RNA–Protein interactions for RNA: ENST00000486934.1

TRA2A-207, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 417 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-207ENST00000486934 PRR7Q8TB68 274 aa11.68□□□□□ -0.54
TRA2A-207ENST00000486934 TRIM32Q13049 653 aa11.67□□□□□ -0.54
TRA2A-207ENST00000486934 PRPF38BQ5VTL8 546 aaKnown RBP11.67□□□□□ -0.54
TRA2A-207ENST00000486934 ZBTB3Q9H5J0 574 aa11.67□□□□□ -0.54
TRA2A-207ENST00000486934 GOPCQ9HD26 462 aa11.67□□□□□ -0.54
TRA2A-207ENST00000486934 J3QL48 77 aa11.66□□□□□ -0.54
TRA2A-207ENST00000486934 MRGPRX2Q96LB1 330 aa11.66□□□□□ -0.54
TRA2A-207ENST00000486934 LCE2CQ5TA81 110 aa11.65□□□□□ -0.54
TRA2A-207ENST00000486934 TERTO14746 1132 aaKnown RBP11.64□□□□□ -0.55
TRA2A-207ENST00000486934 JUNDP17535 347 aa11.64□□□□□ -0.55
TRA2A-207ENST00000486934 SENP2Q9HC62 589 aa11.64□□□□□ -0.55
TRA2A-207ENST00000486934 PER1O15534 1290 aaPredicted RBP11.63□□□□□ -0.55
TRA2A-207ENST00000486934 TRIM47Q96LD4 638 aa11.63□□□□□ -0.55
TRA2A-207ENST00000486934 PPP2R2DQ66LE6 453 aa11.62□□□□□ -0.55
TRA2A-207ENST00000486934 HPS1Q92902 700 aa11.61□□□□□ -0.55
TRA2A-207ENST00000486934 SPDYE5A6NIY4 337 aa11.6□□□□□ -0.55
TRA2A-207ENST00000486934 NUTM2BA6NNL0 878 aaPredicted RBP11.6□□□□□ -0.55
TRA2A-207ENST00000486934 NUTM2EB1AL46 878 aaPredicted RBP11.6□□□□□ -0.55
TRA2A-207ENST00000486934 NUTM2DQ5VT03 806 aaPredicted RBP11.6□□□□□ -0.55
TRA2A-207ENST00000486934 PTCRAQ6ISU1 281 aaPredicted RBP11.6□□□□□ -0.55
TRA2A-207ENST00000486934 NUTM2AQ8IVF1 878 aaPredicted RBP11.6□□□□□ -0.55
TRA2A-207ENST00000486934 PCMTD1Q96MG8 357 aaPredicted RBP11.59□□□□□ -0.55
TRA2A-207ENST00000486934 CTDSPL2Q05D32 466 aa11.58□□□□□ -0.56
TRA2A-207ENST00000486934 DESI1Q6ICB0 168 aa11.58□□□□□ -0.56
TRA2A-207ENST00000486934 RFC5P40937 340 aa11.57□□□□□ -0.56
TRA2A-207ENST00000486934 LYPD8Q6UX82 237 aa11.57□□□□□ -0.56
TRA2A-207ENST00000486934 CCDC24Q8N4L8 307 aa11.56□□□□□ -0.56
TRA2A-207ENST00000486934 KIFC2Q96AC6 838 aa11.56□□□□□ -0.56
TRA2A-207ENST00000486934 RC3H1Q5TC82 1133 aaKnown RBP11.55□□□□□ -0.56
TRA2A-207ENST00000486934 NUDT12Q9BQG2 462 aa11.55□□□□□ -0.56
TRA2A-207ENST00000486934 PTPRNQ16849 979 aa11.54□□□□□ -0.56
TRA2A-207ENST00000486934 LRRN4Q8WUT4 740 aa11.54□□□□□ -0.56
TRA2A-207ENST00000486934 TSC1Q92574 1164 aa11.54□□□□□ -0.56
TRA2A-207ENST00000486934 F12P00748 615 aaPredicted RBP11.53□□□□□ -0.56
TRA2A-207ENST00000486934 MAP10Q9P2G4 905 aa11.53□□□□□ -0.56
TRA2A-207ENST00000486934 ATP1B4Q9UN42 357 aaPredicted RBP11.53□□□□□ -0.56
TRA2A-207ENST00000486934 SKOR1P84550 965 aa11.52□□□□□ -0.57
TRA2A-207ENST00000486934 HMX1Q9NP08 348 aaPredicted RBP11.52□□□□□ -0.57
TRA2A-207ENST00000486934 CCNYL3P0C7X3 344 aa11.51□□□□□ -0.57
TRA2A-207ENST00000486934 EVA1BQ9NVM1 165 aa11.51□□□□□ -0.57
TRA2A-207ENST00000486934 AP1G2O75843 785 aa11.5□□□□□ -0.57
TRA2A-207ENST00000486934 ALDH1A1P00352 501 aa11.49□□□□□ -0.57
TRA2A-207ENST00000486934 WNT7BP56706 349 aa11.49□□□□□ -0.57
TRA2A-207ENST00000486934 EPS8L1Q8TE68 723 aa11.49□□□□□ -0.57
TRA2A-207ENST00000486934 SLC16A10Q8TF71 515 aa11.49□□□□□ -0.57
TRA2A-207ENST00000486934 KCNH2Q12809 1159 aa11.48□□□□□ -0.57
TRA2A-207ENST00000486934 TMEM132AQ24JP5 1023 aa11.48□□□□□ -0.57
TRA2A-207ENST00000486934 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
TRA2A-207ENST00000486934 HELBQ8NG08 1087 aaPredicted RBP11.46□□□□□ -0.57
TRA2A-207ENST00000486934 NXF1Q9UBU9 619 aaKnown RBP11.46□□□□□ -0.57
TRA2A-207ENST00000486934 FAM181BA6NEQ2 426 aa11.45□□□□□ -0.58
TRA2A-207ENST00000486934 UNC93B1Q9H1C4 597 aa11.45□□□□□ -0.58
TRA2A-207ENST00000486934 SNRKQ9NRH2 765 aa11.45□□□□□ -0.58
TRA2A-207ENST00000486934 BMP1P13497 986 aa11.43□□□□□ -0.58
TRA2A-207ENST00000486934 GMPRP36959 345 aa11.43□□□□□ -0.58
TRA2A-207ENST00000486934 TRIM34Q9BYJ4 488 aa11.43□□□□□ -0.58
TRA2A-207ENST00000486934 CTHP32929 405 aa11.42□□□□□ -0.58
TRA2A-207ENST00000486934 NR6A1Q15406 480 aa11.42□□□□□ -0.58
TRA2A-207ENST00000486934 GJD4Q96KN9 370 aaPredicted RBP11.42□□□□□ -0.58
TRA2A-207ENST00000486934 MTMR14Q8NCE2 650 aa11.41□□□□□ -0.58
TRA2A-207ENST00000486934 BAP1Q92560 729 aa11.41□□□□□ -0.58
TRA2A-207ENST00000486934 CAPN5O15484 640 aaPredicted RBP11.4□□□□□ -0.58
TRA2A-207ENST00000486934 SIAH2O43255 324 aa11.4□□□□□ -0.58
TRA2A-207ENST00000486934 GPR37L1O60883 481 aa11.4□□□□□ -0.58
TRA2A-207ENST00000486934 VEGFBP49765 207 aa11.4□□□□□ -0.58
TRA2A-207ENST00000486934 LINC01559Q495D7 138 aa11.4□□□□□ -0.58
TRA2A-207ENST00000486934 TMEM259Q4ZIN3 620 aa11.4□□□□□ -0.58
TRA2A-207ENST00000486934 TRIM46Q7Z4K8 759 aa11.4□□□□□ -0.58
TRA2A-207ENST00000486934 ZSCAN1Q8NBB4 408 aa11.4□□□□□ -0.58
TRA2A-207ENST00000486934 EHBP1Q8NDI1 1231 aa11.4□□□□□ -0.58
TRA2A-207ENST00000486934 IRF7Q92985 503 aa11.4□□□□□ -0.58
TRA2A-207ENST00000486934 SH3BP2P78314 561 aa11.39□□□□□ -0.59
TRA2A-207ENST00000486934 WASF2Q9Y6W5 498 aa11.39□□□□□ -0.59
TRA2A-207ENST00000486934 LORP23490 312 aaPredicted RBP11.38□□□□□ -0.59
TRA2A-207ENST00000486934 NPAS3Q8IXF0 933 aa11.38□□□□□ -0.59
TRA2A-207ENST00000486934 C4orf48Q5BLP8 95 aa11.36□□□□□ -0.59
TRA2A-207ENST00000486934 ZNF511Q8NB15 262 aa11.35□□□□□ -0.59
TRA2A-207ENST00000486934 BANK1Q8NDB2 785 aa11.35□□□□□ -0.59
TRA2A-207ENST00000486934 FOXJ1Q92949 421 aa11.35□□□□□ -0.59
TRA2A-207ENST00000486934 H3BM21 787 aa11.34□□□□□ -0.59
TRA2A-207ENST00000486934 OCSTAMPQ9BR26 566 aa11.34□□□□□ -0.59
TRA2A-207ENST00000486934 ERBB4Q15303 1308 aa11.32□□□□□ -0.6
TRA2A-207ENST00000486934 MCM6Q14566 821 aa11.31□□□□□ -0.6
TRA2A-207ENST00000486934 ZFP42Q96MM3 310 aa11.31□□□□□ -0.6
TRA2A-207ENST00000486934 SH3BP5LQ7L8J4 393 aa11.3□□□□□ -0.6
TRA2A-207ENST00000486934 FKBPLQ9UIM3 349 aa11.3□□□□□ -0.6
TRA2A-207ENST00000486934 SH3RF1Q7Z6J0 888 aa11.29□□□□□ -0.6
TRA2A-207ENST00000486934 TLL2Q9Y6L7 1015 aa11.26□□□□□ -0.61
TRA2A-207ENST00000486934 SOCS7O14512 581 aa11.25□□□□□ -0.61
TRA2A-207ENST00000486934 TBC1D2BQ9UPU7 963 aa11.25□□□□□ -0.61
TRA2A-207ENST00000486934 POM121Q96HA1 1249 aa11.24□□□□□ -0.61
TRA2A-207ENST00000486934 LOC100996750A0A140TA64 210 aa11.23□□□□□ -0.61
TRA2A-207ENST00000486934 ARMC2Q8NEN0 867 aa11.23□□□□□ -0.61
TRA2A-207ENST00000486934 C1QTNF2Q9BXJ5 285 aa11.23□□□□□ -0.61
TRA2A-207ENST00000486934 KRTAP4-6Q9BYQ5 205 aa11.23□□□□□ -0.61
TRA2A-207ENST00000486934 NNTQ13423 1086 aa11.22□□□□□ -0.61
TRA2A-207ENST00000486934 IRF5Q13568 498 aa11.22□□□□□ -0.61
TRA2A-207ENST00000486934 MRPL14Q6P1L8 145 aaKnown RBP11.22□□□□□ -0.61
TRA2A-207ENST00000486934 PDXDC2PQ6P474 469 aa11.22□□□□□ -0.61
TRA2A-207ENST00000486934 SCARF1Q14162 830 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms