RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 FKBPLQ9UIM3 349 aa9.66□□□□□ -0.86
LMBR1-218ENST00000486837 GPKOWQ92917 476 aaPredicted RBP eCLIP9.65□□□□□ -0.86
LMBR1-218ENST00000486837 GGCXP38435 758 aa9.64□□□□□ -0.87
LMBR1-218ENST00000486837 CCDC24Q8N4L8 307 aa9.63□□□□□ -0.87
LMBR1-218ENST00000486837 UNC93B1Q9H1C4 597 aa9.62□□□□□ -0.87
LMBR1-218ENST00000486837 FCF1Q9Y324 198 aaKnown RBP9.62□□□□□ -0.87
LMBR1-218ENST00000486837 IFFO2Q5TF58 517 aa9.61□□□□□ -0.87
LMBR1-218ENST00000486837 NBPF14Q5TI25 921 aa9.61□□□□□ -0.87
LMBR1-218ENST00000486837 ZNF777Q9ULD5 760 aaPredicted RBP9.61□□□□□ -0.87
LMBR1-218ENST00000486837 ARID3CA6NKF2 412 aa9.6□□□□□ -0.87
LMBR1-218ENST00000486837 PTCRAQ6ISU1 281 aaPredicted RBP9.6□□□□□ -0.87
LMBR1-218ENST00000486837 ANKLE1Q8NAG6 615 aa9.6□□□□□ -0.87
LMBR1-218ENST00000486837 GPSM3Q9Y4H4 160 aa9.6□□□□□ -0.87
LMBR1-218ENST00000486837 NR1H3Q13133 447 aa9.59□□□□□ -0.87
LMBR1-218ENST00000486837 PDXDC2PQ6P474 469 aa9.59□□□□□ -0.87
LMBR1-218ENST00000486837 C1orf115Q9H7X2 142 aa9.59□□□□□ -0.87
LMBR1-218ENST00000486837 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.59□□□□□ -0.87
LMBR1-218ENST00000486837 ZBBXA8MT70 800 aa9.58□□□□□ -0.88
LMBR1-218ENST00000486837 RNF223E7ERA6 249 aa9.58□□□□□ -0.88
LMBR1-218ENST00000486837 SOX11P35716 441 aa9.58□□□□□ -0.88
LMBR1-218ENST00000486837 VAC14Q08AM6 782 aa9.58□□□□□ -0.88
LMBR1-218ENST00000486837 POM121CA8CG34 1229 aa9.57□□□□□ -0.88
LMBR1-218ENST00000486837 PTK2Q05397 1052 aa9.57□□□□□ -0.88
LMBR1-218ENST00000486837 PPP1R18Q6NYC8 613 aa9.57□□□□□ -0.88
LMBR1-218ENST00000486837 PPEF1O14829 653 aaPredicted RBP9.56□□□□□ -0.88
LMBR1-218ENST00000486837 ZBTB24O43167 697 aaPredicted RBP9.55□□□□□ -0.88
LMBR1-218ENST00000486837 FBXO45P0C2W1 286 aa9.55□□□□□ -0.88
LMBR1-218ENST00000486837 EIF4G2P78344 907 aaKnown RBP eCLIP9.55□□□□□ -0.88
LMBR1-218ENST00000486837 GLMNQ92990 594 aa9.55□□□□□ -0.88
LMBR1-218ENST00000486837 ZNF592Q92610 1267 aa9.54□□□□□ -0.88
LMBR1-218ENST00000486837 SERPINA10Q9UK55 444 aa9.54□□□□□ -0.88
LMBR1-218ENST00000486837 SH3BP5LQ7L8J4 393 aa9.53□□□□□ -0.88
LMBR1-218ENST00000486837 BAP1Q92560 729 aa9.53□□□□□ -0.88
LMBR1-218ENST00000486837 CALR3Q96L12 384 aaKnown RBP9.53□□□□□ -0.88
LMBR1-218ENST00000486837 RPIAP49247 311 aa9.52□□□□□ -0.89
LMBR1-218ENST00000486837 MCCD1P59942 119 aaPredicted RBP9.52□□□□□ -0.89
LMBR1-218ENST00000486837 CCDC82Q8N4S0 544 aa9.52□□□□□ -0.89
LMBR1-218ENST00000486837 ZNF511Q8NB15 262 aa9.52□□□□□ -0.89
LMBR1-218ENST00000486837 CCDC97Q96F63 343 aaPredicted RBP9.52□□□□□ -0.89
LMBR1-218ENST00000486837 ARHGAP9Q9BRR9 750 aa9.52□□□□□ -0.89
LMBR1-218ENST00000486837 ALG2Q9H553 416 aa9.52□□□□□ -0.89
LMBR1-218ENST00000486837 SEMA3FQ13275 785 aa9.51□□□□□ -0.89
LMBR1-218ENST00000486837 PLA2G2CQ5R387 149 aa9.51□□□□□ -0.89
LMBR1-218ENST00000486837 HDGFL1Q5TGJ6 251 aa9.51□□□□□ -0.89
LMBR1-218ENST00000486837 SH3RF1Q7Z6J0 888 aa9.51□□□□□ -0.89
LMBR1-218ENST00000486837 BPHLQ86WA6 291 aaPredicted RBP9.51□□□□□ -0.89
LMBR1-218ENST00000486837 ADAMTS19Q8TE59 1207 aa9.51□□□□□ -0.89
LMBR1-218ENST00000486837 OCSTAMPQ9BR26 566 aa9.5□□□□□ -0.89
LMBR1-218ENST00000486837 TRIM32Q13049 653 aa9.49□□□□□ -0.89
LMBR1-218ENST00000486837 LINC01559Q495D7 138 aa9.49□□□□□ -0.89
LMBR1-218ENST00000486837 ZBTB33Q86T24 672 aa9.49□□□□□ -0.89
LMBR1-218ENST00000486837 PLA2G2EQ9NZK7 142 aa9.49□□□□□ -0.89
LMBR1-218ENST00000486837 WNT7BP56706 349 aa9.48□□□□□ -0.89
LMBR1-218ENST00000486837 SH3BP2P78314 561 aa9.48□□□□□ -0.89
LMBR1-218ENST00000486837 ADAM32Q8TC27 787 aa9.48□□□□□ -0.89
LMBR1-218ENST00000486837 AGERQ15109 404 aa9.47□□□□□ -0.89
LMBR1-218ENST00000486837 A0A0G2JS52 829 aa9.46□□□□□ -0.9
LMBR1-218ENST00000486837 CD2BP2O95400 341 aaKnown RBP9.46□□□□□ -0.9
LMBR1-218ENST00000486837 FOXJ1Q92949 421 aa9.46□□□□□ -0.9
LMBR1-218ENST00000486837 ARID3AQ99856 593 aa9.46□□□□□ -0.9
LMBR1-218ENST00000486837 MAGEB6P1A0A0J9YX57 407 aa9.45□□□□□ -0.9
LMBR1-218ENST00000486837 C1QTNF2Q9BXJ5 285 aa9.45□□□□□ -0.9
LMBR1-218ENST00000486837 ERFEQ4G0M1 354 aa9.44□□□□□ -0.9
LMBR1-218ENST00000486837 C4orf48Q5BLP8 95 aa9.44□□□□□ -0.9
LMBR1-218ENST00000486837 LIAT1Q6ZQX7 453 aa9.44□□□□□ -0.9
LMBR1-218ENST00000486837 CARD14Q9BXL6 1004 aa9.44□□□□□ -0.9
LMBR1-218ENST00000486837 PCDHB9Q9Y5E1 797 aa9.44□□□□□ -0.9
LMBR1-218ENST00000486837 VARSP26640 1264 aaKnown RBP9.43□□□□□ -0.9
LMBR1-218ENST00000486837 SKOR1P84550 965 aa9.43□□□□□ -0.9
LMBR1-218ENST00000486837 DZIP3Q86Y13 1208 aaKnown RBP9.43□□□□□ -0.9
LMBR1-218ENST00000486837 TRMT44Q8IYL2 757 aaKnown RBP9.43□□□□□ -0.9
LMBR1-218ENST00000486837 CDV3Q9UKY7 258 aaKnown RBP9.43□□□□□ -0.9
LMBR1-218ENST00000486837 SLC19A1P41440 591 aa9.42□□□□□ -0.9
LMBR1-218ENST00000486837 EMID1Q96A84 441 aaPredicted RBP9.42□□□□□ -0.9
LMBR1-218ENST00000486837 ARXQ96QS3 562 aa9.42□□□□□ -0.9
LMBR1-218ENST00000486837 CEP126Q9P2H0 1117 aa9.42□□□□□ -0.9
LMBR1-218ENST00000486837 NFATC2IPQ8NCF5 419 aa9.41□□□□□ -0.9
LMBR1-218ENST00000486837 SLC10A4Q96EP9 437 aa9.41□□□□□ -0.9
LMBR1-218ENST00000486837 UCN2Q96RP3 112 aa9.41□□□□□ -0.9
LMBR1-218ENST00000486837 PPP1R12CQ9BZL4 782 aa9.41□□□□□ -0.9
LMBR1-218ENST00000486837 FAM174AQ8TBP5 190 aa9.4□□□□□ -0.9
LMBR1-218ENST00000486837 PALM3A6NDB9 673 aaPredicted RBP9.39□□□□□ -0.91
LMBR1-218ENST00000486837 NBPF20Q3BBV1 942 aa9.39□□□□□ -0.91
LMBR1-218ENST00000486837 RC3H1Q5TC82 1133 aaKnown RBP9.39□□□□□ -0.91
LMBR1-218ENST00000486837 EHBP1Q8NDI1 1231 aa9.39□□□□□ -0.91
LMBR1-218ENST00000486837 ATP9BO43861 1147 aa9.38□□□□□ -0.91
LMBR1-218ENST00000486837 SLFNL1Q499Z3 407 aa9.38□□□□□ -0.91
LMBR1-218ENST00000486837 SPRYD7Q5W111 196 aa9.38□□□□□ -0.91
LMBR1-218ENST00000486837 TFIP11Q9UBB9 837 aaKnown RBP9.38□□□□□ -0.91
LMBR1-218ENST00000486837 MAP4K5Q9Y4K4 846 aa9.38□□□□□ -0.91
LMBR1-218ENST00000486837 V9GY48 417 aaPredicted RBP9.38□□□□□ -0.91
LMBR1-218ENST00000486837 CFAP70Q5T0N1 1121 aa9.37□□□□□ -0.91
LMBR1-218ENST00000486837 CCDC125Q86Z20 511 aa9.37□□□□□ -0.91
LMBR1-218ENST00000486837 PHTF2Q8N3S3 785 aa9.37□□□□□ -0.91
LMBR1-218ENST00000486837 MPNDQ8N594 471 aa9.37□□□□□ -0.91
LMBR1-218ENST00000486837 WNT7AO00755 349 aa9.36□□□□□ -0.91
LMBR1-218ENST00000486837 RNF20Q5VTR2 975 aa9.36□□□□□ -0.91
LMBR1-218ENST00000486837 TBC1D9Q6ZT07 1266 aa9.36□□□□□ -0.91
LMBR1-218ENST00000486837 ZNF598Q86UK7 904 aaKnown RBP9.36□□□□□ -0.91
LMBR1-218ENST00000486837 RNF135Q8IUD6 432 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms