RNA–Protein interactions for RNA: ENST00000486920.1

GBE1-204, Transcript of 1,4-alpha-glucan branching enzyme 1, humanhuman

TSL 3

Gene GBE1, Length 576 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBE1-204ENST00000486920 RETREG3Q86VR2 466 aa7.53□□□□□ -1.2
GBE1-204ENST00000486920 MPNDQ8N594 471 aa7.53□□□□□ -1.2
GBE1-204ENST00000486920 KDM2AQ9Y2K7 1162 aa7.53□□□□□ -1.2
GBE1-204ENST00000486920 MDM2Q00987 491 aaPredicted RBP7.52□□□□□ -1.21
GBE1-204ENST00000486920 XP32Q5T750 250 aa7.52□□□□□ -1.21
GBE1-204ENST00000486920 ADH1CP00326 375 aa7.51□□□□□ -1.21
GBE1-204ENST00000486920 NR3C2P08235 984 aa7.51□□□□□ -1.21
GBE1-204ENST00000486920 CCNYL3P0C7X3 344 aa7.51□□□□□ -1.21
GBE1-204ENST00000486920 TMEM132AQ24JP5 1023 aa7.51□□□□□ -1.21
GBE1-204ENST00000486920 ZNF511Q8NB15 262 aa7.51□□□□□ -1.21
GBE1-204ENST00000486920 WHAMMQ8TF30 809 aa7.51□□□□□ -1.21
GBE1-204ENST00000486920 EVA1BQ9NVM1 165 aa7.51□□□□□ -1.21
GBE1-204ENST00000486920 SCARF1Q14162 830 aa7.5□□□□□ -1.21
GBE1-204ENST00000486920 ZNF385CQ66K41 422 aaPredicted RBP7.5□□□□□ -1.21
GBE1-204ENST00000486920 ITPKCQ96DU7 683 aa7.5□□□□□ -1.21
GBE1-204ENST00000486920 CNTNAP3BQ96NU0 1288 aa7.5□□□□□ -1.21
GBE1-204ENST00000486920 CNTNAP3Q9BZ76 1288 aa7.5□□□□□ -1.21
GBE1-204ENST00000486920 DNMT3LQ9UJW3 386 aa7.5□□□□□ -1.21
GBE1-204ENST00000486920 RNFT1Q5M7Z0 435 aa7.49□□□□□ -1.21
GBE1-204ENST00000486920 C6orf118Q5T5N4 469 aa7.49□□□□□ -1.21
GBE1-204ENST00000486920 C14orf37Q86TY3 774 aa7.49□□□□□ -1.21
GBE1-204ENST00000486920 MS4A1P11836 297 aa7.48□□□□□ -1.21
GBE1-204ENST00000486920 VARSP26640 1264 aaKnown RBP7.48□□□□□ -1.21
GBE1-204ENST00000486920 KCNH2Q12809 1159 aa7.48□□□□□ -1.21
GBE1-204ENST00000486920 MAN1A2O60476 641 aa7.47□□□□□ -1.21
GBE1-204ENST00000486920 ARHGEF15O94989 841 aa7.47□□□□□ -1.21
GBE1-204ENST00000486920 PTPRNQ16849 979 aa7.47□□□□□ -1.21
GBE1-204ENST00000486920 GPAT2Q6NUI2 795 aa7.47□□□□□ -1.21
GBE1-204ENST00000486920 KRTAP4-8Q9BYQ9 185 aa7.47□□□□□ -1.21
GBE1-204ENST00000486920 SOS2Q07890 1332 aaPredicted RBP7.47□□□□□ -1.21
GBE1-204ENST00000486920 ZIC2O95409 532 aaPredicted RBP7.46□□□□□ -1.22
GBE1-204ENST00000486920 MAP2K5Q13163 448 aa7.46□□□□□ -1.22
GBE1-204ENST00000486920 C4orf48Q5BLP8 95 aa7.46□□□□□ -1.22
GBE1-204ENST00000486920 GPIHBP1Q8IV16 184 aa7.46□□□□□ -1.22
GBE1-204ENST00000486920 FOXJ1Q92949 421 aa7.46□□□□□ -1.22
GBE1-204ENST00000486920 CDK15Q96Q40 435 aa7.46□□□□□ -1.22
GBE1-204ENST00000486920 FAM217BQ9NTX9 383 aaPredicted RBP7.46□□□□□ -1.22
GBE1-204ENST00000486920 PLEKHG3A1L390 1219 aa7.45□□□□□ -1.22
GBE1-204ENST00000486920 IRF6O14896 467 aa7.45□□□□□ -1.22
GBE1-204ENST00000486920 FDX1P10109 184 aa7.45□□□□□ -1.22
GBE1-204ENST00000486920 GRM5P41594 1212 aa7.45□□□□□ -1.22
GBE1-204ENST00000486920 ITGB2P05107 769 aa7.44□□□□□ -1.22
GBE1-204ENST00000486920 COL25A1Q9BXS0 654 aaPredicted RBP7.44□□□□□ -1.22
GBE1-204ENST00000486920 C6orf229H3BNL8 230 aa7.43□□□□□ -1.22
GBE1-204ENST00000486920 NDUFV2P19404 249 aa7.43□□□□□ -1.22
GBE1-204ENST00000486920 IRS1P35568 1242 aa7.43□□□□□ -1.22
GBE1-204ENST00000486920 SMYD5Q6GMV2 418 aa7.43□□□□□ -1.22
GBE1-204ENST00000486920 MEIOBQ8N635 442 aa7.43□□□□□ -1.22
GBE1-204ENST00000486920 PODXL2Q9NZ53 605 aa7.43□□□□□ -1.22
GBE1-204ENST00000486920 LINC00528Q8N1L1 170 aa7.42□□□□□ -1.22
GBE1-204ENST00000486920 DNMT3AQ9Y6K1 912 aaPredicted RBP7.42□□□□□ -1.22
GBE1-204ENST00000486920 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.4□□□□□ -1.22
GBE1-204ENST00000486920 SLURP2P0DP57 97 aa7.4□□□□□ -1.22
GBE1-204ENST00000486920 BMP2P12643 396 aa7.4□□□□□ -1.22
GBE1-204ENST00000486920 PRR7Q8TB68 274 aa7.4□□□□□ -1.22
GBE1-204ENST00000486920 MOXD2PA6NHM9 499 aa7.39□□□□□ -1.23
GBE1-204ENST00000486920 PTSQ03393 145 aa7.39□□□□□ -1.23
GBE1-204ENST00000486920 SPIRE2Q8WWL2 714 aa7.39□□□□□ -1.23
GBE1-204ENST00000486920 NANOS1Q8WY41 292 aaKnown RBP7.39□□□□□ -1.23
GBE1-204ENST00000486920 CCDC102AQ96A19 550 aa7.39□□□□□ -1.23
GBE1-204ENST00000486920 RNF225M0QZC1 329 aaPredicted RBP7.38□□□□□ -1.23
GBE1-204ENST00000486920 ARID5BQ14865 1188 aa7.38□□□□□ -1.23
GBE1-204ENST00000486920 FAM174AQ8TBP5 190 aa7.38□□□□□ -1.23
GBE1-204ENST00000486920 GPCPD1Q9NPB8 672 aa7.38□□□□□ -1.23
GBE1-204ENST00000486920 NUTM1Q86Y26 1132 aa7.37□□□□□ -1.23
GBE1-204ENST00000486920 SVOPQ8N4V2 548 aa7.37□□□□□ -1.23
GBE1-204ENST00000486920 KRTAP9-2Q9BYQ4 174 aa7.37□□□□□ -1.23
GBE1-204ENST00000486920 MAP10Q9P2G4 905 aa7.37□□□□□ -1.23
GBE1-204ENST00000486920 F12P00748 615 aaPredicted RBP7.36□□□□□ -1.23
GBE1-204ENST00000486920 IGHA1P01876 353 aa7.36□□□□□ -1.23
GBE1-204ENST00000486920 DESI1Q6ICB0 168 aa7.36□□□□□ -1.23
GBE1-204ENST00000486920 FIGNL2A6NMB9 653 aa7.35□□□□□ -1.23
GBE1-204ENST00000486920 ADAM23O75077 832 aa7.35□□□□□ -1.23
GBE1-204ENST00000486920 NR5A1Q13285 461 aa7.35□□□□□ -1.23
GBE1-204ENST00000486920 LYPD8Q6UX82 237 aa7.35□□□□□ -1.23
GBE1-204ENST00000486920 MINK1Q8N4C8 1332 aaPredicted RBP7.34□□□□□ -1.23
GBE1-204ENST00000486920 KRTAP9-6A0A140TA67 174 aa7.34□□□□□ -1.23
GBE1-204ENST00000486920 CFAP99D6REC4 459 aa7.34□□□□□ -1.23
GBE1-204ENST00000486920 LYPD4Q6UWN0 246 aa7.34□□□□□ -1.23
GBE1-204ENST00000486920 CCDC155Q8N6L0 562 aa7.34□□□□□ -1.23
GBE1-204ENST00000486920 SLC35F4A4IF30 521 aa7.33□□□□□ -1.24
GBE1-204ENST00000486920 CLCN1P35523 988 aa7.33□□□□□ -1.24
GBE1-204ENST00000486920 TTLL8A6PVC2 850 aa7.32□□□□□ -1.24
GBE1-204ENST00000486920 CTHP32929 405 aa7.32□□□□□ -1.24
GBE1-204ENST00000486920 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.32□□□□□ -1.24
GBE1-204ENST00000486920 VWA5B2Q8N398 1253 aa7.32□□□□□ -1.24
GBE1-204ENST00000486920 C1QTNF2Q9BXJ5 285 aa7.32□□□□□ -1.24
GBE1-204ENST00000486920 MTMR2Q13614 643 aa7.31□□□□□ -1.24
GBE1-204ENST00000486920 PCDHB15Q9Y5E8 787 aa7.31□□□□□ -1.24
GBE1-204ENST00000486920 PER1O15534 1290 aaPredicted RBP7.3□□□□□ -1.24
GBE1-204ENST00000486920 PROCP04070 461 aa7.3□□□□□ -1.24
GBE1-204ENST00000486920 CBLBQ13191 982 aa7.3□□□□□ -1.24
GBE1-204ENST00000486920 PLA2G4EQ3MJ16 856 aa7.3□□□□□ -1.24
GBE1-204ENST00000486920 KANK3Q6NY19 840 aa7.3□□□□□ -1.24
GBE1-204ENST00000486920 TTBK1Q5TCY1 1321 aaPredicted RBP7.29□□□□□ -1.24
GBE1-204ENST00000486920 SENP3-EIF4A1A0A087X0R7 540 aa7.29□□□□□ -1.24
GBE1-204ENST00000486920 SPTLC1O15269 473 aa7.29□□□□□ -1.24
GBE1-204ENST00000486920 FSHRP23945 695 aa7.29□□□□□ -1.24
GBE1-204ENST00000486920 SSTR3P32745 418 aaPredicted RBP7.29□□□□□ -1.24
GBE1-204ENST00000486920 FOXK2Q01167 660 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms