RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 RXRBP28702 533 aa11.62□□□□□ -0.55
NUDCD3-209ENST00000487118 ITSN1Q15811 1721 aa11.62□□□□□ -0.55
NUDCD3-209ENST00000487118 EDC4Q6P2E9 1401 aaKnown RBP11.61□□□□□ -0.55
NUDCD3-209ENST00000487118 ADGRL3Q9HAR2 1447 aa11.61□□□□□ -0.55
NUDCD3-209ENST00000487118 PLEKHG3A1L390 1219 aa11.61□□□□□ -0.55
NUDCD3-209ENST00000487118 INSRP06213 1382 aa11.61□□□□□ -0.55
NUDCD3-209ENST00000487118 KIF20BQ96Q89 1820 aa11.6□□□□□ -0.55
NUDCD3-209ENST00000487118 YY1P25490 414 aa11.6□□□□□ -0.55
NUDCD3-209ENST00000487118 FAM9BQ8IZU0 186 aa11.6□□□□□ -0.55
NUDCD3-209ENST00000487118 PHLPP1O60346 1717 aa11.6□□□□□ -0.55
NUDCD3-209ENST00000487118 NRKQ7Z2Y5 1582 aa11.59□□□□□ -0.55
NUDCD3-209ENST00000487118 ZNF772Q68DY9 489 aaPredicted RBP11.59□□□□□ -0.55
NUDCD3-209ENST00000487118 MORC1Q86VD1 984 aa11.59□□□□□ -0.55
NUDCD3-209ENST00000487118 FYB1O15117 783 aa11.58□□□□□ -0.56
NUDCD3-209ENST00000487118 ZNF692Q9BU19 519 aaPredicted RBP11.58□□□□□ -0.56
NUDCD3-209ENST00000487118 POLR3AO14802 1390 aaPredicted RBP11.57□□□□□ -0.56
NUDCD3-209ENST00000487118 TMEM94Q12767 1356 aa11.57□□□□□ -0.56
NUDCD3-209ENST00000487118 SENP3-EIF4A1A0A087X0R7 540 aa11.57□□□□□ -0.56
NUDCD3-209ENST00000487118 PROSER2Q86WR7 435 aaPredicted RBP11.57□□□□□ -0.56
NUDCD3-209ENST00000487118 SSH2Q76I76 1423 aa11.57□□□□□ -0.56
NUDCD3-209ENST00000487118 NCOA3Q9Y6Q9 1424 aa11.57□□□□□ -0.56
NUDCD3-209ENST00000487118 USP6P35125 1406 aa11.56□□□□□ -0.56
NUDCD3-209ENST00000487118 HNRNPUQ00839 825 aaKnown RBP eCLIP11.56□□□□□ -0.56
NUDCD3-209ENST00000487118 ACEP12821 1306 aa11.56□□□□□ -0.56
NUDCD3-209ENST00000487118 BLMP54132 1417 aaPredicted RBP11.55□□□□□ -0.56
NUDCD3-209ENST00000487118 RGPD8O14715 1765 aaPredicted RBP11.55□□□□□ -0.56
NUDCD3-209ENST00000487118 GGNBP2Q9H3C7 697 aa11.55□□□□□ -0.56
NUDCD3-209ENST00000487118 ZBED9Q6R2W3 1325 aa11.54□□□□□ -0.56
NUDCD3-209ENST00000487118 NUTM2FA1L443 756 aa11.53□□□□□ -0.56
NUDCD3-209ENST00000487118 TTC21BQ7Z4L5 1316 aa11.53□□□□□ -0.56
NUDCD3-209ENST00000487118 SHPRHQ149N8 1683 aa11.52□□□□□ -0.56
NUDCD3-209ENST00000487118 DCCP43146 1447 aa11.52□□□□□ -0.56
NUDCD3-209ENST00000487118 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.52□□□□□ -0.57
NUDCD3-209ENST00000487118 TTC21AQ8NDW8 1320 aa11.52□□□□□ -0.57
NUDCD3-209ENST00000487118 OVOS2A0A0J9YW53 1432 aa11.52□□□□□ -0.57
NUDCD3-209ENST00000487118 OVOS2Q6IE36 1432 aa11.52□□□□□ -0.57
NUDCD3-209ENST00000487118 SMG6Q86US8 1419 aaKnown RBP11.52□□□□□ -0.57
NUDCD3-209ENST00000487118 COL3A1P02461 1466 aaPredicted RBP11.51□□□□□ -0.57
NUDCD3-209ENST00000487118 NME9Q86XW9 330 aa11.51□□□□□ -0.57
NUDCD3-209ENST00000487118 USP54Q70EL1 1684 aa11.51□□□□□ -0.57
NUDCD3-209ENST00000487118 AATKQ6ZMQ8 1374 aa11.51□□□□□ -0.57
NUDCD3-209ENST00000487118 LRP6O75581 1613 aa11.5□□□□□ -0.57
NUDCD3-209ENST00000487118 TNNT2P45379 298 aaPredicted RBP11.5□□□□□ -0.57
NUDCD3-209ENST00000487118 MTHFSP49914 203 aa11.5□□□□□ -0.57
NUDCD3-209ENST00000487118 WDR43Q15061 677 aaKnown RBP eCLIP11.5□□□□□ -0.57
NUDCD3-209ENST00000487118 PMFBP1Q8TBY8 1022 aa11.5□□□□□ -0.57
NUDCD3-209ENST00000487118 C19orf44Q9H6X5 657 aa11.5□□□□□ -0.57
NUDCD3-209ENST00000487118 SLAIN2Q9P270 581 aa11.5□□□□□ -0.57
NUDCD3-209ENST00000487118 USP31Q70CQ4 1352 aa11.5□□□□□ -0.57
NUDCD3-209ENST00000487118 COL16A1Q07092 1604 aaPredicted RBP11.49□□□□□ -0.57
NUDCD3-209ENST00000487118 C14orf37Q86TY3 774 aa11.49□□□□□ -0.57
NUDCD3-209ENST00000487118 NGDNQ8NEJ9 315 aaKnown RBP11.49□□□□□ -0.57
NUDCD3-209ENST00000487118 CFAP53Q96M91 514 aa11.49□□□□□ -0.57
NUDCD3-209ENST00000487118 ADAMTS8Q9UP79 889 aa11.49□□□□□ -0.57
NUDCD3-209ENST00000487118 PHF8Q9UPP1 1060 aa11.49□□□□□ -0.57
NUDCD3-209ENST00000487118 PNPLA6Q8IY17 1366 aa11.49□□□□□ -0.57
NUDCD3-209ENST00000487118 COG3Q96JB2 828 aa11.48□□□□□ -0.57
NUDCD3-209ENST00000487118 C1orf167Q5SNV9 1468 aa11.48□□□□□ -0.57
NUDCD3-209ENST00000487118 PIK3C2AO00443 1686 aa11.48□□□□□ -0.57
NUDCD3-209ENST00000487118 KIF1AQ12756 1690 aa11.48□□□□□ -0.57
NUDCD3-209ENST00000487118 MST1RQ04912 1400 aa11.47□□□□□ -0.57
NUDCD3-209ENST00000487118 CDK12Q9NYV4 1490 aaPredicted RBP11.46□□□□□ -0.57
NUDCD3-209ENST00000487118 JCADQ9P266 1359 aa11.46□□□□□ -0.57
NUDCD3-209ENST00000487118 POLKQ9UBT6 870 aa11.46□□□□□ -0.57
NUDCD3-209ENST00000487118 MSH6P52701 1360 aa11.45□□□□□ -0.58
NUDCD3-209ENST00000487118 MARF1Q9Y4F3 1742 aaKnown RBP11.45□□□□□ -0.58
NUDCD3-209ENST00000487118 ATF3P18847 181 aa11.44□□□□□ -0.58
NUDCD3-209ENST00000487118 ESCO1Q5FWF5 840 aa11.44□□□□□ -0.58
NUDCD3-209ENST00000487118 CADPS2Q86UW7 1296 aa11.44□□□□□ -0.58
NUDCD3-209ENST00000487118 MAP2P11137 1827 aaKnown RBP11.44□□□□□ -0.58
NUDCD3-209ENST00000487118 RGS12O14924 1447 aa11.43□□□□□ -0.58
NUDCD3-209ENST00000487118 TRPM3Q9HCF6 1732 aaPredicted RBP11.43□□□□□ -0.58
NUDCD3-209ENST00000487118 ORAI2Q96SN7 254 aa11.43□□□□□ -0.58
NUDCD3-209ENST00000487118 NGEFQ8N5V2 710 aa11.42□□□□□ -0.58
NUDCD3-209ENST00000487118 NUDCQ9Y266 331 aa11.42□□□□□ -0.58
NUDCD3-209ENST00000487118 DIAPH1O60610 1272 aaKnown RBP11.41□□□□□ -0.58
NUDCD3-209ENST00000487118 FBLN1P23142 703 aa11.41□□□□□ -0.58
NUDCD3-209ENST00000487118 PDE3BQ13370 1112 aa11.41□□□□□ -0.58
NUDCD3-209ENST00000487118 EMILIN1Q9Y6C2 1016 aa11.41□□□□□ -0.58
NUDCD3-209ENST00000487118 PEAK1Q9H792 1746 aa11.4□□□□□ -0.58
NUDCD3-209ENST00000487118 PSME1Q06323 249 aa11.4□□□□□ -0.58
NUDCD3-209ENST00000487118 NCBP3Q53F19 620 aaKnown RBP11.4□□□□□ -0.58
NUDCD3-209ENST00000487118 KIF24Q5T7B8 1368 aa11.4□□□□□ -0.59
NUDCD3-209ENST00000487118 AFF2P51816 1311 aa11.39□□□□□ -0.59
NUDCD3-209ENST00000487118 ZNF521Q96K83 1311 aa11.39□□□□□ -0.59
NUDCD3-209ENST00000487118 PSDA5PKW4 1024 aaPredicted RBP11.39□□□□□ -0.59
NUDCD3-209ENST00000487118 IL13P35225 146 aa11.39□□□□□ -0.59
NUDCD3-209ENST00000487118 NLRP6P59044 892 aa11.39□□□□□ -0.59
NUDCD3-209ENST00000487118 RRS1Q15050 365 aaKnown RBP11.39□□□□□ -0.59
NUDCD3-209ENST00000487118 CCDC146Q8IYE0 955 aa11.39□□□□□ -0.59
NUDCD3-209ENST00000487118 DDX17Q92841 729 aaKnown RBP11.39□□□□□ -0.59
NUDCD3-209ENST00000487118 RUNDC1Q96C34 613 aa11.39□□□□□ -0.59
NUDCD3-209ENST00000487118 QTRT2Q9H974 415 aaKnown RBP11.39□□□□□ -0.59
NUDCD3-209ENST00000487118 ALS2Q96Q42 1657 aa11.39□□□□□ -0.59
NUDCD3-209ENST00000487118 SLIT3O75094 1523 aa11.39□□□□□ -0.59
NUDCD3-209ENST00000487118 FOXO3O43524 673 aa11.38□□□□□ -0.59
NUDCD3-209ENST00000487118 U2AF1L5P0DN76 240 aaPredicted RBP11.38□□□□□ -0.59
NUDCD3-209ENST00000487118 U2AF1Q01081 240 aaKnown RBP eCLIP11.38□□□□□ -0.59
NUDCD3-209ENST00000487118 KRT28Q7Z3Y7 464 aa11.38□□□□□ -0.59
NUDCD3-209ENST00000487118 ABTB2Q8N961 1025 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms