RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 HPS1Q92902 700 aa8.48□□□□□ -1.05
R3HDM1-217ENST00000486532 HRCP23327 699 aa8.47□□□□□ -1.05
R3HDM1-217ENST00000486532 ZNF511Q8NB15 262 aa8.47□□□□□ -1.05
R3HDM1-217ENST00000486532 RSPH6AQ9H0K4 717 aa8.47□□□□□ -1.05
R3HDM1-217ENST00000486532 ARMC2Q8NEN0 867 aa8.46□□□□□ -1.06
R3HDM1-217ENST00000486532 BAP1Q92560 729 aa8.46□□□□□ -1.06
R3HDM1-217ENST00000486532 TRIM47Q96LD4 638 aa8.46□□□□□ -1.06
R3HDM1-217ENST00000486532 NUTM2BA6NNL0 878 aaPredicted RBP8.45□□□□□ -1.06
R3HDM1-217ENST00000486532 NUTM2EB1AL46 878 aaPredicted RBP8.45□□□□□ -1.06
R3HDM1-217ENST00000486532 LINC01559Q495D7 138 aa8.45□□□□□ -1.06
R3HDM1-217ENST00000486532 NUTM2DQ5VT03 806 aaPredicted RBP8.45□□□□□ -1.06
R3HDM1-217ENST00000486532 NUTM2AQ8IVF1 878 aaPredicted RBP8.45□□□□□ -1.06
R3HDM1-217ENST00000486532 FAM174AQ8TBP5 190 aa8.45□□□□□ -1.06
R3HDM1-217ENST00000486532 CAPN5O15484 640 aaPredicted RBP8.44□□□□□ -1.06
R3HDM1-217ENST00000486532 HELBQ8NG08 1087 aaPredicted RBP8.44□□□□□ -1.06
R3HDM1-217ENST00000486532 PCDHB15Q9Y5E8 787 aa8.44□□□□□ -1.06
R3HDM1-217ENST00000486532 SLC24A3Q9HC58 644 aa8.43□□□□□ -1.06
R3HDM1-217ENST00000486532 CFAP99D6REC4 459 aa8.42□□□□□ -1.06
R3HDM1-217ENST00000486532 MYSM1Q5VVJ2 828 aa8.42□□□□□ -1.06
R3HDM1-217ENST00000486532 F12P00748 615 aaPredicted RBP8.41□□□□□ -1.06
R3HDM1-217ENST00000486532 CSPP1Q1MSJ5 1256 aa8.41□□□□□ -1.06
R3HDM1-217ENST00000486532 TSC1Q92574 1164 aa8.41□□□□□ -1.06
R3HDM1-217ENST00000486532 CLK2P49760 499 aaKnown RBP8.4□□□□□ -1.06
R3HDM1-217ENST00000486532 AGERQ15109 404 aa8.4□□□□□ -1.06
R3HDM1-217ENST00000486532 NBPF14Q5TI25 921 aa8.4□□□□□ -1.06
R3HDM1-217ENST00000486532 BPHLQ86WA6 291 aaPredicted RBP8.4□□□□□ -1.06
R3HDM1-217ENST00000486532 LILRB3O75022 631 aa8.39□□□□□ -1.07
R3HDM1-217ENST00000486532 CABLES1Q8TDN4 633 aa8.39□□□□□ -1.07
R3HDM1-217ENST00000486532 SLC16A10Q8TF71 515 aa8.39□□□□□ -1.07
R3HDM1-217ENST00000486532 ADH1CP00326 375 aa8.38□□□□□ -1.07
R3HDM1-217ENST00000486532 SNRPBP14678 240 aaKnown RBP8.38□□□□□ -1.07
R3HDM1-217ENST00000486532 NNTQ13423 1086 aa8.38□□□□□ -1.07
R3HDM1-217ENST00000486532 SCARF1Q14162 830 aa8.38□□□□□ -1.07
R3HDM1-217ENST00000486532 CDK15Q96Q40 435 aa8.38□□□□□ -1.07
R3HDM1-217ENST00000486532 LIMD1Q9UGP4 676 aa8.38□□□□□ -1.07
R3HDM1-217ENST00000486532 TLL2Q9Y6L7 1015 aa8.38□□□□□ -1.07
R3HDM1-217ENST00000486532 TERTO14746 1132 aaKnown RBP8.37□□□□□ -1.07
R3HDM1-217ENST00000486532 NR5A1Q13285 461 aa8.37□□□□□ -1.07
R3HDM1-217ENST00000486532 NPAS3Q8IXF0 933 aa8.37□□□□□ -1.07
R3HDM1-217ENST00000486532 GPKOWQ92917 476 aaPredicted RBP eCLIP8.37□□□□□ -1.07
R3HDM1-217ENST00000486532 MAP10Q9P2G4 905 aa8.37□□□□□ -1.07
R3HDM1-217ENST00000486532 FAM181BA6NEQ2 426 aa8.36□□□□□ -1.07
R3HDM1-217ENST00000486532 BCANQ96GW7 911 aa8.36□□□□□ -1.07
R3HDM1-217ENST00000486532 LOC100996750A0A140TA64 210 aa8.35□□□□□ -1.07
R3HDM1-217ENST00000486532 QPCTQ16769 361 aa8.35□□□□□ -1.07
R3HDM1-217ENST00000486532 DDRGK1Q96HY6 314 aa8.35□□□□□ -1.07
R3HDM1-217ENST00000486532 KRTAP4-6Q9BYQ5 205 aa8.35□□□□□ -1.07
R3HDM1-217ENST00000486532 SLC24A1O60721 1099 aa8.34□□□□□ -1.07
R3HDM1-217ENST00000486532 WDR4P57081 412 aaKnown RBP8.34□□□□□ -1.07
R3HDM1-217ENST00000486532 ARID5BQ14865 1188 aa8.34□□□□□ -1.07
R3HDM1-217ENST00000486532 LCE2CQ5TA81 110 aa8.34□□□□□ -1.07
R3HDM1-217ENST00000486532 FOXJ1Q92949 421 aa8.34□□□□□ -1.07
R3HDM1-217ENST00000486532 PER1O15534 1290 aaPredicted RBP8.33□□□□□ -1.08
R3HDM1-217ENST00000486532 TRIM46Q7Z4K8 759 aa8.33□□□□□ -1.08
R3HDM1-217ENST00000486532 NXF1Q9UBU9 619 aaKnown RBP8.33□□□□□ -1.08
R3HDM1-217ENST00000486532 UPP2O95045 317 aa8.32□□□□□ -1.08
R3HDM1-217ENST00000486532 BMP1P13497 986 aa8.32□□□□□ -1.08
R3HDM1-217ENST00000486532 MRPL14Q6P1L8 145 aaKnown RBP8.32□□□□□ -1.08
R3HDM1-217ENST00000486532 TIMP2P16035 220 aa8.31□□□□□ -1.08
R3HDM1-217ENST00000486532 SKIV2LQ15477 1246 aaKnown RBP8.31□□□□□ -1.08
R3HDM1-217ENST00000486532 PNMA1Q8ND90 353 aa8.31□□□□□ -1.08
R3HDM1-217ENST00000486532 POLR3EQ9NVU0 708 aa8.31□□□□□ -1.08
R3HDM1-217ENST00000486532 ATP1B4Q9UN42 357 aaPredicted RBP8.31□□□□□ -1.08
R3HDM1-217ENST00000486532 MAP4K5Q9Y4K4 846 aa8.31□□□□□ -1.08
R3HDM1-217ENST00000486532 SH3D19Q5HYK7 790 aa8.3□□□□□ -1.08
R3HDM1-217ENST00000486532 RTL5Q5HYW3 569 aaPredicted RBP8.3□□□□□ -1.08
R3HDM1-217ENST00000486532 TRMT44Q8IYL2 757 aaKnown RBP8.3□□□□□ -1.08
R3HDM1-217ENST00000486532 ZFP42Q96MM3 310 aa8.3□□□□□ -1.08
R3HDM1-217ENST00000486532 CDV3Q9UKY7 258 aaKnown RBP8.3□□□□□ -1.08
R3HDM1-217ENST00000486532 ZC3H4Q9UPT8 1303 aaKnown RBP8.29□□□□□ -1.08
R3HDM1-217ENST00000486532 SH3RF1Q7Z6J0 888 aa8.29□□□□□ -1.08
R3HDM1-217ENST00000486532 IRF7Q92985 503 aa8.29□□□□□ -1.08
R3HDM1-217ENST00000486532 C1QTNF2Q9BXJ5 285 aa8.29□□□□□ -1.08
R3HDM1-217ENST00000486532 ZIC2O95409 532 aaPredicted RBP8.28□□□□□ -1.08
R3HDM1-217ENST00000486532 VASH1Q7L8A9 365 aaPredicted RBP8.28□□□□□ -1.08
R3HDM1-217ENST00000486532 PDXDC2PQ6P474 469 aa8.27□□□□□ -1.09
R3HDM1-217ENST00000486532 SH3BP5LQ7L8J4 393 aa8.27□□□□□ -1.09
R3HDM1-217ENST00000486532 KLF16Q9BXK1 252 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-217ENST00000486532 KDM4CQ9H3R0 1056 aa8.27□□□□□ -1.09
R3HDM1-217ENST00000486532 EMILIN1Q9Y6C2 1016 aa8.27□□□□□ -1.09
R3HDM1-217ENST00000486532 MAGEB6P1A0A0J9YX57 407 aa8.26□□□□□ -1.09
R3HDM1-217ENST00000486532 GRM5P41594 1212 aa8.26□□□□□ -1.09
R3HDM1-217ENST00000486532 C4orf48Q5BLP8 95 aa8.26□□□□□ -1.09
R3HDM1-217ENST00000486532 PPP2R2DQ66LE6 453 aa8.26□□□□□ -1.09
R3HDM1-217ENST00000486532 PURBQ96QR8 312 aaKnown RBP8.26□□□□□ -1.09
R3HDM1-217ENST00000486532 TRIM52Q96A61 297 aa8.25□□□□□ -1.09
R3HDM1-217ENST00000486532 ITPKCQ96DU7 683 aa8.25□□□□□ -1.09
R3HDM1-217ENST00000486532 FKBPLQ9UIM3 349 aa8.25□□□□□ -1.09
R3HDM1-217ENST00000486532 FSHRP23945 695 aa8.24□□□□□ -1.09
R3HDM1-217ENST00000486532 CTDSPL2Q05D32 466 aa8.24□□□□□ -1.09
R3HDM1-217ENST00000486532 ZBTB33Q86T24 672 aa8.24□□□□□ -1.09
R3HDM1-217ENST00000486532 CCDC116Q8IYX3 515 aa8.24□□□□□ -1.09
R3HDM1-217ENST00000486532 ARHGAP9Q9BRR9 750 aa8.24□□□□□ -1.09
R3HDM1-217ENST00000486532 PGPEP1Q9NXJ5 209 aa8.24□□□□□ -1.09
R3HDM1-217ENST00000486532 GPSM3Q9Y4H4 160 aa8.24□□□□□ -1.09
R3HDM1-217ENST00000486532 MAN1A2O60476 641 aa8.23□□□□□ -1.09
R3HDM1-217ENST00000486532 DHX9Q08211 1270 aaKnown RBP8.23□□□□□ -1.09
R3HDM1-217ENST00000486532 ZSCAN1Q8NBB4 408 aa8.23□□□□□ -1.09
R3HDM1-217ENST00000486532 SLC10A4Q96EP9 437 aa8.23□□□□□ -1.09
R3HDM1-217ENST00000486532 TSEN34Q9BSV6 310 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms