RNA–Protein interactions for RNA: ENST00000485667.1

CLCN2-208, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 2

Gene CLCN2, Length 1,652 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-208ENST00000485667 CABP2Q9NPB3 220 aa22.55■■□□□ 1.2
CLCN2-208ENST00000485667 EVC2Q86UK5 1308 aa22.53■■□□□ 1.2
CLCN2-208ENST00000485667 QRICH2Q9H0J4 1663 aa22.53■■□□□ 1.2
CLCN2-208ENST00000485667 ITSN1Q15811 1721 aa22.53■■□□□ 1.2
CLCN2-208ENST00000485667 TRPM3Q9HCF6 1732 aaPredicted RBP22.53■■□□□ 1.2
CLCN2-208ENST00000485667 NGDNQ8NEJ9 315 aaKnown RBP22.52■■□□□ 1.2
CLCN2-208ENST00000485667 CCDC61Q9Y6R9 512 aa22.52■■□□□ 1.2
CLCN2-208ENST00000485667 NWD2Q9ULI1 1742 aa22.52■■□□□ 1.2
CLCN2-208ENST00000485667 GLI3P10071 1580 aa22.52■■□□□ 1.2
CLCN2-208ENST00000485667 CCDC9Q9Y3X0 531 aaKnown RBP22.52■■□□□ 1.2
CLCN2-208ENST00000485667 ST20-MTHFSA0A0A6YYL1 179 aa22.5■■□□□ 1.19
CLCN2-208ENST00000485667 ALS2Q96Q42 1657 aa22.49■■□□□ 1.19
CLCN2-208ENST00000485667 ATP7BP35670 1465 aa22.49■■□□□ 1.19
CLCN2-208ENST00000485667 PAK3O75914 559 aaPredicted RBP22.48■■□□□ 1.19
CLCN2-208ENST00000485667 VPS72Q15906 364 aa22.46■■□□□ 1.19
CLCN2-208ENST00000485667 USP47Q96K76 1375 aa22.45■■□□□ 1.18
CLCN2-208ENST00000485667 PLEKHG3A1L390 1219 aa22.45■■□□□ 1.18
CLCN2-208ENST00000485667 CABP1Q9NZU7 370 aa22.45■■□□□ 1.18
CLCN2-208ENST00000485667 ACEP12821 1306 aa22.44■■□□□ 1.18
CLCN2-208ENST00000485667 CCDC125Q86Z20 511 aa22.44■■□□□ 1.18
CLCN2-208ENST00000485667 SBNO2Q9Y2G9 1366 aa22.44■■□□□ 1.18
CLCN2-208ENST00000485667 BRWD3Q6RI45 1802 aa22.44■■□□□ 1.18
CLCN2-208ENST00000485667 COL14A1Q05707 1796 aaKnown RBP22.43■■□□□ 1.18
CLCN2-208ENST00000485667 FAM83GA6ND36 823 aa22.43■■□□□ 1.18
CLCN2-208ENST00000485667 PPIP5K1Q6PFW1 1433 aa22.43■■□□□ 1.18
CLCN2-208ENST00000485667 A0A0G2JS52 829 aa22.42■■□□□ 1.18
CLCN2-208ENST00000485667 MYT1Q01538 1121 aa22.42■■□□□ 1.18
CLCN2-208ENST00000485667 SEPT12Q8IYM1 358 aa22.42■■□□□ 1.18
CLCN2-208ENST00000485667 TESK2Q96S53 571 aa22.42■■□□□ 1.18
CLCN2-208ENST00000485667 NRAPQ86VF7 1730 aa22.41■■□□□ 1.18
CLCN2-208ENST00000485667 EP400Q96L91 3159 aa22.41■■□□□ 1.18
CLCN2-208ENST00000485667 BTG4Q9NY30 223 aa22.4■■□□□ 1.18
CLCN2-208ENST00000485667 CRYBG1Q9Y4K1 1723 aa22.4■■□□□ 1.18
CLCN2-208ENST00000485667 TOPAZ1Q8N9V7 1692 aa22.39■■□□□ 1.18
CLCN2-208ENST00000485667 SLC24A1O60721 1099 aa22.39■■□□□ 1.18
CLCN2-208ENST00000485667 POLR3AO14802 1390 aaPredicted RBP22.38■■□□□ 1.17
CLCN2-208ENST00000485667 PRDM11Q9NQV5 511 aa22.37■■□□□ 1.17
CLCN2-208ENST00000485667 ZRANB1Q9UGI0 708 aa22.37■■□□□ 1.17
CLCN2-208ENST00000485667 BLMP54132 1417 aaPredicted RBP22.37■■□□□ 1.17
CLCN2-208ENST00000485667 SF3B2Q13435 895 aaKnown RBP22.36■■□□□ 1.17
CLCN2-208ENST00000485667 TMC1Q8TDI8 760 aa22.36■■□□□ 1.17
CLCN2-208ENST00000485667 PHRF1Q9P1Y6 1649 aaKnown RBP22.35■■□□□ 1.17
CLCN2-208ENST00000485667 TMF1P82094 1093 aa22.35■■□□□ 1.17
CLCN2-208ENST00000485667 KRT27Q7Z3Y8 459 aa22.35■■□□□ 1.17
CLCN2-208ENST00000485667 FAM98CQ17RN3 349 aaKnown RBP22.34■■□□□ 1.17
CLCN2-208ENST00000485667 ONECUT3O60422 494 aaPredicted RBP22.33■■□□□ 1.17
CLCN2-208ENST00000485667 EIF4G2P78344 907 aaKnown RBP eCLIP22.33■■□□□ 1.17
CLCN2-208ENST00000485667 NUTM2GQ5VZR2 741 aa22.33■■□□□ 1.16
CLCN2-208ENST00000485667 PUS7Q96PZ0 661 aaKnown RBP22.32■■□□□ 1.16
CLCN2-208ENST00000485667 SLC12A5Q9H2X9 1139 aa22.32■■□□□ 1.16
CLCN2-208ENST00000485667 KIAA0232Q92628 1395 aa22.31■■□□□ 1.16
CLCN2-208ENST00000485667 ZNF692Q9BU19 519 aaPredicted RBP22.31■■□□□ 1.16
CLCN2-208ENST00000485667 ABTB2Q8N961 1025 aa22.3■■□□□ 1.16
CLCN2-208ENST00000485667 HSPA5P11021 654 aaKnown RBP22.3■■□□□ 1.16
CLCN2-208ENST00000485667 SPATA31A5Q5VU36 1347 aa22.28■■□□□ 1.16
CLCN2-208ENST00000485667 SPATA31A7Q8IWB4 1347 aa22.28■■□□□ 1.16
CLCN2-208ENST00000485667 ZC3H6P61129 1189 aaKnown RBP22.28■■□□□ 1.16
CLCN2-208ENST00000485667 CHRNA2Q15822 529 aa22.28■■□□□ 1.16
CLCN2-208ENST00000485667 CDCA8Q53HL2 280 aa22.27■■□□□ 1.16
CLCN2-208ENST00000485667 USP6P35125 1406 aa22.27■■□□□ 1.16
CLCN2-208ENST00000485667 DEFB132Q7Z7B7 95 aa22.26■■□□□ 1.15
CLCN2-208ENST00000485667 STRN4Q9NRL3 753 aa22.26■■□□□ 1.15
CLCN2-208ENST00000485667 HDGFL2Q7Z4V5 671 aaPredicted RBP22.26■■□□□ 1.15
CLCN2-208ENST00000485667 KTN1Q86UP2 1357 aaKnown RBP22.26■■□□□ 1.15
CLCN2-208ENST00000485667 NRKQ7Z2Y5 1582 aa22.25■■□□□ 1.15
CLCN2-208ENST00000485667 TERF2IPQ9NYB0 399 aa22.25■■□□□ 1.15
CLCN2-208ENST00000485667 BRD4O60885 1362 aaPredicted RBP22.24■■□□□ 1.15
CLCN2-208ENST00000485667 THSD7AQ9UPZ6 1657 aa22.23■■□□□ 1.15
CLCN2-208ENST00000485667 CPSF1Q10570 1443 aaKnown RBP22.23■■□□□ 1.15
CLCN2-208ENST00000485667 EVA1CP58658 441 aa22.23■■□□□ 1.15
CLCN2-208ENST00000485667 POLR3GLQ9BT43 218 aa22.23■■□□□ 1.15
CLCN2-208ENST00000485667 TTC21BQ7Z4L5 1316 aa22.22■■□□□ 1.15
CLCN2-208ENST00000485667 NLRP6P59044 892 aa22.22■■□□□ 1.15
CLCN2-208ENST00000485667 NLRP13Q86W25 1043 aa22.22■■□□□ 1.15
CLCN2-208ENST00000485667 BAG6P46379 1132 aa22.21■■□□□ 1.15
CLCN2-208ENST00000485667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.21■■□□□ 1.15
CLCN2-208ENST00000485667 SPATA31A1Q5TZJ5 1347 aa22.21■■□□□ 1.15
CLCN2-208ENST00000485667 RGPD1P0DJD0 1748 aa22.21■■□□□ 1.15
CLCN2-208ENST00000485667 NINLQ9Y2I6 1382 aa22.2■■□□□ 1.14
CLCN2-208ENST00000485667 USP35Q9P2H5 1018 aa22.2■■□□□ 1.14
CLCN2-208ENST00000485667 SSH2Q76I76 1423 aa22.2■■□□□ 1.14
CLCN2-208ENST00000485667 USP19O94966 1318 aa22.19■■□□□ 1.14
CLCN2-208ENST00000485667 CD163L1Q9NR16 1453 aa22.19■■□□□ 1.14
CLCN2-208ENST00000485667 FAM182BQ5T319 152 aa22.18■■□□□ 1.14
CLCN2-208ENST00000485667 A0A1W2PP64 1363 aa22.18■■□□□ 1.14
CLCN2-208ENST00000485667 CPDO75976 1380 aa22.18■■□□□ 1.14
CLCN2-208ENST00000485667 TTC21AQ8NDW8 1320 aa22.17■■□□□ 1.14
CLCN2-208ENST00000485667 AKAP12Q02952 1782 aa22.16■■□□□ 1.14
CLCN2-208ENST00000485667 ZBTB7CA1YPR0 619 aa22.16■■□□□ 1.14
CLCN2-208ENST00000485667 GCP02774 474 aa22.16■■□□□ 1.14
CLCN2-208ENST00000485667 LMO7Q8WWI1 1683 aa22.15■■□□□ 1.14
CLCN2-208ENST00000485667 CAMTA1Q9Y6Y1 1673 aa22.15■■□□□ 1.14
CLCN2-208ENST00000485667 LARP1Q6PKG0 1096 aaKnown RBP22.13■■□□□ 1.13
CLCN2-208ENST00000485667 NME9Q86XW9 330 aa22.13■■□□□ 1.13
CLCN2-208ENST00000485667 EDC4Q6P2E9 1401 aaKnown RBP22.12■■□□□ 1.13
CLCN2-208ENST00000485667 ANKRD36BQ8N2N9 1353 aa22.12■■□□□ 1.13
CLCN2-208ENST00000485667 C11orf95C9JLR9 678 aaPredicted RBP22.11■■□□□ 1.13
CLCN2-208ENST00000485667 SOX12O15370 315 aa22.11■■□□□ 1.13
CLCN2-208ENST00000485667 TNS1Q9HBL0 1735 aaKnown RBP22.11■■□□□ 1.13
CLCN2-208ENST00000485667 MON2Q7Z3U7 1717 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms