RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 MNX1P50219 401 aaPredicted RBP12.92□□□□□ -0.34
XRN1-212ENST00000486211 CAMKK2Q96RR4 588 aa12.92□□□□□ -0.34
XRN1-212ENST00000486211 NRAPQ86VF7 1730 aa12.91□□□□□ -0.34
XRN1-212ENST00000486211 FAM182BQ5T319 152 aa12.91□□□□□ -0.34
XRN1-212ENST00000486211 PROM2Q8N271 834 aa12.91□□□□□ -0.34
XRN1-212ENST00000486211 CCDC9Q9Y3X0 531 aaKnown RBP12.91□□□□□ -0.34
XRN1-212ENST00000486211 ABCA3Q99758 1704 aa12.91□□□□□ -0.34
XRN1-212ENST00000486211 CAMTA1Q9Y6Y1 1673 aa12.9□□□□□ -0.34
XRN1-212ENST00000486211 SENP3-EIF4A1A0A087X0R7 540 aa12.9□□□□□ -0.34
XRN1-212ENST00000486211 FAM98CQ17RN3 349 aaKnown RBP12.9□□□□□ -0.34
XRN1-212ENST00000486211 ZNF784Q8NCA9 323 aaPredicted RBP12.9□□□□□ -0.34
XRN1-212ENST00000486211 NINLQ9Y2I6 1382 aa12.9□□□□□ -0.34
XRN1-212ENST00000486211 ADGRB2O60241 1585 aa12.89□□□□□ -0.35
XRN1-212ENST00000486211 RREB1Q92766 1687 aa12.89□□□□□ -0.35
XRN1-212ENST00000486211 CCDC144AA2RUR9 1427 aa12.88□□□□□ -0.35
XRN1-212ENST00000486211 NAIPQ13075 1403 aa12.88□□□□□ -0.35
XRN1-212ENST00000486211 CLTCL1P53675 1640 aa12.88□□□□□ -0.35
XRN1-212ENST00000486211 A0A0G2JS52 829 aa12.88□□□□□ -0.35
XRN1-212ENST00000486211 MYT1Q01538 1121 aa12.88□□□□□ -0.35
XRN1-212ENST00000486211 CABLES1Q8TDN4 633 aa12.88□□□□□ -0.35
XRN1-212ENST00000486211 NUP155O75694 1391 aa12.88□□□□□ -0.35
XRN1-212ENST00000486211 THSD7AQ9UPZ6 1657 aa12.88□□□□□ -0.35
XRN1-212ENST00000486211 TNS3Q68CZ2 1445 aa12.88□□□□□ -0.35
XRN1-212ENST00000486211 KIF1AQ12756 1690 aa12.87□□□□□ -0.35
XRN1-212ENST00000486211 PARD3Q8TEW0 1356 aa12.87□□□□□ -0.35
XRN1-212ENST00000486211 FAM83GA6ND36 823 aa12.87□□□□□ -0.35
XRN1-212ENST00000486211 GALR2O43603 387 aaPredicted RBP12.87□□□□□ -0.35
XRN1-212ENST00000486211 NUP188Q5SRE5 1749 aa12.87□□□□□ -0.35
XRN1-212ENST00000486211 NUTM2FA1L443 756 aa12.85□□□□□ -0.35
XRN1-212ENST00000486211 C1QTNF8P60827 252 aa12.85□□□□□ -0.35
XRN1-212ENST00000486211 KRT28Q7Z3Y7 464 aa12.85□□□□□ -0.35
XRN1-212ENST00000486211 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
XRN1-212ENST00000486211 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
XRN1-212ENST00000486211 SPON1Q9HCB6 807 aa12.84□□□□□ -0.35
XRN1-212ENST00000486211 FMN2Q9NZ56 1722 aa12.84□□□□□ -0.35
XRN1-212ENST00000486211 KCNQ2O43526 872 aa12.83□□□□□ -0.36
XRN1-212ENST00000486211 FAM50AQ14320 339 aaKnown RBP12.83□□□□□ -0.36
XRN1-212ENST00000486211 PPP1R1BQ9UD71 204 aaPredicted RBP12.83□□□□□ -0.36
XRN1-212ENST00000486211 ROCK1Q13464 1354 aa12.82□□□□□ -0.36
XRN1-212ENST00000486211 TRIM37O94972 964 aa12.82□□□□□ -0.36
XRN1-212ENST00000486211 SPATA31A5Q5VU36 1347 aa12.82□□□□□ -0.36
XRN1-212ENST00000486211 SPATA31A7Q8IWB4 1347 aa12.82□□□□□ -0.36
XRN1-212ENST00000486211 SBNO1A3KN83 1393 aa12.81□□□□□ -0.36
XRN1-212ENST00000486211 TECPR2O15040 1411 aa12.81□□□□□ -0.36
XRN1-212ENST00000486211 VGFO15240 615 aaPredicted RBP12.81□□□□□ -0.36
XRN1-212ENST00000486211 BTG4Q9NY30 223 aa12.81□□□□□ -0.36
XRN1-212ENST00000486211 KIF1BO60333 1816 aa12.81□□□□□ -0.36
XRN1-212ENST00000486211 PLEKHG5O94827 1062 aa12.8□□□□□ -0.36
XRN1-212ENST00000486211 APBA3O96018 575 aa12.8□□□□□ -0.36
XRN1-212ENST00000486211 WAPLQ7Z5K2 1190 aa12.8□□□□□ -0.36
XRN1-212ENST00000486211 ARHGEF10O15013 1369 aa12.8□□□□□ -0.36
XRN1-212ENST00000486211 COL14A1Q05707 1796 aaKnown RBP12.79□□□□□ -0.36
XRN1-212ENST00000486211 FAM196AQ6ZSG2 479 aa12.79□□□□□ -0.36
XRN1-212ENST00000486211 PLEKHH1Q9ULM0 1364 aa12.79□□□□□ -0.36
XRN1-212ENST00000486211 NBPF8Q3BBV2 869 aa12.78□□□□□ -0.36
XRN1-212ENST00000486211 NBPF14Q5TI25 921 aa12.78□□□□□ -0.36
XRN1-212ENST00000486211 RRBP1Q9P2E9 1410 aaKnown RBP12.78□□□□□ -0.36
XRN1-212ENST00000486211 NRXN1Q9ULB1 1477 aa12.78□□□□□ -0.36
XRN1-212ENST00000486211 NRKQ7Z2Y5 1582 aa12.77□□□□□ -0.36
XRN1-212ENST00000486211 PSME1Q06323 249 aa12.77□□□□□ -0.37
XRN1-212ENST00000486211 UTRNP46939 3433 aa12.76□□□□□ -0.37
XRN1-212ENST00000486211 RGPD8O14715 1765 aaPredicted RBP12.76□□□□□ -0.37
XRN1-212ENST00000486211 PPLO60437 1756 aa12.76□□□□□ -0.37
XRN1-212ENST00000486211 CASZ1Q86V15 1759 aa12.76□□□□□ -0.37
XRN1-212ENST00000486211 PHF8Q9UPP1 1060 aa12.76□□□□□ -0.37
XRN1-212ENST00000486211 RPGRIP1LQ68CZ1 1315 aa12.75□□□□□ -0.37
XRN1-212ENST00000486211 KNDC1Q76NI1 1749 aa12.75□□□□□ -0.37
XRN1-212ENST00000486211 TRPM3Q9HCF6 1732 aaPredicted RBP12.74□□□□□ -0.37
XRN1-212ENST00000486211 IFT172Q9UG01 1749 aa12.74□□□□□ -0.37
XRN1-212ENST00000486211 MYOM1P52179 1685 aa12.74□□□□□ -0.37
XRN1-212ENST00000486211 ABCC11Q96J66 1382 aa12.74□□□□□ -0.37
XRN1-212ENST00000486211 SPATA31A1Q5TZJ5 1347 aa12.74□□□□□ -0.37
XRN1-212ENST00000486211 FKBP8Q14318 412 aa12.74□□□□□ -0.37
XRN1-212ENST00000486211 LMOD2Q6P5Q4 547 aa12.74□□□□□ -0.37
XRN1-212ENST00000486211 MIER1Q8N108 512 aa12.74□□□□□ -0.37
XRN1-212ENST00000486211 CHD4Q14839 1912 aa12.73□□□□□ -0.37
XRN1-212ENST00000486211 TSPYL2Q9H2G4 693 aaPredicted RBP12.73□□□□□ -0.37
XRN1-212ENST00000486211 STK26Q9P289 416 aa12.73□□□□□ -0.37
XRN1-212ENST00000486211 CRYBG1Q9Y4K1 1723 aa12.73□□□□□ -0.37
XRN1-212ENST00000486211 ALS2Q96Q42 1657 aa12.73□□□□□ -0.37
XRN1-212ENST00000486211 PTGER2P43116 358 aa12.71□□□□□ -0.37
XRN1-212ENST00000486211 PDGFDQ9GZP0 370 aaPredicted RBP12.71□□□□□ -0.37
XRN1-212ENST00000486211 CEP350Q5VT06 3117 aa12.71□□□□□ -0.38
XRN1-212ENST00000486211 LOC105371045A0A1W2PR82 267 aa12.7□□□□□ -0.38
XRN1-212ENST00000486211 ANO8Q9HCE9 1232 aaPredicted RBP12.7□□□□□ -0.38
XRN1-212ENST00000486211 ADGRF5Q8IZF2 1346 aa12.69□□□□□ -0.38
XRN1-212ENST00000486211 RGPD3A6NKT7 1758 aaPredicted RBP12.69□□□□□ -0.38
XRN1-212ENST00000486211 RGPD4Q7Z3J3 1758 aa12.69□□□□□ -0.38
XRN1-212ENST00000486211 SYT17Q9BSW7 474 aa12.68□□□□□ -0.38
XRN1-212ENST00000486211 TMEM132EQ6IEE7 984 aa12.67□□□□□ -0.38
XRN1-212ENST00000486211 MS4A3Q96HJ5 214 aa12.67□□□□□ -0.38
XRN1-212ENST00000486211 FHDC1Q9C0D6 1143 aaPredicted RBP12.67□□□□□ -0.38
XRN1-212ENST00000486211 YTHDC2Q9H6S0 1430 aaKnown RBP12.66□□□□□ -0.38
XRN1-212ENST00000486211 GIGYF1O75420 1035 aaPredicted RBP12.66□□□□□ -0.38
XRN1-212ENST00000486211 ZBTB7AO95365 584 aa12.66□□□□□ -0.38
XRN1-212ENST00000486211 BARGINQ6ZT62 677 aa12.66□□□□□ -0.38
XRN1-212ENST00000486211 PMFBP1Q8TBY8 1022 aa12.66□□□□□ -0.38
XRN1-212ENST00000486211 PRDM11Q9NQV5 511 aa12.66□□□□□ -0.38
XRN1-212ENST00000486211 PDE3BQ13370 1112 aa12.65□□□□□ -0.38
XRN1-212ENST00000486211 SIRT1Q96EB6 747 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms