RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 KIF1BO60333 1816 aa9.68□□□□□ -0.86
CTDSPL-208ENST00000486978 PTGER2P43116 358 aa9.67□□□□□ -0.86
CTDSPL-208ENST00000486978 COL14A1Q05707 1796 aaKnown RBP9.67□□□□□ -0.86
CTDSPL-208ENST00000486978 KIF1AQ12756 1690 aa9.67□□□□□ -0.86
CTDSPL-208ENST00000486978 CCDC144AA2RUR9 1427 aa9.66□□□□□ -0.86
CTDSPL-208ENST00000486978 CRYBG1Q9Y4K1 1723 aa9.66□□□□□ -0.86
CTDSPL-208ENST00000486978 LMOD2Q6P5Q4 547 aa9.66□□□□□ -0.86
CTDSPL-208ENST00000486978 ANO8Q9HCE9 1232 aaPredicted RBP9.66□□□□□ -0.86
CTDSPL-208ENST00000486978 TRPM3Q9HCF6 1732 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL-208ENST00000486978 NBPF8Q3BBV2 869 aa9.65□□□□□ -0.86
CTDSPL-208ENST00000486978 NBPF14Q5TI25 921 aa9.65□□□□□ -0.86
CTDSPL-208ENST00000486978 FAM196AQ6ZSG2 479 aa9.65□□□□□ -0.86
CTDSPL-208ENST00000486978 PPLO60437 1756 aa9.65□□□□□ -0.87
CTDSPL-208ENST00000486978 IFT172Q9UG01 1749 aa9.65□□□□□ -0.87
CTDSPL-208ENST00000486978 PARD3Q8TEW0 1356 aa9.64□□□□□ -0.87
CTDSPL-208ENST00000486978 ZBTB7AO95365 584 aa9.64□□□□□ -0.87
CTDSPL-208ENST00000486978 SYT17Q9BSW7 474 aa9.64□□□□□ -0.87
CTDSPL-208ENST00000486978 STK26Q9P289 416 aa9.64□□□□□ -0.87
CTDSPL-208ENST00000486978 ATF5Q9Y2D1 282 aaPredicted RBP9.64□□□□□ -0.87
CTDSPL-208ENST00000486978 SHANK3Q9BYB0 1731 aa9.64□□□□□ -0.87
CTDSPL-208ENST00000486978 ALS2Q96Q42 1657 aa9.64□□□□□ -0.87
CTDSPL-208ENST00000486978 SPATA31A1Q5TZJ5 1347 aa9.63□□□□□ -0.87
CTDSPL-208ENST00000486978 PTF1AQ7RTS3 328 aa9.63□□□□□ -0.87
CTDSPL-208ENST00000486978 FHDC1Q9C0D6 1143 aaPredicted RBP9.63□□□□□ -0.87
CTDSPL-208ENST00000486978 SBF2Q86WG5 1849 aa9.63□□□□□ -0.87
CTDSPL-208ENST00000486978 PHF8Q9UPP1 1060 aa9.62□□□□□ -0.87
CTDSPL-208ENST00000486978 SBNO1A3KN83 1393 aa9.62□□□□□ -0.87
CTDSPL-208ENST00000486978 NRXN1Q9ULB1 1477 aa9.61□□□□□ -0.87
CTDSPL-208ENST00000486978 VGFO15240 615 aaPredicted RBP9.61□□□□□ -0.87
CTDSPL-208ENST00000486978 PROM2Q8N271 834 aa9.61□□□□□ -0.87
CTDSPL-208ENST00000486978 PMFBP1Q8TBY8 1022 aa9.61□□□□□ -0.87
CTDSPL-208ENST00000486978 TECPR2O15040 1411 aa9.61□□□□□ -0.87
CTDSPL-208ENST00000486978 GIGYF1O75420 1035 aaPredicted RBP9.6□□□□□ -0.87
CTDSPL-208ENST00000486978 PSME1Q06323 249 aa9.6□□□□□ -0.87
CTDSPL-208ENST00000486978 TMEM132EQ6IEE7 984 aa9.6□□□□□ -0.87
CTDSPL-208ENST00000486978 SGIP1Q9BQI5 828 aa9.6□□□□□ -0.87
CTDSPL-208ENST00000486978 KNDC1Q76NI1 1749 aa9.59□□□□□ -0.87
CTDSPL-208ENST00000486978 ADGRF5Q8IZF2 1346 aa9.59□□□□□ -0.87
CTDSPL-208ENST00000486978 PCNTO95613 3336 aa9.59□□□□□ -0.87
CTDSPL-208ENST00000486978 CHRNA2Q15822 529 aa9.59□□□□□ -0.87
CTDSPL-208ENST00000486978 SLC4A1APQ9BWU0 796 aaKnown RBP9.59□□□□□ -0.87
CTDSPL-208ENST00000486978 ARHGEF10O15013 1369 aa9.59□□□□□ -0.87
CTDSPL-208ENST00000486978 PEAK1Q9H792 1746 aa9.59□□□□□ -0.87
CTDSPL-208ENST00000486978 USP35Q9P2H5 1018 aa9.58□□□□□ -0.88
CTDSPL-208ENST00000486978 STRN4Q9NRL3 753 aa9.57□□□□□ -0.88
CTDSPL-208ENST00000486978 RGPD3A6NKT7 1758 aaPredicted RBP9.57□□□□□ -0.88
CTDSPL-208ENST00000486978 RGPD4Q7Z3J3 1758 aa9.57□□□□□ -0.88
CTDSPL-208ENST00000486978 ACIN1Q9UKV3 1341 aaKnown RBP9.56□□□□□ -0.88
CTDSPL-208ENST00000486978 ABCC11Q96J66 1382 aa9.55□□□□□ -0.88
CTDSPL-208ENST00000486978 PDE3BQ13370 1112 aa9.55□□□□□ -0.88
CTDSPL-208ENST00000486978 DLC1Q96QB1 1528 aa9.55□□□□□ -0.88
CTDSPL-208ENST00000486978 KIAA0232Q92628 1395 aa9.54□□□□□ -0.88
CTDSPL-208ENST00000486978 PHRF1Q9P1Y6 1649 aaKnown RBP9.54□□□□□ -0.88
CTDSPL-208ENST00000486978 LARP1Q6PKG0 1096 aaKnown RBP9.54□□□□□ -0.88
CTDSPL-208ENST00000486978 PRDM11Q9NQV5 511 aa9.54□□□□□ -0.88
CTDSPL-208ENST00000486978 PARP4Q9UKK3 1724 aaKnown RBP9.53□□□□□ -0.88
CTDSPL-208ENST00000486978 PLSCR1O15162 318 aa9.53□□□□□ -0.88
CTDSPL-208ENST00000486978 SAFB2Q14151 953 aaKnown RBP eCLIP9.53□□□□□ -0.88
CTDSPL-208ENST00000486978 BARGINQ6ZT62 677 aa9.53□□□□□ -0.88
CTDSPL-208ENST00000486978 MPHOSPH9Q99550 1183 aa9.53□□□□□ -0.88
CTDSPL-208ENST00000486978 RPGRIP1LQ68CZ1 1315 aa9.53□□□□□ -0.88
CTDSPL-208ENST00000486978 ZC3H6P61129 1189 aaKnown RBP9.52□□□□□ -0.89
CTDSPL-208ENST00000486978 YTHDC2Q9H6S0 1430 aaKnown RBP9.52□□□□□ -0.89
CTDSPL-208ENST00000486978 PRR36Q9H6K5 1346 aa9.52□□□□□ -0.89
CTDSPL-208ENST00000486978 RAB3GAP2Q9H2M9 1393 aa9.51□□□□□ -0.89
CTDSPL-208ENST00000486978 SSH2Q76I76 1423 aa9.51□□□□□ -0.89
CTDSPL-208ENST00000486978 GPR162Q16538 588 aa9.51□□□□□ -0.89
CTDSPL-208ENST00000486978 BCL11BQ9C0K0 894 aaPredicted RBP9.51□□□□□ -0.89
CTDSPL-208ENST00000486978 CAPN15O75808 1086 aa9.5□□□□□ -0.89
CTDSPL-208ENST00000486978 HSPA6P17066 643 aa9.5□□□□□ -0.89
CTDSPL-208ENST00000486978 SLC15A2Q16348 729 aa9.5□□□□□ -0.89
CTDSPL-208ENST00000486978 NUTM2GQ5VZR2 741 aa9.5□□□□□ -0.89
CTDSPL-208ENST00000486978 ARXQ96QS3 562 aa9.5□□□□□ -0.89
CTDSPL-208ENST00000486978 LMO7Q8WWI1 1683 aa9.5□□□□□ -0.89
CTDSPL-208ENST00000486978 MTFR1LQ9H019 292 aa9.49□□□□□ -0.89
CTDSPL-208ENST00000486978 LRRC37A3O60309 1634 aa9.49□□□□□ -0.89
CTDSPL-208ENST00000486978 PAK3O75914 559 aaPredicted RBP9.48□□□□□ -0.89
CTDSPL-208ENST00000486978 YBX3P16989 372 aaKnown RBP eCLIP9.48□□□□□ -0.89
CTDSPL-208ENST00000486978 TXNRD1Q16881 649 aa9.48□□□□□ -0.89
CTDSPL-208ENST00000486978 COL13A1Q5TAT6 717 aaPredicted RBP9.48□□□□□ -0.89
CTDSPL-208ENST00000486978 TCP11L2Q8N4U5 519 aa9.48□□□□□ -0.89
CTDSPL-208ENST00000486978 NLGN2Q8NFZ4 835 aa9.48□□□□□ -0.89
CTDSPL-208ENST00000486978 SIRT1Q96EB6 747 aa9.48□□□□□ -0.89
CTDSPL-208ENST00000486978 RNF39Q9H2S5 420 aa9.48□□□□□ -0.89
CTDSPL-208ENST00000486978 MAP3K5Q99683 1374 aa9.48□□□□□ -0.89
CTDSPL-208ENST00000486978 COL24A1Q17RW2 1714 aa9.48□□□□□ -0.89
CTDSPL-208ENST00000486978 SPATA31E1Q6ZUB1 1445 aa9.48□□□□□ -0.89
CTDSPL-208ENST00000486978 ATP7BP35670 1465 aa9.47□□□□□ -0.89
CTDSPL-208ENST00000486978 EVA1CP58658 441 aa9.47□□□□□ -0.89
CTDSPL-208ENST00000486978 RGL3Q3MIN7 710 aa9.47□□□□□ -0.89
CTDSPL-208ENST00000486978 PELP1Q8IZL8 1130 aaKnown RBP9.47□□□□□ -0.89
CTDSPL-208ENST00000486978 DNAJC5GQ8N7S2 189 aa9.47□□□□□ -0.89
CTDSPL-208ENST00000486978 MARCH10Q8NA82 808 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL-208ENST00000486978 PRAM1Q96QH2 718 aa9.47□□□□□ -0.89
CTDSPL-208ENST00000486978 HIRIP3Q9BW71 556 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL-208ENST00000486978 PIK3C2GO75747 1445 aa9.47□□□□□ -0.89
CTDSPL-208ENST00000486978 ATP10DQ9P241 1426 aa9.47□□□□□ -0.89
CTDSPL-208ENST00000486978 STK32BQ9NY57 414 aa9.46□□□□□ -0.9
CTDSPL-208ENST00000486978 ANKRD30BQ9BXX2 1392 aa9.46□□□□□ -0.9
CTDSPL-208ENST00000486978 OVOS2A0A0G2JMS6 1433 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms