RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 PPIP5K1Q6PFW1 1433 aa14.45□□□□□ -0.1
NEK4-204ENST00000487068 CABP2Q9NPB3 220 aa14.44□□□□□ -0.1
NEK4-204ENST00000487068 USP21Q9UK80 565 aa14.44□□□□□ -0.1
NEK4-204ENST00000487068 TRPC5Q9UL62 973 aaPredicted RBP14.44□□□□□ -0.1
NEK4-204ENST00000487068 PLCH1Q4KWH8 1693 aa14.44□□□□□ -0.1
NEK4-204ENST00000487068 PAK3O75914 559 aaPredicted RBP14.43□□□□□ -0.1
NEK4-204ENST00000487068 PHRF1Q9P1Y6 1649 aaKnown RBP14.43□□□□□ -0.1
NEK4-204ENST00000487068 CRYBG1Q9Y4K1 1723 aa14.43□□□□□ -0.1
NEK4-204ENST00000487068 SPATA31A3Q5VYP0 1347 aa14.42□□□□□ -0.1
NEK4-204ENST00000487068 MON2Q7Z3U7 1717 aa14.42□□□□□ -0.1
NEK4-204ENST00000487068 TIMELESSQ9UNS1 1208 aa14.42□□□□□ -0.1
NEK4-204ENST00000487068 ARHGEF10O15013 1369 aa14.42□□□□□ -0.1
NEK4-204ENST00000487068 CCDC61Q9Y6R9 512 aa14.41□□□□□ -0.1
NEK4-204ENST00000487068 SBNO1A3KN83 1393 aa14.41□□□□□ -0.1
NEK4-204ENST00000487068 ATRNO75882 1429 aa14.41□□□□□ -0.1
NEK4-204ENST00000487068 USP47Q96K76 1375 aa14.4□□□□□ -0.1
NEK4-204ENST00000487068 SBNO2Q9Y2G9 1366 aa14.4□□□□□ -0.1
NEK4-204ENST00000487068 FNBP4Q8N3X1 1017 aaPredicted RBP14.4□□□□□ -0.1
NEK4-204ENST00000487068 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.39□□□□□ -0.11
NEK4-204ENST00000487068 ZRANB1Q9UGI0 708 aa14.39□□□□□ -0.11
NEK4-204ENST00000487068 ACEP12821 1306 aa14.39□□□□□ -0.11
NEK4-204ENST00000487068 NRKQ7Z2Y5 1582 aa14.39□□□□□ -0.11
NEK4-204ENST00000487068 NWD2Q9ULI1 1742 aa14.38□□□□□ -0.11
NEK4-204ENST00000487068 POLR3AO14802 1390 aaPredicted RBP14.37□□□□□ -0.11
NEK4-204ENST00000487068 PIK3C2AO00443 1686 aa14.36□□□□□ -0.11
NEK4-204ENST00000487068 ST20-MTHFSA0A0A6YYL1 179 aa14.36□□□□□ -0.11
NEK4-204ENST00000487068 COL14A1Q05707 1796 aaKnown RBP14.35□□□□□ -0.11
NEK4-204ENST00000487068 CCDC125Q86Z20 511 aa14.35□□□□□ -0.11
NEK4-204ENST00000487068 CABLES1Q8TDN4 633 aa14.35□□□□□ -0.11
NEK4-204ENST00000487068 CNKSR2Q8WXI2 1034 aa14.35□□□□□ -0.11
NEK4-204ENST00000487068 CABP1Q9NZU7 370 aa14.35□□□□□ -0.11
NEK4-204ENST00000487068 USP6P35125 1406 aa14.34□□□□□ -0.11
NEK4-204ENST00000487068 PLEKHG3A1L390 1219 aa14.34□□□□□ -0.11
NEK4-204ENST00000487068 TMC1Q8TDI8 760 aa14.34□□□□□ -0.11
NEK4-204ENST00000487068 MYOM1P52179 1685 aa14.33□□□□□ -0.11
NEK4-204ENST00000487068 BCL9LQ86UU0 1499 aa14.33□□□□□ -0.12
NEK4-204ENST00000487068 NUTM2GQ5VZR2 741 aa14.33□□□□□ -0.12
NEK4-204ENST00000487068 SRCAPQ6ZRS2 3230 aa14.33□□□□□ -0.12
NEK4-204ENST00000487068 NRAPQ86VF7 1730 aa14.32□□□□□ -0.12
NEK4-204ENST00000487068 KIF20BQ96Q89 1820 aa14.32□□□□□ -0.12
NEK4-204ENST00000487068 GJD4Q96KN9 370 aaPredicted RBP14.32□□□□□ -0.12
NEK4-204ENST00000487068 TMF1P82094 1093 aa14.31□□□□□ -0.12
NEK4-204ENST00000487068 ABTB2Q8N961 1025 aa14.31□□□□□ -0.12
NEK4-204ENST00000487068 LTN1O94822 1766 aa14.31□□□□□ -0.12
NEK4-204ENST00000487068 EP400Q96L91 3159 aa14.31□□□□□ -0.12
NEK4-204ENST00000487068 KTN1Q86UP2 1357 aaKnown RBP14.31□□□□□ -0.12
NEK4-204ENST00000487068 SLC24A1O60721 1099 aa14.3□□□□□ -0.12
NEK4-204ENST00000487068 RGPD5Q99666 1765 aa14.29□□□□□ -0.12
NEK4-204ENST00000487068 TESK2Q96S53 571 aa14.29□□□□□ -0.12
NEK4-204ENST00000487068 BRD4O60885 1362 aaPredicted RBP14.29□□□□□ -0.12
NEK4-204ENST00000487068 GLI3P10071 1580 aa14.29□□□□□ -0.12
NEK4-204ENST00000487068 BLMP54132 1417 aaPredicted RBP14.28□□□□□ -0.12
NEK4-204ENST00000487068 HDGFL2Q7Z4V5 671 aaPredicted RBP14.28□□□□□ -0.12
NEK4-204ENST00000487068 USP54Q70EL1 1684 aa14.27□□□□□ -0.12
NEK4-204ENST00000487068 NINLQ9Y2I6 1382 aa14.27□□□□□ -0.12
NEK4-204ENST00000487068 POLR3GLQ9BT43 218 aa14.27□□□□□ -0.13
NEK4-204ENST00000487068 ZNF692Q9BU19 519 aaPredicted RBP14.27□□□□□ -0.13
NEK4-204ENST00000487068 SLIT2O94813 1529 aa14.26□□□□□ -0.13
NEK4-204ENST00000487068 CPSF1Q10570 1443 aaKnown RBP14.26□□□□□ -0.13
NEK4-204ENST00000487068 ZBTB7CA1YPR0 619 aa14.26□□□□□ -0.13
NEK4-204ENST00000487068 EIF4G2P78344 907 aaKnown RBP eCLIP14.26□□□□□ -0.13
NEK4-204ENST00000487068 CDCA8Q53HL2 280 aa14.26□□□□□ -0.13
NEK4-204ENST00000487068 NLRP13Q86W25 1043 aa14.26□□□□□ -0.13
NEK4-204ENST00000487068 UNC5CLQ8IV45 518 aa14.26□□□□□ -0.13
NEK4-204ENST00000487068 PRDM11Q9NQV5 511 aa14.26□□□□□ -0.13
NEK4-204ENST00000487068 TERF2IPQ9NYB0 399 aa14.26□□□□□ -0.13
NEK4-204ENST00000487068 CCDC9Q9Y3X0 531 aaKnown RBP14.26□□□□□ -0.13
NEK4-204ENST00000487068 BRWD3Q6RI45 1802 aa14.26□□□□□ -0.13
NEK4-204ENST00000487068 CD163L1Q9NR16 1453 aa14.25□□□□□ -0.13
NEK4-204ENST00000487068 A0A1W2PP64 1363 aa14.25□□□□□ -0.13
NEK4-204ENST00000487068 NLRP6P59044 892 aa14.25□□□□□ -0.13
NEK4-204ENST00000487068 SLIT3O75094 1523 aa14.25□□□□□ -0.13
NEK4-204ENST00000487068 KIAA0232Q92628 1395 aa14.24□□□□□ -0.13
NEK4-204ENST00000487068 TTC21AQ8NDW8 1320 aa14.24□□□□□ -0.13
NEK4-204ENST00000487068 ZC3H6P61129 1189 aaKnown RBP14.24□□□□□ -0.13
NEK4-204ENST00000487068 SF3B2Q13435 895 aaKnown RBP14.24□□□□□ -0.13
NEK4-204ENST00000487068 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.24□□□□□ -0.13
NEK4-204ENST00000487068 SLC12A5Q9H2X9 1139 aa14.24□□□□□ -0.13
NEK4-204ENST00000487068 EDC4Q6P2E9 1401 aaKnown RBP14.24□□□□□ -0.13
NEK4-204ENST00000487068 TTC21BQ7Z4L5 1316 aa14.23□□□□□ -0.13
NEK4-204ENST00000487068 SOX12O15370 315 aa14.23□□□□□ -0.13
NEK4-204ENST00000487068 LMO7Q8WWI1 1683 aa14.23□□□□□ -0.13
NEK4-204ENST00000487068 USP19O94966 1318 aa14.22□□□□□ -0.13
NEK4-204ENST00000487068 HSPA5P11021 654 aaKnown RBP14.22□□□□□ -0.13
NEK4-204ENST00000487068 DEFB132Q7Z7B7 95 aa14.22□□□□□ -0.13
NEK4-204ENST00000487068 PUS7Q96PZ0 661 aaKnown RBP14.22□□□□□ -0.13
NEK4-204ENST00000487068 SSH2Q76I76 1423 aa14.22□□□□□ -0.13
NEK4-204ENST00000487068 LRP5O75197 1615 aa14.22□□□□□ -0.13
NEK4-204ENST00000487068 WNK3Q9BYP7 1800 aa14.21□□□□□ -0.13
NEK4-204ENST00000487068 FAM83GA6ND36 823 aa14.21□□□□□ -0.13
NEK4-204ENST00000487068 CHRNA2Q15822 529 aa14.21□□□□□ -0.13
NEK4-204ENST00000487068 BTG4Q9NY30 223 aa14.21□□□□□ -0.13
NEK4-204ENST00000487068 ANKRD26Q9UPS8 1709 aa14.21□□□□□ -0.14
NEK4-204ENST00000487068 ANKRD36BQ8N2N9 1353 aa14.21□□□□□ -0.14
NEK4-204ENST00000487068 A0A0G2JS52 829 aa14.2□□□□□ -0.14
NEK4-204ENST00000487068 MYT1Q01538 1121 aa14.2□□□□□ -0.14
NEK4-204ENST00000487068 SEPT12Q8IYM1 358 aa14.2□□□□□ -0.14
NEK4-204ENST00000487068 GCP02774 474 aa14.19□□□□□ -0.14
NEK4-204ENST00000487068 STRN4Q9NRL3 753 aa14.19□□□□□ -0.14
NEK4-204ENST00000487068 NFAT5O94916 1531 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms