RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 ROBO1Q9Y6N7 1651 aa22.6■■□□□ 1.21
THBS3-207ENST00000486260 NRKQ7Z2Y5 1582 aa22.6■■□□□ 1.21
THBS3-207ENST00000486260 CC2D1BQ5T0F9 858 aaKnown RBP22.59■■□□□ 1.21
THBS3-207ENST00000486260 PAK3O75914 559 aaPredicted RBP22.58■■□□□ 1.2
THBS3-207ENST00000486260 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
THBS3-207ENST00000486260 FYB1O15117 783 aa22.57■■□□□ 1.2
THBS3-207ENST00000486260 NME9Q86XW9 330 aa22.57■■□□□ 1.2
THBS3-207ENST00000486260 GGNBP2Q9H3C7 697 aa22.55■■□□□ 1.2
THBS3-207ENST00000486260 TTC21AQ8NDW8 1320 aa22.55■■□□□ 1.2
THBS3-207ENST00000486260 BRD4O60885 1362 aaPredicted RBP22.55■■□□□ 1.2
THBS3-207ENST00000486260 NPC1L1Q9UHC9 1359 aa22.55■■□□□ 1.2
THBS3-207ENST00000486260 PXDNQ92626 1479 aa22.55■■□□□ 1.2
THBS3-207ENST00000486260 NHSL1Q5SYE7 1610 aa22.54■■□□□ 1.2
THBS3-207ENST00000486260 ANP32CO43423 234 aa22.54■■□□□ 1.2
THBS3-207ENST00000486260 ZRANB1Q9UGI0 708 aa22.54■■□□□ 1.2
THBS3-207ENST00000486260 TRPM3Q9HCF6 1732 aaPredicted RBP22.54■■□□□ 1.2
THBS3-207ENST00000486260 KIF20BQ96Q89 1820 aa22.53■■□□□ 1.2
THBS3-207ENST00000486260 SOS2Q07890 1332 aaPredicted RBP22.53■■□□□ 1.2
THBS3-207ENST00000486260 NSD2O96028 1365 aa22.52■■□□□ 1.2
THBS3-207ENST00000486260 ABTB2Q8N961 1025 aa22.52■■□□□ 1.2
THBS3-207ENST00000486260 PRKRIP1Q9H875 184 aaPredicted RBP22.51■■□□□ 1.19
THBS3-207ENST00000486260 SBNO1A3KN83 1393 aa22.51■■□□□ 1.19
THBS3-207ENST00000486260 NUTM2GQ5VZR2 741 aa22.5■■□□□ 1.19
THBS3-207ENST00000486260 PIK3C2AO00443 1686 aa22.5■■□□□ 1.19
THBS3-207ENST00000486260 LMOD2Q6P5Q4 547 aa22.5■■□□□ 1.19
THBS3-207ENST00000486260 MORC1Q86VD1 984 aa22.49■■□□□ 1.19
THBS3-207ENST00000486260 AHDC1Q5TGY3 1603 aaPredicted RBP22.49■■□□□ 1.19
THBS3-207ENST00000486260 NLRP6P59044 892 aa22.48■■□□□ 1.19
THBS3-207ENST00000486260 COG3Q96JB2 828 aa22.48■■□□□ 1.19
THBS3-207ENST00000486260 PARD3Q8TEW0 1356 aa22.47■■□□□ 1.19
THBS3-207ENST00000486260 SPATA31A3Q5VYP0 1347 aa22.47■■□□□ 1.19
THBS3-207ENST00000486260 RALBP1Q15311 655 aa22.47■■□□□ 1.19
THBS3-207ENST00000486260 TNS3Q68CZ2 1445 aa22.47■■□□□ 1.19
THBS3-207ENST00000486260 MIER1Q8N108 512 aa22.47■■□□□ 1.19
THBS3-207ENST00000486260 ANKRD26Q9UPS8 1709 aa22.47■■□□□ 1.19
THBS3-207ENST00000486260 ALS2Q96Q42 1657 aa22.46■■□□□ 1.19
THBS3-207ENST00000486260 USP31Q70CQ4 1352 aa22.46■■□□□ 1.19
THBS3-207ENST00000486260 OVOS2A0A0J9YW53 1432 aa22.45■■□□□ 1.18
THBS3-207ENST00000486260 OVOS2Q6IE36 1432 aa22.45■■□□□ 1.18
THBS3-207ENST00000486260 TNNT2P45379 298 aaPredicted RBP22.45■■□□□ 1.18
THBS3-207ENST00000486260 PHLPP1O60346 1717 aa22.44■■□□□ 1.18
THBS3-207ENST00000486260 NLRP13Q86W25 1043 aa22.43■■□□□ 1.18
THBS3-207ENST00000486260 PLEKHG5O94827 1062 aa22.43■■□□□ 1.18
THBS3-207ENST00000486260 LRRC59Q96AG4 307 aaKnown RBP22.42■■□□□ 1.18
THBS3-207ENST00000486260 MARF1Q9Y4F3 1742 aaKnown RBP22.42■■□□□ 1.18
THBS3-207ENST00000486260 ARHGEF10O15013 1369 aa22.41■■□□□ 1.18
THBS3-207ENST00000486260 FBLN1P23142 703 aa22.41■■□□□ 1.18
THBS3-207ENST00000486260 COL16A1Q07092 1604 aaPredicted RBP22.4■■□□□ 1.18
THBS3-207ENST00000486260 USP54Q70EL1 1684 aa22.4■■□□□ 1.18
THBS3-207ENST00000486260 SOX12O15370 315 aa22.4■■□□□ 1.18
THBS3-207ENST00000486260 PPP2R1AP30153 589 aa22.39■■□□□ 1.17
THBS3-207ENST00000486260 MYBBP1AQ9BQG0 1328 aaKnown RBP22.39■■□□□ 1.17
THBS3-207ENST00000486260 CABLES1Q8TDN4 633 aa22.37■■□□□ 1.17
THBS3-207ENST00000486260 USP19O94966 1318 aa22.37■■□□□ 1.17
THBS3-207ENST00000486260 MED1Q15648 1581 aaPredicted RBP22.36■■□□□ 1.17
THBS3-207ENST00000486260 SLIT3O75094 1523 aa22.34■■□□□ 1.17
THBS3-207ENST00000486260 GCP02774 474 aa22.34■■□□□ 1.17
THBS3-207ENST00000486260 AATKQ6ZMQ8 1374 aa22.33■■□□□ 1.17
THBS3-207ENST00000486260 HSPA1LP34931 641 aa22.33■■□□□ 1.17
THBS3-207ENST00000486260 RRS1Q15050 365 aaKnown RBP22.33■■□□□ 1.17
THBS3-207ENST00000486260 KCNH5Q8NCM2 988 aa22.33■■□□□ 1.17
THBS3-207ENST00000486260 PNPLA6Q8IY17 1366 aa22.33■■□□□ 1.16
THBS3-207ENST00000486260 MTHFSP49914 203 aa22.32■■□□□ 1.16
THBS3-207ENST00000486260 POLKQ9UBT6 870 aa22.32■■□□□ 1.16
THBS3-207ENST00000486260 MAP2P11137 1827 aaKnown RBP22.31■■□□□ 1.16
THBS3-207ENST00000486260 CCDC184Q52MB2 194 aa22.31■■□□□ 1.16
THBS3-207ENST00000486260 NFAT5O94916 1531 aa22.31■■□□□ 1.16
THBS3-207ENST00000486260 CRYBG1Q9Y4K1 1723 aa22.31■■□□□ 1.16
THBS3-207ENST00000486260 PHRF1Q9P1Y6 1649 aaKnown RBP22.31■■□□□ 1.16
THBS3-207ENST00000486260 EMILIN1Q9Y6C2 1016 aa22.3■■□□□ 1.16
THBS3-207ENST00000486260 PPM1GO15355 546 aaPredicted RBP22.3■■□□□ 1.16
THBS3-207ENST00000486260 COL22A1Q8NFW1 1626 aaPredicted RBP22.28■■□□□ 1.16
THBS3-207ENST00000486260 MAP3K19Q56UN5 1328 aa22.28■■□□□ 1.16
THBS3-207ENST00000486260 CCER2I3L3R5 266 aa22.28■■□□□ 1.16
THBS3-207ENST00000486260 HAP1P54257 671 aaPredicted RBP22.27■■□□□ 1.16
THBS3-207ENST00000486260 ZC3H6P61129 1189 aaKnown RBP22.27■■□□□ 1.16
THBS3-207ENST00000486260 ABCA3Q99758 1704 aa22.26■■□□□ 1.15
THBS3-207ENST00000486260 ZBTB7CA1YPR0 619 aa22.26■■□□□ 1.15
THBS3-207ENST00000486260 MRS2Q9HD23 443 aa22.26■■□□□ 1.15
THBS3-207ENST00000486260 JCADQ9P266 1359 aa22.26■■□□□ 1.15
THBS3-207ENST00000486260 ARHGEF25Q86VW2 580 aa22.25■■□□□ 1.15
THBS3-207ENST00000486260 SMG6Q86US8 1419 aaKnown RBP22.25■■□□□ 1.15
THBS3-207ENST00000486260 SHPRHQ149N8 1683 aa22.24■■□□□ 1.15
THBS3-207ENST00000486260 AMPHP49418 695 aa22.24■■□□□ 1.15
THBS3-207ENST00000486260 FBXO41Q8TF61 875 aa22.24■■□□□ 1.15
THBS3-207ENST00000486260 LTN1O94822 1766 aa22.24■■□□□ 1.15
THBS3-207ENST00000486260 PEAK1Q9H792 1746 aa22.24■■□□□ 1.15
THBS3-207ENST00000486260 KIAA0232Q92628 1395 aa22.22■■□□□ 1.15
THBS3-207ENST00000486260 CFAP53Q96M91 514 aa22.21■■□□□ 1.15
THBS3-207ENST00000486260 CPDO75976 1380 aa22.21■■□□□ 1.15
THBS3-207ENST00000486260 CDK12Q9NYV4 1490 aaPredicted RBP22.2■■□□□ 1.15
THBS3-207ENST00000486260 NUTM2BA6NNL0 878 aaPredicted RBP22.2■■□□□ 1.14
THBS3-207ENST00000486260 NUTM2EB1AL46 878 aaPredicted RBP22.2■■□□□ 1.14
THBS3-207ENST00000486260 HOXC9P31274 260 aa22.2■■□□□ 1.14
THBS3-207ENST00000486260 HSP90AB2PQ58FF8 381 aa22.2■■□□□ 1.14
THBS3-207ENST00000486260 NUTM2AQ8IVF1 878 aaPredicted RBP22.2■■□□□ 1.14
THBS3-207ENST00000486260 FLT4P35916 1363 aa22.2■■□□□ 1.14
THBS3-207ENST00000486260 CHRNA2Q15822 529 aa22.2■■□□□ 1.14
THBS3-207ENST00000486260 IP6K1Q92551 441 aa22.19■■□□□ 1.14
THBS3-207ENST00000486260 INSRP06213 1382 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms