RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 POLR3AO14802 1390 aaPredicted RBP32.37■■■□□ 2.77
SREBF1-214ENST00000486311 L3MBTL2Q969R5 705 aa32.37■■■□□ 2.77
SREBF1-214ENST00000486311 BTG4Q9NY30 223 aa32.37■■■□□ 2.77
SREBF1-214ENST00000486311 PLEKHG3A1L390 1219 aa32.36■■■□□ 2.77
SREBF1-214ENST00000486311 ITSN1Q15811 1721 aa32.36■■■□□ 2.77
SREBF1-214ENST00000486311 CENPJQ9HC77 1338 aaPredicted RBP32.35■■■□□ 2.77
SREBF1-214ENST00000486311 ACEP12821 1306 aa32.34■■■□□ 2.77
SREBF1-214ENST00000486311 NBPF8Q3BBV2 869 aa32.33■■■□□ 2.77
SREBF1-214ENST00000486311 SIN3AQ96ST3 1273 aa32.31■■■□□ 2.76
SREBF1-214ENST00000486311 COL14A1Q05707 1796 aaKnown RBP32.3■■■□□ 2.76
SREBF1-214ENST00000486311 BRWD3Q6RI45 1802 aa32.3■■■□□ 2.76
SREBF1-214ENST00000486311 TOPAZ1Q8N9V7 1692 aa32.3■■■□□ 2.76
SREBF1-214ENST00000486311 PRDM11Q9NQV5 511 aa32.29■■■□□ 2.76
SREBF1-214ENST00000486311 NRAPQ86VF7 1730 aa32.29■■■□□ 2.76
SREBF1-214ENST00000486311 CRYBG1Q9Y4K1 1723 aa32.29■■■□□ 2.76
SREBF1-214ENST00000486311 SRPK2P78362 688 aaKnown RBP32.28■■■□□ 2.76
SREBF1-214ENST00000486311 BLMP54132 1417 aaPredicted RBP32.27■■■□□ 2.76
SREBF1-214ENST00000486311 KRT27Q7Z3Y8 459 aa32.26■■■□□ 2.75
SREBF1-214ENST00000486311 KIAA0232Q92628 1395 aa32.25■■■□□ 2.75
SREBF1-214ENST00000486311 FAM98CQ17RN3 349 aaKnown RBP32.24■■■□□ 2.75
SREBF1-214ENST00000486311 NUTM2GQ5VZR2 741 aa32.24■■■□□ 2.75
SREBF1-214ENST00000486311 CABP2Q9NPB3 220 aa32.24■■■□□ 2.75
SREBF1-214ENST00000486311 SPATA31A5Q5VU36 1347 aa32.24■■■□□ 2.75
SREBF1-214ENST00000486311 SPATA31A7Q8IWB4 1347 aa32.24■■■□□ 2.75
SREBF1-214ENST00000486311 NEUROD1Q13562 356 aa32.23■■■□□ 2.75
SREBF1-214ENST00000486311 ZRANB1Q9UGI0 708 aa32.23■■■□□ 2.75
SREBF1-214ENST00000486311 PPIP5K1Q6PFW1 1433 aa32.23■■■□□ 2.75
SREBF1-214ENST00000486311 A0A0G2JS52 829 aa32.21■■■□□ 2.75
SREBF1-214ENST00000486311 MYT1Q01538 1121 aa32.21■■■□□ 2.75
SREBF1-214ENST00000486311 ABTB2Q8N961 1025 aa32.2■■■□□ 2.75
SREBF1-214ENST00000486311 CHRNA2Q15822 529 aa32.19■■■□□ 2.74
SREBF1-214ENST00000486311 ZC3H6P61129 1189 aaKnown RBP32.18■■■□□ 2.74
SREBF1-214ENST00000486311 PHRF1Q9P1Y6 1649 aaKnown RBP32.17■■■□□ 2.74
SREBF1-214ENST00000486311 SRCAPQ6ZRS2 3230 aa32.16■■■□□ 2.74
SREBF1-214ENST00000486311 SF3B2Q13435 895 aaKnown RBP32.16■■■□□ 2.74
SREBF1-214ENST00000486311 USP19O94966 1318 aa32.16■■■□□ 2.74
SREBF1-214ENST00000486311 BRD4O60885 1362 aaPredicted RBP32.16■■■□□ 2.74
SREBF1-214ENST00000486311 QRICH2Q9H0J4 1663 aa32.15■■■□□ 2.74
SREBF1-214ENST00000486311 CABP1Q9NZU7 370 aa32.15■■■□□ 2.74
SREBF1-214ENST00000486311 ROCK2O75116 1388 aaKnown RBP32.15■■■□□ 2.74
SREBF1-214ENST00000486311 TRPM1Q7Z4N2 1603 aa32.15■■■□□ 2.74
SREBF1-214ENST00000486311 DEFB132Q7Z7B7 95 aa32.14■■■□□ 2.74
SREBF1-214ENST00000486311 SPATA31A1Q5TZJ5 1347 aa32.13■■■□□ 2.73
SREBF1-214ENST00000486311 EVC2Q86UK5 1308 aa32.13■■■□□ 2.73
SREBF1-214ENST00000486311 CPDO75976 1380 aa32.12■■■□□ 2.73
SREBF1-214ENST00000486311 NLRP13Q86W25 1043 aa32.12■■■□□ 2.73
SREBF1-214ENST00000486311 STRN4Q9NRL3 753 aa32.11■■■□□ 2.73
SREBF1-214ENST00000486311 NRKQ7Z2Y5 1582 aa32.1■■■□□ 2.73
SREBF1-214ENST00000486311 USP6P35125 1406 aa32.09■■■□□ 2.73
SREBF1-214ENST00000486311 GCP02774 474 aa32.08■■■□□ 2.73
SREBF1-214ENST00000486311 THSD7AQ9UPZ6 1657 aa32.07■■■□□ 2.72
SREBF1-214ENST00000486311 SSH2Q76I76 1423 aa32.06■■■□□ 2.72
SREBF1-214ENST00000486311 EVA1CP58658 441 aa32.05■■■□□ 2.72
SREBF1-214ENST00000486311 CAMTA1Q9Y6Y1 1673 aa32.03■■■□□ 2.72
SREBF1-214ENST00000486311 BAG6P46379 1132 aa32.01■■■□□ 2.71
SREBF1-214ENST00000486311 NLRP6P59044 892 aa32.01■■■□□ 2.71
SREBF1-214ENST00000486311 FAM182BQ5T319 152 aa32.01■■■□□ 2.71
SREBF1-214ENST00000486311 LARP1Q6PKG0 1096 aaKnown RBP32■■■□□ 2.71
SREBF1-214ENST00000486311 BARGINQ6ZT62 677 aa32■■■□□ 2.71
SREBF1-214ENST00000486311 LMO7Q8WWI1 1683 aa31.99■■■□□ 2.71
SREBF1-214ENST00000486311 ZNF692Q9BU19 519 aaPredicted RBP31.99■■■□□ 2.71
SREBF1-214ENST00000486311 USP35Q9P2H5 1018 aa31.99■■■□□ 2.71
SREBF1-214ENST00000486311 TCP11L2Q8N4U5 519 aa31.96■■■□□ 2.71
SREBF1-214ENST00000486311 SLIT3O75094 1523 aa31.95■■■□□ 2.71
SREBF1-214ENST00000486311 SBNO2Q9Y2G9 1366 aa31.95■■■□□ 2.71
SREBF1-214ENST00000486311 CARD11Q9BXL7 1154 aa31.94■■■□□ 2.7
SREBF1-214ENST00000486311 TTC21BQ7Z4L5 1316 aa31.94■■■□□ 2.7
SREBF1-214ENST00000486311 AATKQ6ZMQ8 1374 aa31.94■■■□□ 2.7
SREBF1-214ENST00000486311 COL5A2P05997 1499 aaPredicted RBP31.93■■■□□ 2.7
SREBF1-214ENST00000486311 FAM196AQ6ZSG2 479 aa31.93■■■□□ 2.7
SREBF1-214ENST00000486311 THRAP3Q9Y2W1 955 aaKnown RBP31.93■■■□□ 2.7
SREBF1-214ENST00000486311 TONSLQ96HA7 1378 aa31.92■■■□□ 2.7
SREBF1-214ENST00000486311 DISP2A7MBM2 1401 aa31.91■■■□□ 2.7
SREBF1-214ENST00000486311 CPSF1Q10570 1443 aaKnown RBP31.91■■■□□ 2.7
SREBF1-214ENST00000486311 EN1Q05925 392 aaPredicted RBP31.9■■■□□ 2.7
SREBF1-214ENST00000486311 PIK3C2AO00443 1686 aa31.89■■■□□ 2.7
SREBF1-214ENST00000486311 ZBTB7CA1YPR0 619 aa31.89■■■□□ 2.7
SREBF1-214ENST00000486311 PDE3BQ13370 1112 aa31.89■■■□□ 2.7
SREBF1-214ENST00000486311 TTC21AQ8NDW8 1320 aa31.89■■■□□ 2.7
SREBF1-214ENST00000486311 RGPD1P0DJD0 1748 aa31.87■■■□□ 2.69
SREBF1-214ENST00000486311 CRB1P82279 1406 aa31.86■■■□□ 2.69
SREBF1-214ENST00000486311 KTN1Q86UP2 1357 aaKnown RBP31.85■■■□□ 2.69
SREBF1-214ENST00000486311 TRIM37O94972 964 aa31.85■■■□□ 2.69
SREBF1-214ENST00000486311 KCNH5Q8NCM2 988 aa31.85■■■□□ 2.69
SREBF1-214ENST00000486311 ARHGEF25Q86VW2 580 aa31.83■■■□□ 2.69
SREBF1-214ENST00000486311 AKAP12Q02952 1782 aa31.81■■■□□ 2.68
SREBF1-214ENST00000486311 TRIM26Q12899 539 aaPredicted RBP31.81■■■□□ 2.68
SREBF1-214ENST00000486311 AXIN2Q9Y2T1 843 aa31.81■■■□□ 2.68
SREBF1-214ENST00000486311 TNS1Q9HBL0 1735 aaKnown RBP31.8■■■□□ 2.68
SREBF1-214ENST00000486311 PSDA5PKW4 1024 aaPredicted RBP31.78■■■□□ 2.68
SREBF1-214ENST00000486311 EZH2Q15910 746 aaKnown RBP31.78■■■□□ 2.68
SREBF1-214ENST00000486311 TOM1L2Q6ZVM7 507 aa31.78■■■□□ 2.68
SREBF1-214ENST00000486311 CAMKK2Q96RR4 588 aa31.78■■■□□ 2.68
SREBF1-214ENST00000486311 WDR17Q8IZU2 1322 aa31.77■■■□□ 2.68
SREBF1-214ENST00000486311 LRP5O75197 1615 aa31.77■■■□□ 2.68
SREBF1-214ENST00000486311 CD163L1Q9NR16 1453 aa31.77■■■□□ 2.68
SREBF1-214ENST00000486311 COL18A1P39060 1754 aa31.76■■■□□ 2.68
SREBF1-214ENST00000486311 SOX12O15370 315 aa31.76■■■□□ 2.67
SREBF1-214ENST00000486311 APBA3O96018 575 aa31.76■■■□□ 2.67
SREBF1-214ENST00000486311 TMC1Q8TDI8 760 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 243.5 ms