RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 ATF7IPQ6VMQ6 1270 aa28.52■■■□□ 2.16
CLN5-202ENST00000485938 SAFB2Q14151 953 aaKnown RBP eCLIP28.51■■■□□ 2.15
CLN5-202ENST00000485938 FAM43AQ8N2R8 423 aa28.51■■■□□ 2.15
CLN5-202ENST00000485938 GGNBP2Q9H3C7 697 aa28.51■■■□□ 2.15
CLN5-202ENST00000485938 ITPRIPQ8IWB1 547 aa28.5■■■□□ 2.15
CLN5-202ENST00000485938 C22orf23Q9BZE7 217 aa28.5■■■□□ 2.15
CLN5-202ENST00000485938 RAPGEF3O95398 923 aa28.49■■■□□ 2.15
CLN5-202ENST00000485938 SMC5Q8IY18 1101 aa28.48■■■□□ 2.15
CLN5-202ENST00000485938 ANKRD26Q9UPS8 1709 aa28.48■■■□□ 2.15
CLN5-202ENST00000485938 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.48■■■□□ 2.15
CLN5-202ENST00000485938 NOB1Q9ULX3 412 aaKnown RBP28.48■■■□□ 2.15
CLN5-202ENST00000485938 ZFYVE9O95405 1425 aa28.47■■■□□ 2.15
CLN5-202ENST00000485938 MED14O60244 1454 aa28.47■■■□□ 2.15
CLN5-202ENST00000485938 MFAP1P55081 439 aaKnown RBP28.46■■■□□ 2.15
CLN5-202ENST00000485938 SRPK2P78362 688 aaKnown RBP28.46■■■□□ 2.15
CLN5-202ENST00000485938 RIMBP3CA6NJZ7 1639 aa28.46■■■□□ 2.15
CLN5-202ENST00000485938 RIMBP3BA6NNM3 1639 aa28.46■■■□□ 2.15
CLN5-202ENST00000485938 RIMBP3Q9UFD9 1639 aa28.46■■■□□ 2.15
CLN5-202ENST00000485938 FYB1O15117 783 aa28.44■■■□□ 2.14
CLN5-202ENST00000485938 L1TD1Q5T7N2 865 aaKnown RBP28.44■■■□□ 2.14
CLN5-202ENST00000485938 TMEM57Q8N5G2 664 aa28.44■■■□□ 2.14
CLN5-202ENST00000485938 ZBTB40Q9NUA8 1239 aa28.44■■■□□ 2.14
CLN5-202ENST00000485938 SPRYD3Q8NCJ5 442 aa28.43■■■□□ 2.14
CLN5-202ENST00000485938 STK26Q9P289 416 aa28.43■■■□□ 2.14
CLN5-202ENST00000485938 CD163L1Q9NR16 1453 aa28.43■■■□□ 2.14
CLN5-202ENST00000485938 ATAD2Q6PL18 1390 aa28.43■■■□□ 2.14
CLN5-202ENST00000485938 ARHGAP31Q2M1Z3 1444 aa28.42■■■□□ 2.14
CLN5-202ENST00000485938 RIPK4P57078 832 aa28.42■■■□□ 2.14
CLN5-202ENST00000485938 IDI1Q13907 227 aa28.42■■■□□ 2.14
CLN5-202ENST00000485938 PTPRMP28827 1452 aa28.42■■■□□ 2.14
CLN5-202ENST00000485938 MCM4P33991 863 aa28.42■■■□□ 2.14
CLN5-202ENST00000485938 TERF2IPQ9NYB0 399 aa28.42■■■□□ 2.14
CLN5-202ENST00000485938 KIF16BQ96L93 1317 aa28.41■■■□□ 2.14
CLN5-202ENST00000485938 CHMP5Q9NZZ3 219 aa28.4■■■□□ 2.14
CLN5-202ENST00000485938 CLTCQ00610 1675 aaKnown RBP28.4■■■□□ 2.14
CLN5-202ENST00000485938 PNPLA6Q8IY17 1366 aa28.39■■■□□ 2.14
CLN5-202ENST00000485938 IPO8O15397 1037 aaKnown RBP28.38■■■□□ 2.13
CLN5-202ENST00000485938 DIAPH1O60610 1272 aaKnown RBP28.38■■■□□ 2.13
CLN5-202ENST00000485938 NEO1Q92859 1461 aa28.37■■■□□ 2.13
CLN5-202ENST00000485938 MINK1Q8N4C8 1332 aaPredicted RBP28.36■■■□□ 2.13
CLN5-202ENST00000485938 DIP2CQ9Y2E4 1556 aa28.36■■■□□ 2.13
CLN5-202ENST00000485938 NUCB1Q02818 461 aa28.36■■■□□ 2.13
CLN5-202ENST00000485938 ALDH1L2Q3SY69 923 aa28.36■■■□□ 2.13
CLN5-202ENST00000485938 PNNQ9H307 717 aaKnown RBP28.36■■■□□ 2.13
CLN5-202ENST00000485938 MYO5BQ9ULV0 1848 aa28.35■■■□□ 2.13
CLN5-202ENST00000485938 SLC52A1Q9NWF4 448 aa28.35■■■□□ 2.13
CLN5-202ENST00000485938 PRAM1Q96QH2 718 aa28.34■■■□□ 2.13
CLN5-202ENST00000485938 FSD2A1L4K1 749 aa28.34■■■□□ 2.13
CLN5-202ENST00000485938 CDC42BPGQ6DT37 1551 aa28.33■■■□□ 2.13
CLN5-202ENST00000485938 SENP3Q9H4L4 574 aaPredicted RBP28.32■■■□□ 2.12
CLN5-202ENST00000485938 HSCBQ8IWL3 235 aa28.32■■■□□ 2.12
CLN5-202ENST00000485938 YTHDC2Q9H6S0 1430 aaKnown RBP28.32■■■□□ 2.12
CLN5-202ENST00000485938 RBM25P49756 843 aaKnown RBP28.31■■■□□ 2.12
CLN5-202ENST00000485938 ZNF692Q9BU19 519 aaPredicted RBP28.31■■■□□ 2.12
CLN5-202ENST00000485938 TMEM131LA2VDJ0 1609 aa28.31■■■□□ 2.12
CLN5-202ENST00000485938 LRRC7Q96NW7 1537 aa28.31■■■□□ 2.12
CLN5-202ENST00000485938 NCOA3Q9Y6Q9 1424 aa28.31■■■□□ 2.12
CLN5-202ENST00000485938 FCHSD2O94868 740 aa28.3■■■□□ 2.12
CLN5-202ENST00000485938 KIF20BQ96Q89 1820 aa28.3■■■□□ 2.12
CLN5-202ENST00000485938 GOLGA6L3A6NEY3 463 aa28.3■■■□□ 2.12
CLN5-202ENST00000485938 HDGFL2Q7Z4V5 671 aaPredicted RBP28.3■■■□□ 2.12
CLN5-202ENST00000485938 BRPF1P55201 1214 aaPredicted RBP28.29■■■□□ 2.12
CLN5-202ENST00000485938 FAM69CQ0P6D2 419 aa28.29■■■□□ 2.12
CLN5-202ENST00000485938 XRCC6P12956 609 aaKnown RBP eCLIP28.29■■■□□ 2.12
CLN5-202ENST00000485938 CHD1LQ86WJ1 897 aa28.29■■■□□ 2.12
CLN5-202ENST00000485938 LNPKQ9C0E8 428 aa28.29■■■□□ 2.12
CLN5-202ENST00000485938 PPIP5K1Q6PFW1 1433 aa28.28■■■□□ 2.12
CLN5-202ENST00000485938 FAM135BQ49AJ0 1406 aa28.27■■■□□ 2.12
CLN5-202ENST00000485938 TRAK2O60296 914 aa28.27■■■□□ 2.12
CLN5-202ENST00000485938 DDIT3P35638 169 aa28.27■■■□□ 2.12
CLN5-202ENST00000485938 ZNF428Q96B54 188 aa28.27■■■□□ 2.12
CLN5-202ENST00000485938 RICTORQ6R327 1708 aa28.27■■■□□ 2.12
CLN5-202ENST00000485938 SNX21Q969T3 373 aa28.26■■■□□ 2.12
CLN5-202ENST00000485938 ARHGEF40Q8TER5 1519 aa28.26■■■□□ 2.11
CLN5-202ENST00000485938 RSPH6AQ9H0K4 717 aa28.26■■■□□ 2.11
CLN5-202ENST00000485938 PREX1Q8TCU6 1659 aa28.26■■■□□ 2.11
CLN5-202ENST00000485938 GZF1Q9H116 711 aaPredicted RBP28.25■■■□□ 2.11
CLN5-202ENST00000485938 CDK19Q9BWU1 502 aa28.25■■■□□ 2.11
CLN5-202ENST00000485938 RRAGDQ9NQL2 400 aaPredicted RBP28.25■■■□□ 2.11
CLN5-202ENST00000485938 PRKAR2BP31323 418 aa28.24■■■□□ 2.11
CLN5-202ENST00000485938 YEATS2Q9ULM3 1422 aa28.24■■■□□ 2.11
CLN5-202ENST00000485938 CABP1Q9NZU7 370 aa28.24■■■□□ 2.11
CLN5-202ENST00000485938 TSPOAP1O95153 1857 aa28.23■■■□□ 2.11
CLN5-202ENST00000485938 BMP2KLQ5H9B9 411 aa28.23■■■□□ 2.11
CLN5-202ENST00000485938 ZBTB7BO15156 539 aaPredicted RBP28.21■■■□□ 2.11
CLN5-202ENST00000485938 PIK3R4Q99570 1358 aa28.21■■■□□ 2.11
CLN5-202ENST00000485938 DDX11L8A8MPP1 907 aa28.21■■■□□ 2.11
CLN5-202ENST00000485938 ARXQ96QS3 562 aa28.21■■■□□ 2.11
CLN5-202ENST00000485938 ALKQ9UM73 1620 aa28.21■■■□□ 2.11
CLN5-202ENST00000485938 POLKQ9UBT6 870 aa28.2■■■□□ 2.11
CLN5-202ENST00000485938 PTCH1Q13635 1447 aa28.19■■■□□ 2.1
CLN5-202ENST00000485938 MRPL50Q8N5N7 158 aaKnown RBP28.19■■■□□ 2.1
CLN5-202ENST00000485938 ARHGAP45Q92619 1136 aa28.19■■■□□ 2.1
CLN5-202ENST00000485938 DIP2BQ9P265 1576 aa28.19■■■□□ 2.1
CLN5-202ENST00000485938 VAMP4O75379 141 aa28.19■■■□□ 2.1
CLN5-202ENST00000485938 PRKCSHP14314 528 aaPredicted RBP28.19■■■□□ 2.1
CLN5-202ENST00000485938 GCC1Q96CN9 775 aa28.19■■■□□ 2.1
CLN5-202ENST00000485938 NFE2L2Q16236 605 aa28.18■■■□□ 2.1
CLN5-202ENST00000485938 PANK2Q9BZ23 570 aa28.18■■■□□ 2.1
CLN5-202ENST00000485938 PHACTR3Q96KR7 559 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms