RNA–Protein interactions for RNA: ENST00000487121.1

MCFD2-216, Transcript of multiple coagulation factor deficiency 2, humanhuman

TSL 3

Gene MCFD2, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCFD2-216ENST00000487121 NUTM2GQ5VZR2 741 aa21.18■□□□□ 0.98
MCFD2-216ENST00000487121 POLR3AO14802 1390 aaPredicted RBP21.18■□□□□ 0.98
MCFD2-216ENST00000487121 TOPAZ1Q8N9V7 1692 aa21.15■□□□□ 0.98
MCFD2-216ENST00000487121 ST20-MTHFSA0A0A6YYL1 179 aa21.15■□□□□ 0.98
MCFD2-216ENST00000487121 PUS7Q96PZ0 661 aaKnown RBP21.15■□□□□ 0.98
MCFD2-216ENST00000487121 ATAD2Q6PL18 1390 aa21.13■□□□□ 0.97
MCFD2-216ENST00000487121 FAM83GA6ND36 823 aa21.13■□□□□ 0.97
MCFD2-216ENST00000487121 TRPM3Q9HCF6 1732 aaPredicted RBP21.12■□□□□ 0.97
MCFD2-216ENST00000487121 ABTB2Q8N961 1025 aa21.12■□□□□ 0.97
MCFD2-216ENST00000487121 TRPC5Q9UL62 973 aaPredicted RBP21.12■□□□□ 0.97
MCFD2-216ENST00000487121 RBM6P78332 1123 aaKnown RBP21.11■□□□□ 0.97
MCFD2-216ENST00000487121 TESK2Q96S53 571 aa21.11■□□□□ 0.97
MCFD2-216ENST00000487121 BCL9LQ86UU0 1499 aa21.11■□□□□ 0.97
MCFD2-216ENST00000487121 EIF4G2P78344 907 aaKnown RBP eCLIP21.1■□□□□ 0.97
MCFD2-216ENST00000487121 TMF1P82094 1093 aa21.08■□□□□ 0.97
MCFD2-216ENST00000487121 CDCA8Q53HL2 280 aa21.08■□□□□ 0.97
MCFD2-216ENST00000487121 UNC5CLQ8IV45 518 aa21.08■□□□□ 0.97
MCFD2-216ENST00000487121 TMC1Q8TDI8 760 aa21.08■□□□□ 0.97
MCFD2-216ENST00000487121 ALS2Q96Q42 1657 aa21.07■□□□□ 0.96
MCFD2-216ENST00000487121 ZC3H6P61129 1189 aaKnown RBP21.06■□□□□ 0.96
MCFD2-216ENST00000487121 SLC12A5Q9H2X9 1139 aa21.06■□□□□ 0.96
MCFD2-216ENST00000487121 BRD4O60885 1362 aaPredicted RBP21.06■□□□□ 0.96
MCFD2-216ENST00000487121 ATRNO75882 1429 aa21.05■□□□□ 0.96
MCFD2-216ENST00000487121 USP6P35125 1406 aa21.05■□□□□ 0.96
MCFD2-216ENST00000487121 ZNF692Q9BU19 519 aaPredicted RBP21.05■□□□□ 0.96
MCFD2-216ENST00000487121 NINLQ9Y2I6 1382 aa21.05■□□□□ 0.96
MCFD2-216ENST00000487121 SLIT2O94813 1529 aa21.04■□□□□ 0.96
MCFD2-216ENST00000487121 NLRP13Q86W25 1043 aa21.04■□□□□ 0.96
MCFD2-216ENST00000487121 GJD4Q96KN9 370 aaPredicted RBP21.04■□□□□ 0.96
MCFD2-216ENST00000487121 NLRP6P59044 892 aa21.03■□□□□ 0.96
MCFD2-216ENST00000487121 CHRNA2Q15822 529 aa21.03■□□□□ 0.96
MCFD2-216ENST00000487121 PRDM11Q9NQV5 511 aa21.03■□□□□ 0.96
MCFD2-216ENST00000487121 BTG4Q9NY30 223 aa21.03■□□□□ 0.96
MCFD2-216ENST00000487121 CCDC9Q9Y3X0 531 aaKnown RBP21.02■□□□□ 0.96
MCFD2-216ENST00000487121 TTC21BQ7Z4L5 1316 aa21.02■□□□□ 0.95
MCFD2-216ENST00000487121 KIAA0232Q92628 1395 aa21.01■□□□□ 0.95
MCFD2-216ENST00000487121 SSH2Q76I76 1423 aa21.01■□□□□ 0.95
MCFD2-216ENST00000487121 KTN1Q86UP2 1357 aaKnown RBP21■□□□□ 0.95
MCFD2-216ENST00000487121 GCP02774 474 aa21■□□□□ 0.95
MCFD2-216ENST00000487121 RGS12O14924 1447 aa21■□□□□ 0.95
MCFD2-216ENST00000487121 CPSF1Q10570 1443 aaKnown RBP21■□□□□ 0.95
MCFD2-216ENST00000487121 MARF1Q9Y4F3 1742 aaKnown RBP21■□□□□ 0.95
MCFD2-216ENST00000487121 AKAP12Q02952 1782 aa21■□□□□ 0.95
MCFD2-216ENST00000487121 ZEB1P37275 1124 aaPredicted RBP20.99■□□□□ 0.95
MCFD2-216ENST00000487121 VPS72Q15906 364 aa20.99■□□□□ 0.95
MCFD2-216ENST00000487121 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.99■□□□□ 0.953e-7■■■□□ 17.3
MCFD2-216ENST00000487121 USP19O94966 1318 aa20.99■□□□□ 0.95
MCFD2-216ENST00000487121 ABCA3Q99758 1704 aa20.98■□□□□ 0.95
MCFD2-216ENST00000487121 HSPA5P11021 654 aaKnown RBP20.98■□□□□ 0.95
MCFD2-216ENST00000487121 CDK12Q9NYV4 1490 aaPredicted RBP20.98■□□□□ 0.95
MCFD2-216ENST00000487121 ZBTB7CA1YPR0 619 aa20.97■□□□□ 0.95
MCFD2-216ENST00000487121 HDGFL2Q7Z4V5 671 aaPredicted RBP20.97■□□□□ 0.95
MCFD2-216ENST00000487121 ZRANB1Q9UGI0 708 aa20.97■□□□□ 0.95
MCFD2-216ENST00000487121 STRN4Q9NRL3 753 aa20.95■□□□□ 0.94
MCFD2-216ENST00000487121 TERF2IPQ9NYB0 399 aa20.95■□□□□ 0.94
MCFD2-216ENST00000487121 CD163L1Q9NR16 1453 aa20.94■□□□□ 0.94
MCFD2-216ENST00000487121 SOX12O15370 315 aa20.94■□□□□ 0.94
MCFD2-216ENST00000487121 MON2Q7Z3U7 1717 aa20.94■□□□□ 0.94
MCFD2-216ENST00000487121 TTC21AQ8NDW8 1320 aa20.94■□□□□ 0.94
MCFD2-216ENST00000487121 NME9Q86XW9 330 aa20.93■□□□□ 0.94
MCFD2-216ENST00000487121 CRYBG1Q9Y4K1 1723 aa20.92■□□□□ 0.94
MCFD2-216ENST00000487121 UPF1Q92900 1129 aaKnown RBP eCLIP20.92■□□□□ 0.94
MCFD2-216ENST00000487121 A0A1W2PP64 1363 aa20.91■□□□□ 0.94
MCFD2-216ENST00000487121 EVA1CP58658 441 aa20.91■□□□□ 0.94
MCFD2-216ENST00000487121 SEPT12Q8IYM1 358 aa20.91■□□□□ 0.94
MCFD2-216ENST00000487121 PLCH1Q4KWH8 1693 aa20.9■□□□□ 0.94
MCFD2-216ENST00000487121 PHRF1Q9P1Y6 1649 aaKnown RBP20.9■□□□□ 0.94
MCFD2-216ENST00000487121 CPDO75976 1380 aa20.9■□□□□ 0.94
MCFD2-216ENST00000487121 COL14A1Q05707 1796 aaKnown RBP20.9■□□□□ 0.94
MCFD2-216ENST00000487121 GLI3P10071 1580 aa20.89■□□□□ 0.94
MCFD2-216ENST00000487121 NRKQ7Z2Y5 1582 aa20.89■□□□□ 0.94
MCFD2-216ENST00000487121 FAM98CQ17RN3 349 aaKnown RBP20.89■□□□□ 0.93
MCFD2-216ENST00000487121 ANKRD36BQ8N2N9 1353 aa20.88■□□□□ 0.93
MCFD2-216ENST00000487121 SPATA31A5Q5VU36 1347 aa20.88■□□□□ 0.93
MCFD2-216ENST00000487121 SPATA31A7Q8IWB4 1347 aa20.88■□□□□ 0.93
MCFD2-216ENST00000487121 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.88■□□□□ 0.93
MCFD2-216ENST00000487121 EDC4Q6P2E9 1401 aaKnown RBP20.87■□□□□ 0.93
MCFD2-216ENST00000487121 PIK3C2AO00443 1686 aa20.87■□□□□ 0.93
MCFD2-216ENST00000487121 A0A0G2JS52 829 aa20.87■□□□□ 0.93
MCFD2-216ENST00000487121 ONECUT3O60422 494 aaPredicted RBP20.87■□□□□ 0.93
MCFD2-216ENST00000487121 MYT1Q01538 1121 aa20.87■□□□□ 0.93
MCFD2-216ENST00000487121 KCNH5Q8NCM2 988 aa20.87■□□□□ 0.93
MCFD2-216ENST00000487121 USP35Q9P2H5 1018 aa20.87■□□□□ 0.93
MCFD2-216ENST00000487121 NWD2Q9ULI1 1742 aa20.87■□□□□ 0.93
MCFD2-216ENST00000487121 MYOM1P52179 1685 aa20.86■□□□□ 0.93
MCFD2-216ENST00000487121 LARP1Q6PKG0 1096 aaKnown RBP20.86■□□□□ 0.93
MCFD2-216ENST00000487121 POLR3GLQ9BT43 218 aa20.86■□□□□ 0.93
MCFD2-216ENST00000487121 SLIT3O75094 1523 aa20.85■□□□□ 0.93
MCFD2-216ENST00000487121 ARHGEF25Q86VW2 580 aa20.85■□□□□ 0.93
MCFD2-216ENST00000487121 AXIN2Q9Y2T1 843 aa20.85■□□□□ 0.93
MCFD2-216ENST00000487121 CAMTA1Q9Y6Y1 1673 aa20.85■□□□□ 0.93
MCFD2-216ENST00000487121 USP31Q70CQ4 1352 aa20.84■□□□□ 0.93
MCFD2-216ENST00000487121 SPATA31A1Q5TZJ5 1347 aa20.83■□□□□ 0.93
MCFD2-216ENST00000487121 NRAPQ86VF7 1730 aa20.83■□□□□ 0.92
MCFD2-216ENST00000487121 AATKQ6ZMQ8 1374 aa20.83■□□□□ 0.92
MCFD2-216ENST00000487121 USP54Q70EL1 1684 aa20.82■□□□□ 0.92
MCFD2-216ENST00000487121 KRT27Q7Z3Y8 459 aa20.8■□□□□ 0.92
MCFD2-216ENST00000487121 CARD14Q9BXL6 1004 aa20.79■□□□□ 0.92
MCFD2-216ENST00000487121 FBLN1P23142 703 aa20.78■□□□□ 0.92
MCFD2-216ENST00000487121 GGNBP2Q9H3C7 697 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms