RNA–Protein interactions for RNA: ENST00000486728.5

TNFRSF18-204, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF18, Length 727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-204ENST00000486728 SRPK2P78362 688 aaKnown RBP28.13■■■□□ 2.09
TNFRSF18-204ENST00000486728 ATAD2Q6PL18 1390 aa28.11■■■□□ 2.09
TNFRSF18-204ENST00000486728 PLEKHG3A1L390 1219 aa28.11■■■□□ 2.09
TNFRSF18-204ENST00000486728 NWD2Q9ULI1 1742 aa28.11■■■□□ 2.09
TNFRSF18-204ENST00000486728 TONSLQ96HA7 1378 aa28.11■■■□□ 2.09
TNFRSF18-204ENST00000486728 ACEP12821 1306 aa28.09■■■□□ 2.09
TNFRSF18-204ENST00000486728 CABP2Q9NPB3 220 aa28.08■■■□□ 2.09
TNFRSF18-204ENST00000486728 PLCH1Q4KWH8 1693 aa28.07■■■□□ 2.08
TNFRSF18-204ENST00000486728 VPS72Q15906 364 aa28.07■■■□□ 2.08
TNFRSF18-204ENST00000486728 RALGAPBQ86X10 1494 aa28.07■■■□□ 2.08
TNFRSF18-204ENST00000486728 CRYBG1Q9Y4K1 1723 aa28.06■■■□□ 2.08
TNFRSF18-204ENST00000486728 EVC2Q86UK5 1308 aa28.06■■■□□ 2.08
TNFRSF18-204ENST00000486728 PPIP5K1Q6PFW1 1433 aa28.06■■■□□ 2.08
TNFRSF18-204ENST00000486728 BRD4O60885 1362 aaPredicted RBP28.04■■■□□ 2.08
TNFRSF18-204ENST00000486728 FAM83GA6ND36 823 aa28.04■■■□□ 2.08
TNFRSF18-204ENST00000486728 COL14A1Q05707 1796 aaKnown RBP28.03■■■□□ 2.08
TNFRSF18-204ENST00000486728 CCDC9Q9Y3X0 531 aaKnown RBP28.02■■■□□ 2.08
TNFRSF18-204ENST00000486728 GLI3P10071 1580 aa28.02■■■□□ 2.08
TNFRSF18-204ENST00000486728 PRDM11Q9NQV5 511 aa27.99■■■□□ 2.07
TNFRSF18-204ENST00000486728 BTG4Q9NY30 223 aa27.99■■■□□ 2.07
TNFRSF18-204ENST00000486728 CARD11Q9BXL7 1154 aa27.98■■■□□ 2.07
TNFRSF18-204ENST00000486728 ABTB2Q8N961 1025 aa27.97■■■□□ 2.07
TNFRSF18-204ENST00000486728 NUTM2GQ5VZR2 741 aa27.96■■■□□ 2.07
TNFRSF18-204ENST00000486728 PHRF1Q9P1Y6 1649 aaKnown RBP27.96■■■□□ 2.07
TNFRSF18-204ENST00000486728 PCGF6Q9BYE7 350 aa27.95■■■□□ 2.06
TNFRSF18-204ENST00000486728 CABP1Q9NZU7 370 aa27.95■■■□□ 2.06
TNFRSF18-204ENST00000486728 NRAPQ86VF7 1730 aa27.95■■■□□ 2.06
TNFRSF18-204ENST00000486728 NLRP13Q86W25 1043 aa27.93■■■□□ 2.06
TNFRSF18-204ENST00000486728 CCDC125Q86Z20 511 aa27.93■■■□□ 2.06
TNFRSF18-204ENST00000486728 SBNO2Q9Y2G9 1366 aa27.93■■■□□ 2.06
TNFRSF18-204ENST00000486728 KIAA0232Q92628 1395 aa27.92■■■□□ 2.06
TNFRSF18-204ENST00000486728 ONECUT3O60422 494 aaPredicted RBP27.92■■■□□ 2.06
TNFRSF18-204ENST00000486728 SEPT12Q8IYM1 358 aa27.92■■■□□ 2.06
TNFRSF18-204ENST00000486728 USP6P35125 1406 aa27.92■■■□□ 2.06
TNFRSF18-204ENST00000486728 USP19O94966 1318 aa27.9■■■□□ 2.06
TNFRSF18-204ENST00000486728 AKAP12Q02952 1782 aa27.89■■■□□ 2.06
TNFRSF18-204ENST00000486728 ZNF692Q9BU19 519 aaPredicted RBP27.89■■■□□ 2.06
TNFRSF18-204ENST00000486728 ZC3H6P61129 1189 aaKnown RBP27.88■■■□□ 2.05
TNFRSF18-204ENST00000486728 BRWD3Q6RI45 1802 aa27.88■■■□□ 2.05
TNFRSF18-204ENST00000486728 NRKQ7Z2Y5 1582 aa27.87■■■□□ 2.05
TNFRSF18-204ENST00000486728 A0A0G2JS52 829 aa27.87■■■□□ 2.05
TNFRSF18-204ENST00000486728 MYT1Q01538 1121 aa27.87■■■□□ 2.05
TNFRSF18-204ENST00000486728 SPATA31A5Q5VU36 1347 aa27.86■■■□□ 2.05
TNFRSF18-204ENST00000486728 SPATA31A7Q8IWB4 1347 aa27.86■■■□□ 2.05
TNFRSF18-204ENST00000486728 CPDO75976 1380 aa27.86■■■□□ 2.05
TNFRSF18-204ENST00000486728 CHRNA2Q15822 529 aa27.84■■■□□ 2.05
TNFRSF18-204ENST00000486728 FAM98CQ17RN3 349 aaKnown RBP27.84■■■□□ 2.05
TNFRSF18-204ENST00000486728 KRT27Q7Z3Y8 459 aa27.84■■■□□ 2.05
TNFRSF18-204ENST00000486728 GCP02774 474 aa27.83■■■□□ 2.05
TNFRSF18-204ENST00000486728 NLRP6P59044 892 aa27.82■■■□□ 2.04
TNFRSF18-204ENST00000486728 SSH2Q76I76 1423 aa27.82■■■□□ 2.04
TNFRSF18-204ENST00000486728 BLMP54132 1417 aaPredicted RBP27.81■■■□□ 2.04
TNFRSF18-204ENST00000486728 PIK3C2AO00443 1686 aa27.81■■■□□ 2.04
TNFRSF18-204ENST00000486728 SLC24A1O60721 1099 aa27.8■■■□□ 2.04
TNFRSF18-204ENST00000486728 EVA1CP58658 441 aa27.8■■■□□ 2.04
TNFRSF18-204ENST00000486728 STRN4Q9NRL3 753 aa27.8■■■□□ 2.04
TNFRSF18-204ENST00000486728 TTC21AQ8NDW8 1320 aa27.79■■■□□ 2.04
TNFRSF18-204ENST00000486728 SF3B2Q13435 895 aaKnown RBP27.79■■■□□ 2.04
TNFRSF18-204ENST00000486728 EP400Q96L91 3159 aa27.79■■■□□ 2.04
TNFRSF18-204ENST00000486728 SPATA31A1Q5TZJ5 1347 aa27.78■■■□□ 2.04
TNFRSF18-204ENST00000486728 SLIT3O75094 1523 aa27.77■■■□□ 2.04
TNFRSF18-204ENST00000486728 CPSF1Q10570 1443 aaKnown RBP27.77■■■□□ 2.04
TNFRSF18-204ENST00000486728 MON2Q7Z3U7 1717 aa27.77■■■□□ 2.04
TNFRSF18-204ENST00000486728 KTN1Q86UP2 1357 aaKnown RBP27.76■■■□□ 2.03
TNFRSF18-204ENST00000486728 TTC21BQ7Z4L5 1316 aa27.76■■■□□ 2.03
TNFRSF18-204ENST00000486728 ST20-MTHFSA0A0A6YYL1 179 aa27.76■■■□□ 2.03
TNFRSF18-204ENST00000486728 PUS7Q96PZ0 661 aaKnown RBP27.76■■■□□ 2.03
TNFRSF18-204ENST00000486728 LMO7Q8WWI1 1683 aa27.75■■■□□ 2.03
TNFRSF18-204ENST00000486728 KCNH5Q8NCM2 988 aa27.74■■■□□ 2.03
TNFRSF18-204ENST00000486728 TESK2Q96S53 571 aa27.74■■■□□ 2.03
TNFRSF18-204ENST00000486728 CLSPNQ9HAW4 1339 aa27.73■■■□□ 2.03
TNFRSF18-204ENST00000486728 THSD7AQ9UPZ6 1657 aa27.73■■■□□ 2.03
TNFRSF18-204ENST00000486728 CAMTA1Q9Y6Y1 1673 aa27.72■■■□□ 2.03
TNFRSF18-204ENST00000486728 CD163L1Q9NR16 1453 aa27.71■■■□□ 2.03
TNFRSF18-204ENST00000486728 HDGFL2Q7Z4V5 671 aaPredicted RBP27.71■■■□□ 2.03
TNFRSF18-204ENST00000486728 BARGINQ6ZT62 677 aa27.7■■■□□ 2.02
TNFRSF18-204ENST00000486728 TMC1Q8TDI8 760 aa27.7■■■□□ 2.02
TNFRSF18-204ENST00000486728 TIMELESSQ9UNS1 1208 aa27.7■■■□□ 2.02
TNFRSF18-204ENST00000486728 THRAP3Q9Y2W1 955 aaKnown RBP27.7■■■□□ 2.02
TNFRSF18-204ENST00000486728 AATKQ6ZMQ8 1374 aa27.7■■■□□ 2.02
TNFRSF18-204ENST00000486728 SLC12A5Q9H2X9 1139 aa27.69■■■□□ 2.02
TNFRSF18-204ENST00000486728 COL5A2P05997 1499 aaPredicted RBP27.69■■■□□ 2.02
TNFRSF18-204ENST00000486728 ZBTB7CA1YPR0 619 aa27.68■■■□□ 2.02
TNFRSF18-204ENST00000486728 LARP1Q6PKG0 1096 aaKnown RBP27.68■■■□□ 2.02
TNFRSF18-204ENST00000486728 TCP11L2Q8N4U5 519 aa27.68■■■□□ 2.02
TNFRSF18-204ENST00000486728 USP35Q9P2H5 1018 aa27.68■■■□□ 2.02
TNFRSF18-204ENST00000486728 NINLQ9Y2I6 1382 aa27.68■■■□□ 2.02
TNFRSF18-204ENST00000486728 TERF2IPQ9NYB0 399 aa27.67■■■□□ 2.02
TNFRSF18-204ENST00000486728 ZRANB1Q9UGI0 708 aa27.67■■■□□ 2.02
TNFRSF18-204ENST00000486728 USP47Q96K76 1375 aa27.66■■■□□ 2.02
TNFRSF18-204ENST00000486728 CCER1Q8TC90 406 aaPredicted RBP27.66■■■□□ 2.02
TNFRSF18-204ENST00000486728 RGPD5Q99666 1765 aa27.65■■■□□ 2.02
TNFRSF18-204ENST00000486728 COL18A1P39060 1754 aa27.65■■■□□ 2.02
TNFRSF18-204ENST00000486728 CRB1P82279 1406 aa27.65■■■□□ 2.02
TNFRSF18-204ENST00000486728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.64■■■□□ 2.02
TNFRSF18-204ENST00000486728 EDC4Q6P2E9 1401 aaKnown RBP27.63■■■□□ 2.01
TNFRSF18-204ENST00000486728 BAG6P46379 1132 aa27.62■■■□□ 2.01
TNFRSF18-204ENST00000486728 USP31Q70CQ4 1352 aa27.61■■■□□ 2.01
TNFRSF18-204ENST00000486728 PDE3BQ13370 1112 aa27.61■■■□□ 2.01
TNFRSF18-204ENST00000486728 ARHGEF25Q86VW2 580 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms