RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 MARF1Q9Y4F3 1742 aaKnown RBP15.48■□□□□ 0.07
SND1-212ENST00000485871 HDGFL2Q7Z4V5 671 aaPredicted RBP15.48■□□□□ 0.07
SND1-212ENST00000485871 CADPS2Q86UW7 1296 aa15.47■□□□□ 0.07
SND1-212ENST00000485871 UPF1Q92900 1129 aaKnown RBP eCLIP15.47■□□□□ 0.076e-36■■■■■ 33.2
SND1-212ENST00000485871 NSD2O96028 1365 aa15.47■□□□□ 0.07
SND1-212ENST00000485871 PMFBP1Q8TBY8 1022 aa15.46■□□□□ 0.07
SND1-212ENST00000485871 ZNF692Q9BU19 519 aaPredicted RBP15.46■□□□□ 0.07
SND1-212ENST00000485871 PIK3C2AO00443 1686 aa15.46■□□□□ 0.07
SND1-212ENST00000485871 ATF3P18847 181 aa15.45■□□□□ 0.06
SND1-212ENST00000485871 ORAI2Q96SN7 254 aa15.45■□□□□ 0.06
SND1-212ENST00000485871 PHF8Q9UPP1 1060 aa15.45■□□□□ 0.06
SND1-212ENST00000485871 CGNL1Q0VF96 1302 aa15.44■□□□□ 0.06
SND1-212ENST00000485871 RALBP1Q15311 655 aa15.44■□□□□ 0.06
SND1-212ENST00000485871 CC2D1BQ5T0F9 858 aaKnown RBP15.44■□□□□ 0.06
SND1-212ENST00000485871 MEX3CQ5U5Q3 659 aaKnown RBP15.44■□□□□ 0.06
SND1-212ENST00000485871 JCADQ9P266 1359 aa15.44■□□□□ 0.06
SND1-212ENST00000485871 NHSL1Q5SYE7 1610 aa15.43■□□□□ 0.06
SND1-212ENST00000485871 FYB1O15117 783 aa15.43■□□□□ 0.06
SND1-212ENST00000485871 ZNF772Q68DY9 489 aaPredicted RBP15.43■□□□□ 0.06
SND1-212ENST00000485871 BRD4O60885 1362 aaPredicted RBP15.43■□□□□ 0.06
SND1-212ENST00000485871 ALS2Q96Q42 1657 aa15.43■□□□□ 0.06
SND1-212ENST00000485871 ROBO1Q9Y6N7 1651 aa15.42■□□□□ 0.06
SND1-212ENST00000485871 CCER2I3L3R5 266 aa15.42■□□□□ 0.06
SND1-212ENST00000485871 ESCO1Q5FWF5 840 aa15.42■□□□□ 0.06
SND1-212ENST00000485871 OVOS2A0A0J9YW53 1432 aa15.42■□□□□ 0.06
SND1-212ENST00000485871 OVOS2Q6IE36 1432 aa15.42■□□□□ 0.06
SND1-212ENST00000485871 TTC21BQ7Z4L5 1316 aa15.42■□□□□ 0.06
SND1-212ENST00000485871 SLAIN2Q9P270 581 aa15.41■□□□□ 0.06
SND1-212ENST00000485871 NGDNQ8NEJ9 315 aaKnown RBP15.4■□□□□ 0.06
SND1-212ENST00000485871 TTC21AQ8NDW8 1320 aa15.4■□□□□ 0.06
SND1-212ENST00000485871 MYBBP1AQ9BQG0 1328 aaKnown RBP15.4■□□□□ 0.06
SND1-212ENST00000485871 PXDNQ92626 1479 aa15.4■□□□□ 0.06
SND1-212ENST00000485871 USP31Q70CQ4 1352 aa15.39■□□□□ 0.05
SND1-212ENST00000485871 MAP2P11137 1827 aaKnown RBP15.39■□□□□ 0.05
SND1-212ENST00000485871 CCDC184Q52MB2 194 aa15.39■□□□□ 0.05
SND1-212ENST00000485871 CNGB1Q14028 1251 aaPredicted RBP15.38■□□□□ 0.05
SND1-212ENST00000485871 BRINP3Q76B58 766 aa15.38■□□□□ 0.05
SND1-212ENST00000485871 NME9Q86XW9 330 aa15.38■□□□□ 0.05
SND1-212ENST00000485871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.38■□□□□ 0.05
SND1-212ENST00000485871 GGNBP2Q9H3C7 697 aa15.38■□□□□ 0.05
SND1-212ENST00000485871 CRYBG1Q9Y4K1 1723 aa15.37■□□□□ 0.05
SND1-212ENST00000485871 RXRBP28702 533 aa15.37■□□□□ 0.05
SND1-212ENST00000485871 PPP2R1AP30153 589 aa15.37■□□□□ 0.05
SND1-212ENST00000485871 ZRANB1Q9UGI0 708 aa15.37■□□□□ 0.05
SND1-212ENST00000485871 FOXO3O43524 673 aa15.36■□□□□ 0.05
SND1-212ENST00000485871 SPATA31A6Q5VVP1 1343 aa15.36■□□□□ 0.05
SND1-212ENST00000485871 AHDC1Q5TGY3 1603 aaPredicted RBP15.35■□□□□ 0.05
SND1-212ENST00000485871 PHLPP1O60346 1717 aa15.34■□□□□ 0.05
SND1-212ENST00000485871 MORC1Q86VD1 984 aa15.34■□□□□ 0.05
SND1-212ENST00000485871 NLRP13Q86W25 1043 aa15.34■□□□□ 0.05
SND1-212ENST00000485871 SHPRHQ149N8 1683 aa15.34■□□□□ 0.05
SND1-212ENST00000485871 SBNO1A3KN83 1393 aa15.34■□□□□ 0.05
SND1-212ENST00000485871 SMG6Q86US8 1419 aaKnown RBP15.34■□□□□ 0.05
SND1-212ENST00000485871 SLIT3O75094 1523 aa15.33■□□□□ 0.05
SND1-212ENST00000485871 KRT28Q7Z3Y7 464 aa15.33■□□□□ 0.04
SND1-212ENST00000485871 NPHP3Q7Z494 1330 aa15.33■□□□□ 0.04
SND1-212ENST00000485871 AATKQ6ZMQ8 1374 aa15.33■□□□□ 0.04
SND1-212ENST00000485871 PHRF1Q9P1Y6 1649 aaKnown RBP15.32■□□□□ 0.04
SND1-212ENST00000485871 PSME1Q06323 249 aa15.32■□□□□ 0.04
SND1-212ENST00000485871 DDX17Q92841 729 aaKnown RBP15.32■□□□□ 0.04
SND1-212ENST00000485871 SOS2Q07890 1332 aaPredicted RBP15.32■□□□□ 0.04
SND1-212ENST00000485871 PEAK1Q9H792 1746 aa15.31■□□□□ 0.04
SND1-212ENST00000485871 XPCQ01831 940 aaPredicted RBP15.31■□□□□ 0.04
SND1-212ENST00000485871 TNS3Q68CZ2 1445 aa15.31■□□□□ 0.04
SND1-212ENST00000485871 COL3A1P02461 1466 aaPredicted RBP15.31■□□□□ 0.04
SND1-212ENST00000485871 NFAT5O94916 1531 aa15.31■□□□□ 0.04
SND1-212ENST00000485871 ABCA3Q99758 1704 aa15.31■□□□□ 0.04
SND1-212ENST00000485871 LTN1O94822 1766 aa15.3■□□□□ 0.04
SND1-212ENST00000485871 COG3Q96JB2 828 aa15.3■□□□□ 0.04
SND1-212ENST00000485871 LRP6O75581 1613 aa15.29■□□□□ 0.04
SND1-212ENST00000485871 NUTM2BA6NNL0 878 aaPredicted RBP15.29■□□□□ 0.04
SND1-212ENST00000485871 NUTM2EB1AL46 878 aaPredicted RBP15.29■□□□□ 0.04
SND1-212ENST00000485871 NUTM2AQ8IVF1 878 aaPredicted RBP15.29■□□□□ 0.04
SND1-212ENST00000485871 MRS2Q9HD23 443 aa15.29■□□□□ 0.04
SND1-212ENST00000485871 COL16A1Q07092 1604 aaPredicted RBP15.28■□□□□ 0.04
SND1-212ENST00000485871 USP19O94966 1318 aa15.28■□□□□ 0.04
SND1-212ENST00000485871 SPATA31A3Q5VYP0 1347 aa15.28■□□□□ 0.04
SND1-212ENST00000485871 CDK12Q9NYV4 1490 aaPredicted RBP15.27■□□□□ 0.04
SND1-212ENST00000485871 PNPLA6Q8IY17 1366 aa15.27■□□□□ 0.04
SND1-212ENST00000485871 FBLN1P23142 703 aa15.27■□□□□ 0.04
SND1-212ENST00000485871 TNNT2P45379 298 aaPredicted RBP15.27■□□□□ 0.04
SND1-212ENST00000485871 ABTB2Q8N961 1025 aa15.27■□□□□ 0.04
SND1-212ENST00000485871 INSRP06213 1382 aa15.26■□□□□ 0.03
SND1-212ENST00000485871 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
SND1-212ENST00000485871 MTHFSP49914 203 aa15.26■□□□□ 0.03
SND1-212ENST00000485871 NLRP6P59044 892 aa15.26■□□□□ 0.03
SND1-212ENST00000485871 PNISRQ8TF01 805 aaKnown RBP15.26■□□□□ 0.03
SND1-212ENST00000485871 POLKQ9UBT6 870 aa15.26■□□□□ 0.03
SND1-212ENST00000485871 COL22A1Q8NFW1 1626 aaPredicted RBP15.25■□□□□ 0.03
SND1-212ENST00000485871 AFF2P51816 1311 aa15.24■□□□□ 0.03
SND1-212ENST00000485871 NUTM2GQ5VZR2 741 aa15.24■□□□□ 0.03
SND1-212ENST00000485871 ARHGEF10O15013 1369 aa15.24■□□□□ 0.03
SND1-212ENST00000485871 COL18A1P39060 1754 aa15.23■□□□□ 0.03
SND1-212ENST00000485871 RGPD1P0DJD0 1748 aa15.23■□□□□ 0.03
SND1-212ENST00000485871 EMILIN1Q9Y6C2 1016 aa15.22■□□□□ 0.03
SND1-212ENST00000485871 RGPD5Q99666 1765 aa15.21■□□□□ 0.03
SND1-212ENST00000485871 MAP3K19Q56UN5 1328 aa15.21■□□□□ 0.03
SND1-212ENST00000485871 RRS1Q15050 365 aaKnown RBP15.21■□□□□ 0.03
SND1-212ENST00000485871 QTRT2Q9H974 415 aaKnown RBP15.21■□□□□ 0.03
SND1-212ENST00000485871 KIF24Q5T7B8 1368 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms