RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 CABP1Q9NZU7 370 aa31.7■■■□□ 2.67
CDHR3-212ENST00000487084 ABCA3Q99758 1704 aa31.67■■■□□ 2.66
CDHR3-212ENST00000487084 SBNO2Q9Y2G9 1366 aa31.67■■■□□ 2.66
CDHR3-212ENST00000487084 TRPC5Q9UL62 973 aaPredicted RBP31.66■■■□□ 2.66
CDHR3-212ENST00000487084 NUTM2GQ5VZR2 741 aa31.65■■■□□ 2.66
CDHR3-212ENST00000487084 TIMELESSQ9UNS1 1208 aa31.65■■■□□ 2.66
CDHR3-212ENST00000487084 RBM6P78332 1123 aaKnown RBP31.64■■■□□ 2.66
CDHR3-212ENST00000487084 ATAD2Q6PL18 1390 aa31.63■■■□□ 2.65
CDHR3-212ENST00000487084 BCL9LQ86UU0 1499 aa31.62■■■□□ 2.65
CDHR3-212ENST00000487084 ATRNO75882 1429 aa31.6■■■□□ 2.65
CDHR3-212ENST00000487084 ABTB2Q8N961 1025 aa31.6■■■□□ 2.65
CDHR3-212ENST00000487084 SLIT2O94813 1529 aa31.59■■■□□ 2.65
CDHR3-212ENST00000487084 ST20-MTHFSA0A0A6YYL1 179 aa31.59■■■□□ 2.65
CDHR3-212ENST00000487084 UNC5CLQ8IV45 518 aa31.58■■■□□ 2.65
CDHR3-212ENST00000487084 CDK12Q9NYV4 1490 aaPredicted RBP31.58■■■□□ 2.65
CDHR3-212ENST00000487084 USP6P35125 1406 aa31.58■■■□□ 2.65
CDHR3-212ENST00000487084 FAM83GA6ND36 823 aa31.56■■■□□ 2.64
CDHR3-212ENST00000487084 USP47Q96K76 1375 aa31.56■■■□□ 2.64
CDHR3-212ENST00000487084 RGS12O14924 1447 aa31.55■■■□□ 2.64
CDHR3-212ENST00000487084 CRYBG1Q9Y4K1 1723 aa31.54■■■□□ 2.64
CDHR3-212ENST00000487084 BRD4O60885 1362 aaPredicted RBP31.54■■■□□ 2.64
CDHR3-212ENST00000487084 PLCH1Q4KWH8 1693 aa31.53■■■□□ 2.64
CDHR3-212ENST00000487084 TMC1Q8TDI8 760 aa31.52■■■□□ 2.64
CDHR3-212ENST00000487084 TESK2Q96S53 571 aa31.52■■■□□ 2.64
CDHR3-212ENST00000487084 PRDM11Q9NQV5 511 aa31.52■■■□□ 2.64
CDHR3-212ENST00000487084 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.51■■■□□ 2.63
CDHR3-212ENST00000487084 PHRF1Q9P1Y6 1649 aaKnown RBP31.5■■■□□ 2.63
CDHR3-212ENST00000487084 NLRP13Q86W25 1043 aa31.5■■■□□ 2.63
CDHR3-212ENST00000487084 GJD4Q96KN9 370 aaPredicted RBP31.5■■■□□ 2.63
CDHR3-212ENST00000487084 ZNF692Q9BU19 519 aaPredicted RBP31.5■■■□□ 2.63
CDHR3-212ENST00000487084 ZC3H6P61129 1189 aaKnown RBP31.49■■■□□ 2.63
CDHR3-212ENST00000487084 CCDC9Q9Y3X0 531 aaKnown RBP31.49■■■□□ 2.63
CDHR3-212ENST00000487084 KIAA0232Q92628 1395 aa31.48■■■□□ 2.63
CDHR3-212ENST00000487084 BTG4Q9NY30 223 aa31.48■■■□□ 2.63
CDHR3-212ENST00000487084 KTN1Q86UP2 1357 aaKnown RBP31.47■■■□□ 2.63
CDHR3-212ENST00000487084 NWD2Q9ULI1 1742 aa31.46■■■□□ 2.63
CDHR3-212ENST00000487084 COL14A1Q05707 1796 aaKnown RBP31.46■■■□□ 2.63
CDHR3-212ENST00000487084 NLRP6P59044 892 aa31.46■■■□□ 2.63
CDHR3-212ENST00000487084 USP19O94966 1318 aa31.46■■■□□ 2.63
CDHR3-212ENST00000487084 CPSF1Q10570 1443 aaKnown RBP31.45■■■□□ 2.63
CDHR3-212ENST00000487084 CHRNA2Q15822 529 aa31.45■■■□□ 2.63
CDHR3-212ENST00000487084 SSH2Q76I76 1423 aa31.45■■■□□ 2.63
CDHR3-212ENST00000487084 AKAP12Q02952 1782 aa31.44■■■□□ 2.62
CDHR3-212ENST00000487084 SLC24A1O60721 1099 aa31.44■■■□□ 2.62
CDHR3-212ENST00000487084 VPS72Q15906 364 aa31.44■■■□□ 2.62
CDHR3-212ENST00000487084 SLC12A5Q9H2X9 1139 aa31.44■■■□□ 2.62
CDHR3-212ENST00000487084 TTC21BQ7Z4L5 1316 aa31.44■■■□□ 2.62
CDHR3-212ENST00000487084 NRKQ7Z2Y5 1582 aa31.43■■■□□ 2.62
CDHR3-212ENST00000487084 HDGFL2Q7Z4V5 671 aaPredicted RBP31.42■■■□□ 2.62
CDHR3-212ENST00000487084 PUS7Q96PZ0 661 aaKnown RBP31.42■■■□□ 2.62
CDHR3-212ENST00000487084 GLI3P10071 1580 aa31.4■■■□□ 2.62
CDHR3-212ENST00000487084 GCP02774 474 aa31.4■■■□□ 2.62
CDHR3-212ENST00000487084 TMF1P82094 1093 aa31.4■■■□□ 2.62
CDHR3-212ENST00000487084 PIK3C2AO00443 1686 aa31.39■■■□□ 2.62
CDHR3-212ENST00000487084 TTC21AQ8NDW8 1320 aa31.39■■■□□ 2.62
CDHR3-212ENST00000487084 NRAPQ86VF7 1730 aa31.38■■■□□ 2.61
CDHR3-212ENST00000487084 ZBTB7CA1YPR0 619 aa31.38■■■□□ 2.61
CDHR3-212ENST00000487084 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.38■■■□□ 2.613e-7■■■■□ 24.1
CDHR3-212ENST00000487084 CD163L1Q9NR16 1453 aa31.38■■■□□ 2.61
CDHR3-212ENST00000487084 TERF2IPQ9NYB0 399 aa31.37■■■□□ 2.61
CDHR3-212ENST00000487084 MON2Q7Z3U7 1717 aa31.36■■■□□ 2.61
CDHR3-212ENST00000487084 STRN4Q9NRL3 753 aa31.35■■■□□ 2.61
CDHR3-212ENST00000487084 A0A1W2PP64 1363 aa31.34■■■□□ 2.61
CDHR3-212ENST00000487084 CPDO75976 1380 aa31.34■■■□□ 2.61
CDHR3-212ENST00000487084 NINLQ9Y2I6 1382 aa31.34■■■□□ 2.61
CDHR3-212ENST00000487084 SLIT3O75094 1523 aa31.33■■■□□ 2.61
CDHR3-212ENST00000487084 SOX12O15370 315 aa31.32■■■□□ 2.6
CDHR3-212ENST00000487084 A0A0G2JS52 829 aa31.31■■■□□ 2.6
CDHR3-212ENST00000487084 MYT1Q01538 1121 aa31.31■■■□□ 2.6
CDHR3-212ENST00000487084 UPF1Q92900 1129 aaKnown RBP eCLIP31.31■■■□□ 2.6
CDHR3-212ENST00000487084 EVA1CP58658 441 aa31.29■■■□□ 2.6
CDHR3-212ENST00000487084 CDCA8Q53HL2 280 aa31.29■■■□□ 2.6
CDHR3-212ENST00000487084 NME9Q86XW9 330 aa31.29■■■□□ 2.6
CDHR3-212ENST00000487084 SEPT12Q8IYM1 358 aa31.29■■■□□ 2.6
CDHR3-212ENST00000487084 EDC4Q6P2E9 1401 aaKnown RBP31.29■■■□□ 2.6
CDHR3-212ENST00000487084 FAM98CQ17RN3 349 aaKnown RBP31.28■■■□□ 2.6
CDHR3-212ENST00000487084 ZRANB1Q9UGI0 708 aa31.28■■■□□ 2.6
CDHR3-212ENST00000487084 SPATA31A5Q5VU36 1347 aa31.27■■■□□ 2.6
CDHR3-212ENST00000487084 SPATA31A7Q8IWB4 1347 aa31.27■■■□□ 2.6
CDHR3-212ENST00000487084 KCNH5Q8NCM2 988 aa31.27■■■□□ 2.6
CDHR3-212ENST00000487084 CAMTA1Q9Y6Y1 1673 aa31.25■■■□□ 2.59
CDHR3-212ENST00000487084 EIF4G2P78344 907 aaKnown RBP eCLIP31.24■■■□□ 2.59
CDHR3-212ENST00000487084 LMO7Q8WWI1 1683 aa31.24■■■□□ 2.59
CDHR3-212ENST00000487084 USP31Q70CQ4 1352 aa31.22■■■□□ 2.59
CDHR3-212ENST00000487084 ANKRD36BQ8N2N9 1353 aa31.22■■■□□ 2.59
CDHR3-212ENST00000487084 USP35Q9P2H5 1018 aa31.22■■■□□ 2.59
CDHR3-212ENST00000487084 ONECUT3O60422 494 aaPredicted RBP31.21■■■□□ 2.59
CDHR3-212ENST00000487084 SPATA31A1Q5TZJ5 1347 aa31.21■■■□□ 2.59
CDHR3-212ENST00000487084 AATKQ6ZMQ8 1374 aa31.2■■■□□ 2.59
CDHR3-212ENST00000487084 HSPA5P11021 654 aaKnown RBP31.2■■■□□ 2.59
CDHR3-212ENST00000487084 LARP1Q6PKG0 1096 aaKnown RBP31.2■■■□□ 2.59
CDHR3-212ENST00000487084 ARHGEF25Q86VW2 580 aa31.18■■■□□ 2.58
CDHR3-212ENST00000487084 POLR3GLQ9BT43 218 aa31.18■■■□□ 2.58
CDHR3-212ENST00000487084 COL5A2P05997 1499 aaPredicted RBP31.18■■■□□ 2.58
CDHR3-212ENST00000487084 NFAT5O94916 1531 aa31.18■■■□□ 2.58
CDHR3-212ENST00000487084 KRT27Q7Z3Y8 459 aa31.16■■■□□ 2.58
CDHR3-212ENST00000487084 BRWD3Q6RI45 1802 aa31.15■■■□□ 2.58
CDHR3-212ENST00000487084 USP54Q70EL1 1684 aa31.14■■■□□ 2.58
CDHR3-212ENST00000487084 AXIN2Q9Y2T1 843 aa31.13■■■□□ 2.57
CDHR3-212ENST00000487084 OVOS2A0A0J9YW53 1432 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms