RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 ZNF511Q8NB15 262 aa11.72□□□□□ -0.53
LTN1-206ENST00000486427 IRX2Q9BZI1 471 aaPredicted RBP11.72□□□□□ -0.53
LTN1-206ENST00000486427 PDZRN3Q9UPQ7 1066 aa11.72□□□□□ -0.53
LTN1-206ENST00000486427 RC3H1Q5TC82 1133 aaKnown RBP11.71□□□□□ -0.53
LTN1-206ENST00000486427 BANK1Q8NDB2 785 aa11.71□□□□□ -0.53
LTN1-206ENST00000486427 TRIM34Q9BYJ4 488 aa11.71□□□□□ -0.53
LTN1-206ENST00000486427 SNRKQ9NRH2 765 aa11.71□□□□□ -0.53
LTN1-206ENST00000486427 WNT7AO00755 349 aa11.7□□□□□ -0.54
LTN1-206ENST00000486427 GFRA3O60609 400 aa11.7□□□□□ -0.54
LTN1-206ENST00000486427 PRR20EP86478 221 aa11.7□□□□□ -0.54
LTN1-206ENST00000486427 PRR20CP86479 221 aa11.7□□□□□ -0.54
LTN1-206ENST00000486427 PRR20DP86480 221 aa11.7□□□□□ -0.54
LTN1-206ENST00000486427 PRR20BP86481 221 aa11.7□□□□□ -0.54
LTN1-206ENST00000486427 PRR20AP86496 221 aa11.7□□□□□ -0.54
LTN1-206ENST00000486427 GJD4Q96KN9 370 aaPredicted RBP11.69□□□□□ -0.54
LTN1-206ENST00000486427 MTMR14Q8NCE2 650 aa11.68□□□□□ -0.54
LTN1-206ENST00000486427 FOXJ1Q92949 421 aa11.68□□□□□ -0.54
LTN1-206ENST00000486427 MRGPRX2Q96LB1 330 aa11.68□□□□□ -0.54
LTN1-206ENST00000486427 ARMC2Q8NEN0 867 aa11.67□□□□□ -0.54
LTN1-206ENST00000486427 FKBPLQ9UIM3 349 aa11.66□□□□□ -0.54
LTN1-206ENST00000486427 NRG2O14511 850 aaPredicted RBP11.65□□□□□ -0.54
LTN1-206ENST00000486427 C4orf48Q5BLP8 95 aa11.65□□□□□ -0.54
LTN1-206ENST00000486427 NBPF14Q5TI25 921 aa11.64□□□□□ -0.55
LTN1-206ENST00000486427 EHBP1Q8NDI1 1231 aa11.64□□□□□ -0.55
LTN1-206ENST00000486427 TOR4AQ9NXH8 423 aa11.64□□□□□ -0.55
LTN1-206ENST00000486427 SIAH2O43255 324 aa11.63□□□□□ -0.55
LTN1-206ENST00000486427 SH3BP5LQ7L8J4 393 aa11.63□□□□□ -0.55
LTN1-206ENST00000486427 LAPTM4AQ15012 233 aa11.61□□□□□ -0.55
LTN1-206ENST00000486427 SH3RF1Q7Z6J0 888 aa11.61□□□□□ -0.55
LTN1-206ENST00000486427 CYP4X1Q8N118 509 aa11.61□□□□□ -0.55
LTN1-206ENST00000486427 GPKOWQ92917 476 aaPredicted RBP eCLIP11.61□□□□□ -0.55
LTN1-206ENST00000486427 SOCS7O14512 581 aa11.6□□□□□ -0.55
LTN1-206ENST00000486427 AGERQ15109 404 aa11.6□□□□□ -0.55
LTN1-206ENST00000486427 BPHLQ86WA6 291 aaPredicted RBP11.6□□□□□ -0.55
LTN1-206ENST00000486427 ZC3H4Q9UPT8 1303 aaKnown RBP11.6□□□□□ -0.55
LTN1-206ENST00000486427 GPR37L1O60883 481 aa11.59□□□□□ -0.55
LTN1-206ENST00000486427 VARSP26640 1264 aaKnown RBP11.59□□□□□ -0.55
LTN1-206ENST00000486427 MCM6Q14566 821 aa11.59□□□□□ -0.55
LTN1-206ENST00000486427 PDXDC2PQ6P474 469 aa11.59□□□□□ -0.55
LTN1-206ENST00000486427 SNIP1Q8TAD8 396 aaKnown RBP11.59□□□□□ -0.55
LTN1-206ENST00000486427 OCSTAMPQ9BR26 566 aa11.59□□□□□ -0.55
LTN1-206ENST00000486427 TTC24A2A3L6 582 aaPredicted RBP11.58□□□□□ -0.56
LTN1-206ENST00000486427 J3QL48 77 aa11.58□□□□□ -0.56
LTN1-206ENST00000486427 TLL2Q9Y6L7 1015 aa11.58□□□□□ -0.56
LTN1-206ENST00000486427 MAGEB6P1A0A0J9YX57 407 aa11.57□□□□□ -0.56
LTN1-206ENST00000486427 CARD14Q9BXL6 1004 aa11.57□□□□□ -0.56
LTN1-206ENST00000486427 FAM187AA6NFU0 413 aa11.56□□□□□ -0.56
LTN1-206ENST00000486427 SMPD1P17405 629 aa11.56□□□□□ -0.56
LTN1-206ENST00000486427 C1QTNF2Q9BXJ5 285 aa11.56□□□□□ -0.56
LTN1-206ENST00000486427 ALDH1A1P00352 501 aa11.55□□□□□ -0.56
LTN1-206ENST00000486427 PNMA1Q8ND90 353 aa11.55□□□□□ -0.56
LTN1-206ENST00000486427 FAM174AQ8TBP5 190 aa11.55□□□□□ -0.56
LTN1-206ENST00000486427 ARHGAP9Q9BRR9 750 aa11.55□□□□□ -0.56
LTN1-206ENST00000486427 NDUFB9Q9Y6M9 179 aa11.55□□□□□ -0.56
LTN1-206ENST00000486427 Q6ZNB5 142 aa11.54□□□□□ -0.56
LTN1-206ENST00000486427 TBC1D2BQ9UPU7 963 aa11.54□□□□□ -0.56
LTN1-206ENST00000486427 LCE2BO14633 110 aa11.53□□□□□ -0.56
LTN1-206ENST00000486427 PTK2Q05397 1052 aa11.53□□□□□ -0.56
LTN1-206ENST00000486427 ERFEQ4G0M1 354 aa11.53□□□□□ -0.56
LTN1-206ENST00000486427 APBB1O00213 710 aa11.52□□□□□ -0.57
LTN1-206ENST00000486427 DGAT1O75907 488 aa11.52□□□□□ -0.57
LTN1-206ENST00000486427 GPSM3Q9Y4H4 160 aa11.52□□□□□ -0.57
LTN1-206ENST00000486427 PKDCCQ504Y2 493 aa11.51□□□□□ -0.57
LTN1-206ENST00000486427 MPNDQ8N594 471 aa11.51□□□□□ -0.57
LTN1-206ENST00000486427 ADAM32Q8TC27 787 aa11.51□□□□□ -0.57
LTN1-206ENST00000486427 ARID5BQ14865 1188 aa11.5□□□□□ -0.57
LTN1-206ENST00000486427 ZBTB33Q86T24 672 aa11.5□□□□□ -0.57
LTN1-206ENST00000486427 TRMT44Q8IYL2 757 aaKnown RBP11.5□□□□□ -0.57
LTN1-206ENST00000486427 CDK15Q96Q40 435 aa11.5□□□□□ -0.57
LTN1-206ENST00000486427 FBXO45P0C2W1 286 aa11.49□□□□□ -0.57
LTN1-206ENST00000486427 HPS1Q92902 700 aa11.49□□□□□ -0.57
LTN1-206ENST00000486427 GDPD2Q9HCC8 539 aa11.49□□□□□ -0.57
LTN1-206ENST00000486427 ZBBXA8MT70 800 aa11.48□□□□□ -0.57
LTN1-206ENST00000486427 GRM5P41594 1212 aa11.47□□□□□ -0.57
LTN1-206ENST00000486427 MYT1Q01538 1121 aa11.47□□□□□ -0.57
LTN1-206ENST00000486427 FLIIQ13045 1269 aa11.47□□□□□ -0.57
LTN1-206ENST00000486427 IRF5Q13568 498 aa11.47□□□□□ -0.57
LTN1-206ENST00000486427 WASF2Q9Y6W5 498 aa11.47□□□□□ -0.57
LTN1-206ENST00000486427 ADH1CP00326 375 aa11.46□□□□□ -0.57
LTN1-206ENST00000486427 AVPP01185 164 aa11.46□□□□□ -0.57
LTN1-206ENST00000486427 POM121Q96HA1 1249 aa11.46□□□□□ -0.57
LTN1-206ENST00000486427 COG6Q9Y2V7 657 aa11.45□□□□□ -0.58
LTN1-206ENST00000486427 MAP4K5Q9Y4K4 846 aa11.45□□□□□ -0.58
LTN1-206ENST00000486427 NR1H3Q13133 447 aa11.44□□□□□ -0.58
LTN1-206ENST00000486427 TRAF7Q6Q0C0 670 aa11.44□□□□□ -0.58
LTN1-206ENST00000486427 VASH1Q7L8A9 365 aaPredicted RBP11.44□□□□□ -0.58
LTN1-206ENST00000486427 SLC10A4Q96EP9 437 aa11.44□□□□□ -0.58
LTN1-206ENST00000486427 PRM3Q9NNZ6 103 aa11.44□□□□□ -0.58
LTN1-206ENST00000486427 ST8SIA5O15466 376 aa11.43□□□□□ -0.58
LTN1-206ENST00000486427 NR3C2P08235 984 aa11.43□□□□□ -0.58
LTN1-206ENST00000486427 ABL2P42684 1182 aa11.43□□□□□ -0.58
LTN1-206ENST00000486427 NNTQ13423 1086 aa11.43□□□□□ -0.58
LTN1-206ENST00000486427 FSHRP23945 695 aa11.42□□□□□ -0.58
LTN1-206ENST00000486427 DZIP3Q86Y13 1208 aaKnown RBP11.41□□□□□ -0.58
LTN1-206ENST00000486427 AAASQ9NRG9 546 aa11.41□□□□□ -0.58
LTN1-206ENST00000486427 UBTFP17480 764 aaKnown RBP11.4□□□□□ -0.58
LTN1-206ENST00000486427 NR5A1Q13285 461 aa11.4□□□□□ -0.58
LTN1-206ENST00000486427 KCTD15Q96SI1 283 aaPredicted RBP11.4□□□□□ -0.58
LTN1-206ENST00000486427 PCDHB9Q9Y5E1 797 aa11.4□□□□□ -0.58
LTN1-206ENST00000486427 CRIPAKQ8N1N5 446 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms