RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 RC3H1Q5TC82 1133 aaKnown RBP9.2□□□□□ -0.94
VPS41-213ENST00000485955 MRGPRX2Q96LB1 330 aa9.2□□□□□ -0.94
VPS41-213ENST00000485955 WNT7BP56706 349 aa9.19□□□□□ -0.94
VPS41-213ENST00000485955 LINC01559Q495D7 138 aa9.19□□□□□ -0.94
VPS41-213ENST00000485955 HELBQ8NG08 1087 aaPredicted RBP9.19□□□□□ -0.94
VPS41-213ENST00000485955 PCMTD1Q96MG8 357 aaPredicted RBP9.19□□□□□ -0.94
VPS41-213ENST00000485955 TOR4AQ9NXH8 423 aa9.19□□□□□ -0.94
VPS41-213ENST00000485955 LRRN4Q8WUT4 740 aa9.18□□□□□ -0.94
VPS41-213ENST00000485955 RFC5P40937 340 aa9.17□□□□□ -0.94
VPS41-213ENST00000485955 AP1G2O75843 785 aa9.15□□□□□ -0.94
VPS41-213ENST00000485955 TRAF7Q6Q0C0 670 aa9.15□□□□□ -0.94
VPS41-213ENST00000485955 CYP4X1Q8N118 509 aa9.15□□□□□ -0.94
VPS41-213ENST00000485955 ZNF511Q8NB15 262 aa9.15□□□□□ -0.94
VPS41-213ENST00000485955 FAM187AA6NFU0 413 aa9.14□□□□□ -0.95
VPS41-213ENST00000485955 TTC24A2A3L6 582 aaPredicted RBP9.13□□□□□ -0.95
VPS41-213ENST00000485955 J3QL48 77 aa9.13□□□□□ -0.95
VPS41-213ENST00000485955 SIAH2O43255 324 aa9.13□□□□□ -0.95
VPS41-213ENST00000485955 DGAT1O75907 488 aa9.13□□□□□ -0.95
VPS41-213ENST00000485955 PKDCCQ504Y2 493 aa9.13□□□□□ -0.95
VPS41-213ENST00000485955 EHBP1Q8NDI1 1231 aa9.13□□□□□ -0.95
VPS41-213ENST00000485955 SNIP1Q8TAD8 396 aaKnown RBP9.13□□□□□ -0.95
VPS41-213ENST00000485955 FOXJ1Q92949 421 aa9.13□□□□□ -0.95
VPS41-213ENST00000485955 SMPD1P17405 629 aa9.12□□□□□ -0.95
VPS41-213ENST00000485955 MYT1Q01538 1121 aa9.12□□□□□ -0.95
VPS41-213ENST00000485955 NR6A1Q15406 480 aa9.11□□□□□ -0.95
VPS41-213ENST00000485955 EPS8L1Q8TE68 723 aa9.11□□□□□ -0.95
VPS41-213ENST00000485955 HMX1Q9NP08 348 aaPredicted RBP9.11□□□□□ -0.95
VPS41-213ENST00000485955 USP17L8P0C7I0 530 aa9.1□□□□□ -0.95
VPS41-213ENST00000485955 C4orf48Q5BLP8 95 aa9.1□□□□□ -0.95
VPS41-213ENST00000485955 ALDH1A1P00352 501 aa9.08□□□□□ -0.96
VPS41-213ENST00000485955 TMEM259Q4ZIN3 620 aa9.08□□□□□ -0.96
VPS41-213ENST00000485955 AVPP01185 164 aa9.07□□□□□ -0.96
VPS41-213ENST00000485955 VARSP26640 1264 aaKnown RBP9.07□□□□□ -0.96
VPS41-213ENST00000485955 ARMC2Q8NEN0 867 aa9.07□□□□□ -0.96
VPS41-213ENST00000485955 HPS1Q92902 700 aa9.07□□□□□ -0.96
VPS41-213ENST00000485955 ST8SIA5O15466 376 aa9.06□□□□□ -0.96
VPS41-213ENST00000485955 TLL2Q9Y6L7 1015 aa9.06□□□□□ -0.96
VPS41-213ENST00000485955 AGERQ15109 404 aa9.05□□□□□ -0.96
VPS41-213ENST00000485955 SH3BP5LQ7L8J4 393 aa9.05□□□□□ -0.96
VPS41-213ENST00000485955 SH3RF1Q7Z6J0 888 aa9.05□□□□□ -0.96
VPS41-213ENST00000485955 TRIM34Q9BYJ4 488 aa9.05□□□□□ -0.96
VPS41-213ENST00000485955 AAASQ9NRG9 546 aa9.05□□□□□ -0.96
VPS41-213ENST00000485955 FKBPLQ9UIM3 349 aa9.05□□□□□ -0.96
VPS41-213ENST00000485955 BPHLQ86WA6 291 aaPredicted RBP9.04□□□□□ -0.96
VPS41-213ENST00000485955 DACH1Q9UI36 760 aa9.04□□□□□ -0.96
VPS41-213ENST00000485955 NBPF14Q5TI25 921 aa9.03□□□□□ -0.96
VPS41-213ENST00000485955 PDXDC2PQ6P474 469 aa9.02□□□□□ -0.97
VPS41-213ENST00000485955 MPNDQ8N594 471 aa9.02□□□□□ -0.97
VPS41-213ENST00000485955 FAM174AQ8TBP5 190 aa9.02□□□□□ -0.97
VPS41-213ENST00000485955 GJD4Q96KN9 370 aaPredicted RBP9.02□□□□□ -0.97
VPS41-213ENST00000485955 OCSTAMPQ9BR26 566 aa9.02□□□□□ -0.97
VPS41-213ENST00000485955 MAGEB6P1A0A0J9YX57 407 aa9.01□□□□□ -0.97
VPS41-213ENST00000485955 ARID5BQ14865 1188 aa9.01□□□□□ -0.97
VPS41-213ENST00000485955 CRIPAKQ8N1N5 446 aa9.01□□□□□ -0.97
VPS41-213ENST00000485955 GPKOWQ92917 476 aaPredicted RBP eCLIP9.01□□□□□ -0.97
VPS41-213ENST00000485955 CDK15Q96Q40 435 aa9.01□□□□□ -0.97
VPS41-213ENST00000485955 CARD14Q9BXL6 1004 aa9.01□□□□□ -0.97
VPS41-213ENST00000485955 SNRKQ9NRH2 765 aa9.01□□□□□ -0.97
VPS41-213ENST00000485955 POTECB2RU33 542 aa9□□□□□ -0.97
VPS41-213ENST00000485955 BANK1Q8NDB2 785 aa9□□□□□ -0.97
VPS41-213ENST00000485955 C1QTNF2Q9BXJ5 285 aa9□□□□□ -0.97
VPS41-213ENST00000485955 WASF2Q9Y6W5 498 aa9□□□□□ -0.97
VPS41-213ENST00000485955 AXIN1O15169 862 aa8.99□□□□□ -0.97
VPS41-213ENST00000485955 GRM5P41594 1212 aa8.99□□□□□ -0.97
VPS41-213ENST00000485955 SMCPP49901 116 aaPredicted RBP8.99□□□□□ -0.97
VPS41-213ENST00000485955 CTC1Q2NKJ3 1217 aa8.98□□□□□ -0.97
VPS41-213ENST00000485955 MTMR14Q8NCE2 650 aa8.98□□□□□ -0.97
VPS41-213ENST00000485955 ARHGAP9Q9BRR9 750 aa8.98□□□□□ -0.97
VPS41-213ENST00000485955 ADH1CP00326 375 aa8.97□□□□□ -0.97
VPS41-213ENST00000485955 ERFEQ4G0M1 354 aa8.97□□□□□ -0.97
VPS41-213ENST00000485955 ZC3H4Q9UPT8 1303 aaKnown RBP8.97□□□□□ -0.97
VPS41-213ENST00000485955 NR3C2P08235 984 aa8.96□□□□□ -0.98
VPS41-213ENST00000485955 NNTQ13423 1086 aa8.96□□□□□ -0.98
VPS41-213ENST00000485955 TRMT44Q8IYL2 757 aaKnown RBP8.96□□□□□ -0.98
VPS41-213ENST00000485955 PTK2Q05397 1052 aa8.95□□□□□ -0.98
VPS41-213ENST00000485955 ZBTB33Q86T24 672 aa8.95□□□□□ -0.98
VPS41-213ENST00000485955 KLF16Q9BXK1 252 aaPredicted RBP8.95□□□□□ -0.98
VPS41-213ENST00000485955 GPR37L1O60883 481 aa8.94□□□□□ -0.98
VPS41-213ENST00000485955 ZNF787Q6DD87 383 aa8.94□□□□□ -0.98
VPS41-213ENST00000485955 ADAM32Q8TC27 787 aa8.94□□□□□ -0.98
VPS41-213ENST00000485955 GPSM3Q9Y4H4 160 aa8.94□□□□□ -0.98
VPS41-213ENST00000485955 CAPN5O15484 640 aaPredicted RBP8.92□□□□□ -0.98
VPS41-213ENST00000485955 NR5A1Q13285 461 aa8.92□□□□□ -0.98
VPS41-213ENST00000485955 VASH1Q7L8A9 365 aaPredicted RBP8.92□□□□□ -0.98
VPS41-213ENST00000485955 PNMA1Q8ND90 353 aa8.92□□□□□ -0.98
VPS41-213ENST00000485955 ATP13A2Q9NQ11 1180 aa8.92□□□□□ -0.98
VPS41-213ENST00000485955 GMPR2Q9P2T1 348 aaKnown RBP8.92□□□□□ -0.98
VPS41-213ENST00000485955 MAP4K5Q9Y4K4 846 aa8.92□□□□□ -0.98
VPS41-213ENST00000485955 SOCS7O14512 581 aa8.9□□□□□ -0.98
VPS41-213ENST00000485955 TIMP2P16035 220 aa8.9□□□□□ -0.98
VPS41-213ENST00000485955 FSHRP23945 695 aa8.9□□□□□ -0.98
VPS41-213ENST00000485955 WDR4P57081 412 aaKnown RBP8.9□□□□□ -0.98
VPS41-213ENST00000485955 ZFAND3Q9H8U3 227 aa8.9□□□□□ -0.98
VPS41-213ENST00000485955 FBXO45P0C2W1 286 aa8.89□□□□□ -0.99
VPS41-213ENST00000485955 BMP1P13497 986 aa8.89□□□□□ -0.99
VPS41-213ENST00000485955 ITPKCQ96DU7 683 aa8.89□□□□□ -0.99
VPS41-213ENST00000485955 SLC10A4Q96EP9 437 aa8.89□□□□□ -0.99
VPS41-213ENST00000485955 KCTD15Q96SI1 283 aaPredicted RBP8.89□□□□□ -0.99
VPS41-213ENST00000485955 ZBBXA8MT70 800 aa8.88□□□□□ -0.99
VPS41-213ENST00000485955 ZIC2O95409 532 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms