RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 NUDT16Q96DE0 195 aaKnown RBP26.7■■□□□ 1.86
HPS3-206ENST00000486530 NCBP3Q53F19 620 aaKnown RBP26.69■■□□□ 1.86
HPS3-206ENST00000486530 TOPAZ1Q8N9V7 1692 aa26.69■■□□□ 1.86
HPS3-206ENST00000486530 PTCH1Q13635 1447 aa26.68■■□□□ 1.86
HPS3-206ENST00000486530 WWC1Q8IX03 1113 aa26.68■■□□□ 1.86
HPS3-206ENST00000486530 EXOC6Q8TAG9 804 aa26.68■■□□□ 1.86
HPS3-206ENST00000486530 CCDC61Q9Y6R9 512 aa26.68■■□□□ 1.86
HPS3-206ENST00000486530 PIK3R4Q99570 1358 aa26.67■■□□□ 1.86
HPS3-206ENST00000486530 TCP11L2Q8N4U5 519 aa26.67■■□□□ 1.86
HPS3-206ENST00000486530 U2AF1L5P0DN76 240 aaPredicted RBP26.66■■□□□ 1.86
HPS3-206ENST00000486530 U2AF1Q01081 240 aaKnown RBP eCLIP26.66■■□□□ 1.86
HPS3-206ENST00000486530 PNPLA6Q8IY17 1366 aa26.66■■□□□ 1.86
HPS3-206ENST00000486530 KDM4FA0A1W2PPD8 638 aa26.66■■□□□ 1.86
HPS3-206ENST00000486530 SPINK5Q9NQ38 1064 aaPredicted RBP26.66■■□□□ 1.86
HPS3-206ENST00000486530 PHF23Q9BUL5 403 aaPredicted RBP26.65■■□□□ 1.86
HPS3-206ENST00000486530 PRR36Q9H6K5 1346 aa26.64■■□□□ 1.86
HPS3-206ENST00000486530 CCDC27Q2M243 656 aa26.64■■□□□ 1.86
HPS3-206ENST00000486530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.64■■□□□ 1.86
HPS3-206ENST00000486530 MAP2P11137 1827 aaKnown RBP26.64■■□□□ 1.86
HPS3-206ENST00000486530 XRN1Q8IZH2 1706 aaKnown RBP26.63■■□□□ 1.85
HPS3-206ENST00000486530 NCKAP5LQ9HCH0 1330 aa26.63■■□□□ 1.85
HPS3-206ENST00000486530 PLIN1O60240 522 aa26.62■■□□□ 1.85
HPS3-206ENST00000486530 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.62■■□□□ 1.85
HPS3-206ENST00000486530 KCNA6P17658 529 aa26.61■■□□□ 1.85
HPS3-206ENST00000486530 DMRT2Q9Y5R5 561 aa26.61■■□□□ 1.85
HPS3-206ENST00000486530 WDR63Q8IWG1 891 aa26.6■■□□□ 1.85
HPS3-206ENST00000486530 NRKQ7Z2Y5 1582 aa26.6■■□□□ 1.85
HPS3-206ENST00000486530 ZNF692Q9BU19 519 aaPredicted RBP26.59■■□□□ 1.85
HPS3-206ENST00000486530 RBM19Q9Y4C8 960 aaKnown RBP26.59■■□□□ 1.85
HPS3-206ENST00000486530 DIAPH1O60610 1272 aaKnown RBP26.58■■□□□ 1.85
HPS3-206ENST00000486530 RRP7AQ9Y3A4 280 aaKnown RBP26.58■■□□□ 1.85
HPS3-206ENST00000486530 U2SURPO15042 1029 aaKnown RBP26.57■■□□□ 1.84
HPS3-206ENST00000486530 NEUROD2Q15784 382 aa26.57■■□□□ 1.84
HPS3-206ENST00000486530 AATKQ6ZMQ8 1374 aa26.56■■□□□ 1.84
HPS3-206ENST00000486530 CRBNQ96SW2 442 aa26.55■■□□□ 1.84
HPS3-206ENST00000486530 NPHP4O75161 1426 aaPredicted RBP26.55■■□□□ 1.84
HPS3-206ENST00000486530 PLEKHF1Q96S99 279 aa26.55■■□□□ 1.84
HPS3-206ENST00000486530 POLKQ9UBT6 870 aa26.55■■□□□ 1.84
HPS3-206ENST00000486530 CDK12Q9NYV4 1490 aaPredicted RBP26.54■■□□□ 1.84
HPS3-206ENST00000486530 NME9Q86XW9 330 aa26.54■■□□□ 1.84
HPS3-206ENST00000486530 PNNQ9H307 717 aaKnown RBP26.54■■□□□ 1.84
HPS3-206ENST00000486530 PLEKHG3A1L390 1219 aa26.53■■□□□ 1.84
HPS3-206ENST00000486530 CHD2O14647 1828 aaKnown RBP26.53■■□□□ 1.84
HPS3-206ENST00000486530 MAPK8IP3Q9UPT6 1336 aa26.52■■□□□ 1.84
HPS3-206ENST00000486530 COG3Q96JB2 828 aa26.51■■□□□ 1.83
HPS3-206ENST00000486530 NUTM2FA1L443 756 aa26.51■■□□□ 1.83
HPS3-206ENST00000486530 LRRC7Q96NW7 1537 aa26.5■■□□□ 1.83
HPS3-206ENST00000486530 C20orf194Q5TEA3 1177 aa26.5■■□□□ 1.83
HPS3-206ENST00000486530 NALCNQ8IZF0 1738 aa26.47■■□□□ 1.83
HPS3-206ENST00000486530 MYH16Q9H6N6 1097 aa26.47■■□□□ 1.83
HPS3-206ENST00000486530 ACEP12821 1306 aa26.47■■□□□ 1.83
HPS3-206ENST00000486530 USP6P35125 1406 aa26.47■■□□□ 1.83
HPS3-206ENST00000486530 TMPOP42166 694 aaKnown RBP26.47■■□□□ 1.83
HPS3-206ENST00000486530 FCHSD2O94868 740 aa26.46■■□□□ 1.83
HPS3-206ENST00000486530 PPM1GO15355 546 aaPredicted RBP26.45■■□□□ 1.83
HPS3-206ENST00000486530 ZRANB1Q9UGI0 708 aa26.45■■□□□ 1.82
HPS3-206ENST00000486530 TTC21BQ7Z4L5 1316 aa26.44■■□□□ 1.82
HPS3-206ENST00000486530 RGPD8O14715 1765 aaPredicted RBP26.44■■□□□ 1.82
HPS3-206ENST00000486530 BCAR3O75815 825 aa26.44■■□□□ 1.82
HPS3-206ENST00000486530 EMILIN1Q9Y6C2 1016 aa26.43■■□□□ 1.82
HPS3-206ENST00000486530 OVOS2A0A0J9YW53 1432 aa26.43■■□□□ 1.82
HPS3-206ENST00000486530 OVOS2Q6IE36 1432 aa26.43■■□□□ 1.82
HPS3-206ENST00000486530 FBLN1P23142 703 aa26.42■■□□□ 1.82
HPS3-206ENST00000486530 FMN2Q9NZ56 1722 aa26.41■■□□□ 1.82
HPS3-206ENST00000486530 RSPH6AQ9H0K4 717 aa26.4■■□□□ 1.82
HPS3-206ENST00000486530 TRIM35Q9UPQ4 493 aa26.4■■□□□ 1.82
HPS3-206ENST00000486530 IL16Q14005 1332 aa26.4■■□□□ 1.82
HPS3-206ENST00000486530 SSH2Q76I76 1423 aa26.4■■□□□ 1.82
HPS3-206ENST00000486530 ANKARQ7Z5J8 1434 aa26.4■■□□□ 1.82
HPS3-206ENST00000486530 NEFMP07197 916 aa26.39■■□□□ 1.82
HPS3-206ENST00000486530 HSPA2P54652 639 aa26.39■■□□□ 1.82
HPS3-206ENST00000486530 IL13P35225 146 aa26.38■■□□□ 1.81
HPS3-206ENST00000486530 PMFBP1Q8TBY8 1022 aa26.38■■□□□ 1.81
HPS3-206ENST00000486530 PDE3AQ14432 1141 aa26.38■■□□□ 1.81
HPS3-206ENST00000486530 RBM33Q96EV2 1170 aaKnown RBP26.38■■□□□ 1.81
HPS3-206ENST00000486530 RARSP54136 660 aaKnown RBP26.37■■□□□ 1.81
HPS3-206ENST00000486530 RIPK4P57078 832 aa26.37■■□□□ 1.81
HPS3-206ENST00000486530 CT47B1P0C2W7 299 aaPredicted RBP26.36■■□□□ 1.81
HPS3-206ENST00000486530 PRKAR2BP31323 418 aa26.36■■□□□ 1.81
HPS3-206ENST00000486530 TTC21AQ8NDW8 1320 aa26.36■■□□□ 1.81
HPS3-206ENST00000486530 FANCIQ9NVI1 1328 aa26.35■■□□□ 1.81
HPS3-206ENST00000486530 RRS1Q15050 365 aaKnown RBP26.35■■□□□ 1.81
HPS3-206ENST00000486530 USP31Q70CQ4 1352 aa26.34■■□□□ 1.81
HPS3-206ENST00000486530 CANXP27824 592 aaKnown RBP26.34■■□□□ 1.81
HPS3-206ENST00000486530 NWD1Q149M9 1564 aa26.33■■□□□ 1.81
HPS3-206ENST00000486530 NGDNQ8NEJ9 315 aaKnown RBP26.33■■□□□ 1.81
HPS3-206ENST00000486530 ADGRL3Q9HAR2 1447 aa26.33■■□□□ 1.8
HPS3-206ENST00000486530 KDM2BQ8NHM5 1336 aa26.31■■□□□ 1.8
HPS3-206ENST00000486530 TCERG1O14776 1098 aaKnown RBP26.3■■□□□ 1.8
HPS3-206ENST00000486530 PEAK1Q9H792 1746 aa26.3■■□□□ 1.8
HPS3-206ENST00000486530 HMOX1P09601 288 aa26.3■■□□□ 1.8
HPS3-206ENST00000486530 NFE2L2Q16236 605 aa26.3■■□□□ 1.8
HPS3-206ENST00000486530 CENPQQ7L2Z9 268 aaPredicted RBP26.3■■□□□ 1.8
HPS3-206ENST00000486530 PIK3C2AO00443 1686 aa26.29■■□□□ 1.8
HPS3-206ENST00000486530 DLG5Q8TDM6 1919 aa26.29■■□□□ 1.8
HPS3-206ENST00000486530 TSR2Q969E8 191 aaKnown RBP26.28■■□□□ 1.8
HPS3-206ENST00000486530 USP54Q70EL1 1684 aa26.28■■□□□ 1.8
HPS3-206ENST00000486530 PROSER2Q86WR7 435 aaPredicted RBP26.26■■□□□ 1.79
HPS3-206ENST00000486530 RGPD1P0DJD0 1748 aa26.26■■□□□ 1.79
HPS3-206ENST00000486530 FRAT1Q92837 279 aaPredicted RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms