RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 MAGEC2Q9UBF1 373 aaPredicted RBP12.66□□□□□ -0.38
SRGAP3-207ENST00000485983 KDM4AO75164 1064 aa12.65□□□□□ -0.38
SRGAP3-207ENST00000485983 TEX35Q5T0J7 233 aa12.65□□□□□ -0.38
SRGAP3-207ENST00000485983 ANKLE2Q86XL3 938 aa12.65□□□□□ -0.38
SRGAP3-207ENST00000485983 MNS1Q8NEH6 495 aa12.65□□□□□ -0.38
SRGAP3-207ENST00000485983 PNISRQ8TF01 805 aaKnown RBP12.65□□□□□ -0.38
SRGAP3-207ENST00000485983 PRDM11Q9NQV5 511 aa12.65□□□□□ -0.38
SRGAP3-207ENST00000485983 MPHOSPH10O00566 681 aaKnown RBP12.65□□□□□ -0.38
SRGAP3-207ENST00000485983 CDC45O75419 566 aa12.64□□□□□ -0.39
SRGAP3-207ENST00000485983 ZSCAN29Q8IWY8 852 aaPredicted RBP12.64□□□□□ -0.39
SRGAP3-207ENST00000485983 PDILTQ8N807 584 aa12.64□□□□□ -0.39
SRGAP3-207ENST00000485983 NESP48681 1621 aa12.64□□□□□ -0.39
SRGAP3-207ENST00000485983 PIP4K2AP48426 406 aaPredicted RBP12.64□□□□□ -0.39
SRGAP3-207ENST00000485983 FILIP1LQ4L180 1135 aa12.64□□□□□ -0.39
SRGAP3-207ENST00000485983 SOGA3Q5TF21 947 aa12.64□□□□□ -0.39
SRGAP3-207ENST00000485983 ZBED9Q6R2W3 1325 aa12.63□□□□□ -0.39
SRGAP3-207ENST00000485983 TMOD2Q9NZR1 351 aa12.63□□□□□ -0.39
SRGAP3-207ENST00000485983 CAGE1Q8TC20 777 aa12.63□□□□□ -0.39
SRGAP3-207ENST00000485983 ARGLU1Q9NWB6 273 aaPredicted RBP12.63□□□□□ -0.39
SRGAP3-207ENST00000485983 ZNF692Q9BU19 519 aaPredicted RBP12.63□□□□□ -0.39
SRGAP3-207ENST00000485983 MTHFSP49914 203 aa12.62□□□□□ -0.39
SRGAP3-207ENST00000485983 PDCP20941 246 aa12.62□□□□□ -0.39
SRGAP3-207ENST00000485983 ZSCAN25Q6NSZ9 544 aa12.62□□□□□ -0.39
SRGAP3-207ENST00000485983 TRIM22Q8IYM9 498 aa12.62□□□□□ -0.39
SRGAP3-207ENST00000485983 AQRO60306 1485 aaKnown RBP eCLIP12.62□□□□□ -0.39
SRGAP3-207ENST00000485983 CCDC57Q2TAC2 916 aa12.62□□□□□ -0.39
SRGAP3-207ENST00000485983 HSP90B2PQ58FF3 399 aa12.62□□□□□ -0.39
SRGAP3-207ENST00000485983 HDGFL1Q5TGJ6 251 aa12.62□□□□□ -0.39
SRGAP3-207ENST00000485983 ZNF530Q6P9A1 599 aaPredicted RBP12.62□□□□□ -0.39
SRGAP3-207ENST00000485983 SMARCE1Q969G3 411 aa12.61□□□□□ -0.39
SRGAP3-207ENST00000485983 TSHZ2Q9NRE2 1034 aa12.61□□□□□ -0.39
SRGAP3-207ENST00000485983 IFT57Q9NWB7 429 aa12.61□□□□□ -0.39
SRGAP3-207ENST00000485983 KINO60870 393 aaKnown RBP12.61□□□□□ -0.39
SRGAP3-207ENST00000485983 FGD5Q6ZNL6 1462 aa12.6□□□□□ -0.39
SRGAP3-207ENST00000485983 PRKAR2BP31323 418 aa12.6□□□□□ -0.39
SRGAP3-207ENST00000485983 DCTN1Q14203 1278 aa12.6□□□□□ -0.39
SRGAP3-207ENST00000485983 JMYQ8N9B5 988 aa12.6□□□□□ -0.39
SRGAP3-207ENST00000485983 ZNF396Q96N95 335 aaPredicted RBP12.6□□□□□ -0.39
SRGAP3-207ENST00000485983 ZHX3Q9H4I2 956 aa12.6□□□□□ -0.39
SRGAP3-207ENST00000485983 GNAI2P04899 355 aa12.6□□□□□ -0.39
SRGAP3-207ENST00000485983 PRAM1Q96QH2 718 aa12.6□□□□□ -0.39
SRGAP3-207ENST00000485983 GAPVD1Q14C86 1478 aa12.59□□□□□ -0.39
SRGAP3-207ENST00000485983 C22orf23Q9BZE7 217 aa12.59□□□□□ -0.39
SRGAP3-207ENST00000485983 DESP17661 470 aa12.58□□□□□ -0.39
SRGAP3-207ENST00000485983 STK38Q15208 465 aa12.58□□□□□ -0.39
SRGAP3-207ENST00000485983 AFAP1Q8N556 730 aa12.58□□□□□ -0.39
SRGAP3-207ENST00000485983 CCDC69A6NI79 296 aa12.58□□□□□ -0.4
SRGAP3-207ENST00000485983 STIM1Q13586 685 aa12.58□□□□□ -0.4
SRGAP3-207ENST00000485983 TWISTNBQ3B726 338 aaPredicted RBP12.58□□□□□ -0.4
SRGAP3-207ENST00000485983 ERCC4Q92889 916 aaPredicted RBP12.58□□□□□ -0.4
SRGAP3-207ENST00000485983 LUC7LQ9NQ29 371 aaKnown RBP12.58□□□□□ -0.4
SRGAP3-207ENST00000485983 FYCO1Q9BQS8 1478 aa12.58□□□□□ -0.4
SRGAP3-207ENST00000485983 ZRSR2Q15696 482 aaKnown RBP12.58□□□□□ -0.4
SRGAP3-207ENST00000485983 ZNHIT6Q9NWK9 470 aaKnown RBP12.58□□□□□ -0.4
SRGAP3-207ENST00000485983 RRBP1Q9P2E9 1410 aaKnown RBP12.58□□□□□ -0.4
SRGAP3-207ENST00000485983 TRIM21P19474 475 aaKnown RBP12.57□□□□□ -0.4
SRGAP3-207ENST00000485983 BMP2KQ9NSY1 1161 aaPredicted RBP12.57□□□□□ -0.4
SRGAP3-207ENST00000485983 POGZQ7Z3K3 1410 aa12.57□□□□□ -0.4
SRGAP3-207ENST00000485983 TTLL5Q6EMB2 1281 aa12.57□□□□□ -0.4
SRGAP3-207ENST00000485983 ZNF771Q7L3S4 317 aaPredicted RBP12.57□□□□□ -0.4
SRGAP3-207ENST00000485983 NEFHP12036 1026 aa12.57□□□□□ -0.4
SRGAP3-207ENST00000485983 MCM2P49736 904 aa12.57□□□□□ -0.4
SRGAP3-207ENST00000485983 ZNF76P36508 570 aa12.57□□□□□ -0.4
SRGAP3-207ENST00000485983 CFAP70Q5T0N1 1121 aa12.57□□□□□ -0.4
SRGAP3-207ENST00000485983 IGHMBP2P38935 993 aaKnown RBP12.56□□□□□ -0.4
SRGAP3-207ENST00000485983 SULT6B1Q6IMI4 303 aa12.56□□□□□ -0.4
SRGAP3-207ENST00000485983 TCP11L2Q8N4U5 519 aa12.56□□□□□ -0.4
SRGAP3-207ENST00000485983 BRPF1P55201 1214 aaPredicted RBP12.56□□□□□ -0.4
SRGAP3-207ENST00000485983 BICDL1Q6ZP65 573 aa12.56□□□□□ -0.4
SRGAP3-207ENST00000485983 SRCIN1Q9C0H9 1055 aa12.56□□□□□ -0.4
SRGAP3-207ENST00000485983 KIF7Q2M1P5 1343 aa12.56□□□□□ -0.4
SRGAP3-207ENST00000485983 NEBLO76041 1014 aa12.56□□□□□ -0.4
SRGAP3-207ENST00000485983 GSE1Q14687 1217 aa12.56□□□□□ -0.4
SRGAP3-207ENST00000485983 PANK1Q8TE04 598 aa12.56□□□□□ -0.4
SRGAP3-207ENST00000485983 CEP126Q9P2H0 1117 aa12.56□□□□□ -0.4
SRGAP3-207ENST00000485983 NOL7Q9UMY1 257 aaKnown RBP12.56□□□□□ -0.4
SRGAP3-207ENST00000485983 LETM1O95202 739 aaPredicted RBP12.56□□□□□ -0.4
SRGAP3-207ENST00000485983 SLC4A2P04920 1241 aa12.56□□□□□ -0.4
SRGAP3-207ENST00000485983 MYL6BP14649 208 aa12.56□□□□□ -0.4
SRGAP3-207ENST00000485983 STK11IPQ8N1F8 1099 aa12.56□□□□□ -0.4
SRGAP3-207ENST00000485983 ERLIN2O94905 339 aa12.55□□□□□ -0.4
SRGAP3-207ENST00000485983 CCT4P50991 539 aaKnown RBP12.55□□□□□ -0.4
SRGAP3-207ENST00000485983 ANKRD18AQ8IVF6 992 aa12.55□□□□□ -0.4
SRGAP3-207ENST00000485983 NUP133Q8WUM0 1156 aa12.55□□□□□ -0.4
SRGAP3-207ENST00000485983 RAI14Q9P0K7 980 aa12.55□□□□□ -0.4
SRGAP3-207ENST00000485983 STARD3NLO95772 234 aa12.55□□□□□ -0.4
SRGAP3-207ENST00000485983 HSP90AA2PQ14568 343 aaPredicted RBP12.55□□□□□ -0.4
SRGAP3-207ENST00000485983 ANKRD50Q9ULJ7 1429 aa12.55□□□□□ -0.4
SRGAP3-207ENST00000485983 DNAI2Q9GZS0 605 aa12.55□□□□□ -0.4
SRGAP3-207ENST00000485983 SLC52A1Q9NWF4 448 aa12.55□□□□□ -0.4
SRGAP3-207ENST00000485983 ZNF652Q9Y2D9 606 aa12.55□□□□□ -0.4
SRGAP3-207ENST00000485983 MATR3P43243 847 aaKnown RBP eCLIP12.55□□□□□ -0.4
SRGAP3-207ENST00000485983 PAXIP1Q6ZW49 1069 aaPredicted RBP12.55□□□□□ -0.4
SRGAP3-207ENST00000485983 SIL1Q9H173 461 aa12.55□□□□□ -0.4
SRGAP3-207ENST00000485983 SMC2O95347 1197 aa12.54□□□□□ -0.4
SRGAP3-207ENST00000485983 CDK19Q9BWU1 502 aa12.54□□□□□ -0.4
SRGAP3-207ENST00000485983 ZNF644Q9H582 1327 aaPredicted RBP12.54□□□□□ -0.4
SRGAP3-207ENST00000485983 ANKRD1Q15327 319 aa12.54□□□□□ -0.4
SRGAP3-207ENST00000485983 UBAC1Q9BSL1 405 aa12.54□□□□□ -0.4
SRGAP3-207ENST00000485983 IBSPP21815 317 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms