RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 ACEP12821 1306 aa31.42■■■□□ 2.62
HLA-F-228ENST00000486194 QRICH2Q9H0J4 1663 aa31.41■■■□□ 2.62
HLA-F-228ENST00000486194 TONSLQ96HA7 1378 aa31.4■■■□□ 2.62
HLA-F-228ENST00000486194 NBPF8Q3BBV2 869 aa31.39■■■□□ 2.62
HLA-F-228ENST00000486194 EVC2Q86UK5 1308 aa31.37■■■□□ 2.61
HLA-F-228ENST00000486194 ATAD2Q6PL18 1390 aa31.37■■■□□ 2.61
HLA-F-228ENST00000486194 NWD2Q9ULI1 1742 aa31.36■■■□□ 2.61
HLA-F-228ENST00000486194 PPIP5K1Q6PFW1 1433 aa31.36■■■□□ 2.61
HLA-F-228ENST00000486194 FAM83GA6ND36 823 aa31.36■■■□□ 2.61
HLA-F-228ENST00000486194 CABP2Q9NPB3 220 aa31.36■■■□□ 2.61
HLA-F-228ENST00000486194 VPS72Q15906 364 aa31.35■■■□□ 2.61
HLA-F-228ENST00000486194 RALGAPBQ86X10 1494 aa31.34■■■□□ 2.61
HLA-F-228ENST00000486194 PLCH1Q4KWH8 1693 aa31.34■■■□□ 2.61
HLA-F-228ENST00000486194 BRD4O60885 1362 aaPredicted RBP31.31■■■□□ 2.6
HLA-F-228ENST00000486194 CCDC9Q9Y3X0 531 aaKnown RBP31.3■■■□□ 2.6
HLA-F-228ENST00000486194 COL14A1Q05707 1796 aaKnown RBP31.29■■■□□ 2.6
HLA-F-228ENST00000486194 GLI3P10071 1580 aa31.29■■■□□ 2.6
HLA-F-228ENST00000486194 PRDM11Q9NQV5 511 aa31.28■■■□□ 2.6
HLA-F-228ENST00000486194 BTG4Q9NY30 223 aa31.28■■■□□ 2.6
HLA-F-228ENST00000486194 CRYBG1Q9Y4K1 1723 aa31.27■■■□□ 2.6
HLA-F-228ENST00000486194 ABTB2Q8N961 1025 aa31.27■■■□□ 2.6
HLA-F-228ENST00000486194 CARD11Q9BXL7 1154 aa31.27■■■□□ 2.6
HLA-F-228ENST00000486194 CABP1Q9NZU7 370 aa31.27■■■□□ 2.6
HLA-F-228ENST00000486194 NUTM2GQ5VZR2 741 aa31.24■■■□□ 2.59
HLA-F-228ENST00000486194 SBNO2Q9Y2G9 1366 aa31.22■■■□□ 2.59
HLA-F-228ENST00000486194 NLRP13Q86W25 1043 aa31.22■■■□□ 2.59
HLA-F-228ENST00000486194 PHRF1Q9P1Y6 1649 aaKnown RBP31.2■■■□□ 2.59
HLA-F-228ENST00000486194 KIAA0232Q92628 1395 aa31.2■■■□□ 2.59
HLA-F-228ENST00000486194 ONECUT3O60422 494 aaPredicted RBP31.2■■■□□ 2.59
HLA-F-228ENST00000486194 SEPT12Q8IYM1 358 aa31.2■■■□□ 2.59
HLA-F-228ENST00000486194 USP6P35125 1406 aa31.2■■■□□ 2.59
HLA-F-228ENST00000486194 NRAPQ86VF7 1730 aa31.2■■■□□ 2.58
HLA-F-228ENST00000486194 CCDC125Q86Z20 511 aa31.18■■■□□ 2.58
HLA-F-228ENST00000486194 ZNF692Q9BU19 519 aaPredicted RBP31.18■■■□□ 2.58
HLA-F-228ENST00000486194 USP19O94966 1318 aa31.18■■■□□ 2.58
HLA-F-228ENST00000486194 ZC3H6P61129 1189 aaKnown RBP31.17■■■□□ 2.58
HLA-F-228ENST00000486194 A0A0G2JS52 829 aa31.13■■■□□ 2.57
HLA-F-228ENST00000486194 MYT1Q01538 1121 aa31.13■■■□□ 2.57
HLA-F-228ENST00000486194 CHRNA2Q15822 529 aa31.13■■■□□ 2.57
HLA-F-228ENST00000486194 SPATA31A5Q5VU36 1347 aa31.13■■■□□ 2.57
HLA-F-228ENST00000486194 SPATA31A7Q8IWB4 1347 aa31.13■■■□□ 2.57
HLA-F-228ENST00000486194 CPDO75976 1380 aa31.13■■■□□ 2.57
HLA-F-228ENST00000486194 GCP02774 474 aa31.12■■■□□ 2.57
HLA-F-228ENST00000486194 NRKQ7Z2Y5 1582 aa31.12■■■□□ 2.57
HLA-F-228ENST00000486194 NLRP6P59044 892 aa31.11■■■□□ 2.57
HLA-F-228ENST00000486194 FAM98CQ17RN3 349 aaKnown RBP31.11■■■□□ 2.57
HLA-F-228ENST00000486194 SSH2Q76I76 1423 aa31.1■■■□□ 2.57
HLA-F-228ENST00000486194 KRT27Q7Z3Y8 459 aa31.1■■■□□ 2.57
HLA-F-228ENST00000486194 EVA1CP58658 441 aa31.07■■■□□ 2.56
HLA-F-228ENST00000486194 STRN4Q9NRL3 753 aa31.07■■■□□ 2.56
HLA-F-228ENST00000486194 TTC21AQ8NDW8 1320 aa31.06■■■□□ 2.56
HLA-F-228ENST00000486194 SLC24A1O60721 1099 aa31.06■■■□□ 2.56
HLA-F-228ENST00000486194 CPSF1Q10570 1443 aaKnown RBP31.06■■■□□ 2.56
HLA-F-228ENST00000486194 BRWD3Q6RI45 1802 aa31.05■■■□□ 2.56
HLA-F-228ENST00000486194 TTC21BQ7Z4L5 1316 aa31.05■■■□□ 2.56
HLA-F-228ENST00000486194 SPATA31A1Q5TZJ5 1347 aa31.04■■■□□ 2.56
HLA-F-228ENST00000486194 BLMP54132 1417 aaPredicted RBP31.04■■■□□ 2.56
HLA-F-228ENST00000486194 KTN1Q86UP2 1357 aaKnown RBP31.04■■■□□ 2.56
HLA-F-228ENST00000486194 PUS7Q96PZ0 661 aaKnown RBP31.03■■■□□ 2.56
HLA-F-228ENST00000486194 AKAP12Q02952 1782 aa31.02■■■□□ 2.56
HLA-F-228ENST00000486194 CLSPNQ9HAW4 1339 aa31.02■■■□□ 2.56
HLA-F-228ENST00000486194 SLIT3O75094 1523 aa31.02■■■□□ 2.56
HLA-F-228ENST00000486194 SF3B2Q13435 895 aaKnown RBP31.01■■■□□ 2.55
HLA-F-228ENST00000486194 TIMELESSQ9UNS1 1208 aa31■■■□□ 2.55
HLA-F-228ENST00000486194 PIK3C2AO00443 1686 aa31■■■□□ 2.55
HLA-F-228ENST00000486194 KCNH5Q8NCM2 988 aa30.99■■■□□ 2.55
HLA-F-228ENST00000486194 LMO7Q8WWI1 1683 aa30.99■■■□□ 2.55
HLA-F-228ENST00000486194 CAMTA1Q9Y6Y1 1673 aa30.99■■■□□ 2.55
HLA-F-228ENST00000486194 TMC1Q8TDI8 760 aa30.98■■■□□ 2.55
HLA-F-228ENST00000486194 HDGFL2Q7Z4V5 671 aaPredicted RBP30.97■■■□□ 2.55
HLA-F-228ENST00000486194 AATKQ6ZMQ8 1374 aa30.96■■■□□ 2.55
HLA-F-228ENST00000486194 ST20-MTHFSA0A0A6YYL1 179 aa30.96■■■□□ 2.55
HLA-F-228ENST00000486194 PCGF6Q9BYE7 350 aa30.96■■■□□ 2.55
HLA-F-228ENST00000486194 THSD7AQ9UPZ6 1657 aa30.96■■■□□ 2.55
HLA-F-228ENST00000486194 ZBTB7CA1YPR0 619 aa30.95■■■□□ 2.55
HLA-F-228ENST00000486194 BARGINQ6ZT62 677 aa30.95■■■□□ 2.55
HLA-F-228ENST00000486194 LARP1Q6PKG0 1096 aaKnown RBP30.94■■■□□ 2.54
HLA-F-228ENST00000486194 TERF2IPQ9NYB0 399 aa30.94■■■□□ 2.54
HLA-F-228ENST00000486194 USP35Q9P2H5 1018 aa30.94■■■□□ 2.54
HLA-F-228ENST00000486194 EP400Q96L91 3159 aa30.93■■■□□ 2.54
HLA-F-228ENST00000486194 TESK2Q96S53 571 aa30.93■■■□□ 2.54
HLA-F-228ENST00000486194 THRAP3Q9Y2W1 955 aaKnown RBP30.93■■■□□ 2.54
HLA-F-228ENST00000486194 COL5A2P05997 1499 aaPredicted RBP30.93■■■□□ 2.54
HLA-F-228ENST00000486194 MON2Q7Z3U7 1717 aa30.93■■■□□ 2.54
HLA-F-228ENST00000486194 TCP11L2Q8N4U5 519 aa30.92■■■□□ 2.54
HLA-F-228ENST00000486194 NINLQ9Y2I6 1382 aa30.92■■■□□ 2.54
HLA-F-228ENST00000486194 SLC12A5Q9H2X9 1139 aa30.91■■■□□ 2.54
HLA-F-228ENST00000486194 CD163L1Q9NR16 1453 aa30.9■■■□□ 2.54
HLA-F-228ENST00000486194 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.89■■■□□ 2.54
HLA-F-228ENST00000486194 ARHGEF25Q86VW2 580 aa30.88■■■□□ 2.53
HLA-F-228ENST00000486194 ZRANB1Q9UGI0 708 aa30.88■■■□□ 2.53
HLA-F-228ENST00000486194 USP31Q70CQ4 1352 aa30.88■■■□□ 2.53
HLA-F-228ENST00000486194 CRB1P82279 1406 aa30.88■■■□□ 2.53
HLA-F-228ENST00000486194 EDC4Q6P2E9 1401 aaKnown RBP30.88■■■□□ 2.53
HLA-F-228ENST00000486194 USP47Q96K76 1375 aa30.87■■■□□ 2.53
HLA-F-228ENST00000486194 SOX12O15370 315 aa30.85■■■□□ 2.53
HLA-F-228ENST00000486194 A0A1W2PP64 1363 aa30.84■■■□□ 2.53
HLA-F-228ENST00000486194 BAG6P46379 1132 aa30.84■■■□□ 2.53
HLA-F-228ENST00000486194 TMF1P82094 1093 aa30.84■■■□□ 2.53
HLA-F-228ENST00000486194 PDE3BQ13370 1112 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms