.11□□□□□ -1.11
VAMP3-203ENST00000487194 NEFMP07197 916 aa8.11□□□□□ -1.11
VAMP3-203ENST00000487194 RRS1Q15050 365 aaKnown RBP8.11□□□□□ -1.11
VAMP3-203ENST00000487194 KCNH5Q8NCM2 988 aa8.11□□□□□ -1.11
VAMP3-203ENST00000487194 SALL2Q9Y467 1007 aaPredicted RBP8.11□□□□□ -1.11
VAMP3-203ENST00000487194 SBNO1A3KN83 1393 aa8.1□□□□□ -1.11
VAMP3-203ENST00000487194 ZNF521Q96K83 1311 aa8.1□□□□□ -1.11
VAMP3-203ENST00000487194 ZNF335Q9H4Z2 1342 aaPredicted RBP8.1□□□□□ -1.11
VAMP3-203ENST00000487194 FOXO3O43524 673 aa8.1□□□□□ -1.11
VAMP3-203ENST00000487194 IL13P35225 146 aa8.1□□□□□ -1.11
VAMP3-203ENST00000487194 GOLGA2Q08379 1002 aa8.1□□□□□ -1.11
VAMP3-203ENST00000487194 CCDC27Q2M243 656 aa8.1□□□□□ -1.11
VAMP3-203ENST00000487194 KRT28Q7Z3Y7 464 aa8.1□□□□□ -1.11
VAMP3-203ENST00000487194 TCP11L2Q8N4U5 519 aa8.1□□□□□ -1.11
VAMP3-203ENST00000487194 FLT4P35916 1363 aa8.1□□□□□ -1.11
VAMP3-203ENST00000487194 NPHP3Q7Z494 1330 aa8.09□□□□□ -1.11
VAMP3-203ENST00000487194 IQSEC2Q5JU85 1478 aa8.09□□□□□ -1.11
VAMP3-203ENST00000487194 FBLN1P23142 703 aa8.09□□□□□ -1.11
VAMP3-203ENST00000487194 AMPHP49418 695 aa8.09□□□□□ -1.11
VAMP3-203ENST00000487194 PLEKHF1Q96S99 279 aa8.09□□□□□ -1.11
VAMP3-203ENST00000487194 RTL1A6NKG5 1358 aa8.09□□□□□ -1.12
VAMP3-203ENST00000487194 MAP3K19Q56UN5 1328 aa8.08□□□□□ -1.12
VAMP3-203ENST00000487194 SENP3-EIF4A1A0A087X0R7 540 aa8.08□□□□□ -1.12
VAMP3-203ENST00000487194 E9PSI1 815 aa8.08□□□□□ -1.12
VAMP3-203ENST00000487194 WDR63Q8IWG1 891 aa8.08□□□□□ -1.12
VAMP3-203ENST00000487194 WWC1Q8IX03 1113 aa8.08□□□□□ -1.12
VAMP3-203ENST00000487194 SUPT16HQ9Y5B9 1047 aaKnown RBP8.08□□□□□ -1.12
VAMP3-203ENST00000487194 XIRP1Q702N8 1843 aaKnown RBP8.08□□□□□ -1.12
VAMP3-203ENST00000487194 SOX12O15370 315 aa8.07□□□□□ -1.12
VAMP3-203ENST00000487194 EIF4A2Q14240 407 aaKnown RBP8.07□□□□□ -1.12
VAMP3-203ENST00000487194 NUTM2GQ5VZR2 741 aa8.07□□□□□ -1.12
VAMP3-203ENST00000487194 PHF23Q9BUL5 403 aaPredicted RBP8.07□□□□□ -1.12
VAMP3-203ENST00000487194 RSPH6AQ9H0K4 717 aa8.07□□□□□ -1.12
VAMP3-203ENST00000487194 SLAIN2Q9P270 581 aa8.07□□□□□ -1.12
VAMP3-203ENST00000487194 TRPM3Q9HCF6 1732 aaPredicted RBP8.06□□□□□ -1.12
VAMP3-203ENST00000487194 MARF1Q9Y4F3 1742 aaKnown RBP8.06□□□□□ -1.12
VAMP3-203ENST00000487194 HOXC9P31274 260 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms