RNA–Protein interactions for RNA: ENST00000485621.1

TRAPPC10-211, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-211ENST00000485621 QPCTQ16769 361 aa13.29□□□□□ -0.28
TRAPPC10-211ENST00000485621 GMPR2Q9P2T1 348 aaKnown RBP13.28□□□□□ -0.28
TRAPPC10-211ENST00000485621 SIAH2O43255 324 aa13.27□□□□□ -0.29
TRAPPC10-211ENST00000485621 MAP10Q9P2G4 905 aa13.27□□□□□ -0.29
TRAPPC10-211ENST00000485621 ZNF511Q8NB15 262 aa13.26□□□□□ -0.29
TRAPPC10-211ENST00000485621 POLR3EQ9NVU0 708 aa13.26□□□□□ -0.29
TRAPPC10-211ENST00000485621 CLK2P49760 499 aaKnown RBP13.25□□□□□ -0.29
TRAPPC10-211ENST00000485621 RSPH6AQ9H0K4 717 aa13.25□□□□□ -0.29
TRAPPC10-211ENST00000485621 WASF2Q9Y6W5 498 aa13.25□□□□□ -0.29
TRAPPC10-211ENST00000485621 C11orf95C9JLR9 678 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC10-211ENST00000485621 PER1O15534 1290 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC10-211ENST00000485621 LILRB3O75022 631 aa13.24□□□□□ -0.29
TRAPPC10-211ENST00000485621 TUSC1Q2TAM9 212 aa13.23□□□□□ -0.29
TRAPPC10-211ENST00000485621 GPBP1L1Q9HC44 474 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC10-211ENST00000485621 F12P00748 615 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC10-211ENST00000485621 ATP13A2Q9NQ11 1180 aa13.22□□□□□ -0.29
TRAPPC10-211ENST00000485621 RTL5Q5HYW3 569 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC10-211ENST00000485621 TLL2Q9Y6L7 1015 aa13.21□□□□□ -0.29
TRAPPC10-211ENST00000485621 VARSP26640 1264 aaKnown RBP13.19□□□□□ -0.3
TRAPPC10-211ENST00000485621 HELBQ8NG08 1087 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC10-211ENST00000485621 KDM4CQ9H3R0 1056 aa13.19□□□□□ -0.3
TRAPPC10-211ENST00000485621 FOXJ1Q92949 421 aa13.18□□□□□ -0.3
TRAPPC10-211ENST00000485621 ATP1B4Q9UN42 357 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC10-211ENST00000485621 PLEKHG3A1L390 1219 aa13.16□□□□□ -0.3
TRAPPC10-211ENST00000485621 AGERQ15109 404 aa13.16□□□□□ -0.3
TRAPPC10-211ENST00000485621 FAM117AQ9C073 453 aa13.15□□□□□ -0.3
TRAPPC10-211ENST00000485621 FAM174AQ8TBP5 190 aa13.14□□□□□ -0.31
TRAPPC10-211ENST00000485621 CAPN5O15484 640 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC10-211ENST00000485621 DDRGK1Q96HY6 314 aa13.13□□□□□ -0.31
TRAPPC10-211ENST00000485621 SENP2Q9HC62 589 aa13.13□□□□□ -0.31
TRAPPC10-211ENST00000485621 SNRPBP14678 240 aaKnown RBP13.12□□□□□ -0.31
TRAPPC10-211ENST00000485621 ARID5BQ14865 1188 aa13.12□□□□□ -0.31
TRAPPC10-211ENST00000485621 SKIV2LQ15477 1246 aaKnown RBP13.11□□□□□ -0.31
TRAPPC10-211ENST00000485621 BMP1P13497 986 aa13.1□□□□□ -0.31
TRAPPC10-211ENST00000485621 NNTQ13423 1086 aa13.1□□□□□ -0.31
TRAPPC10-211ENST00000485621 TRIM47Q96LD4 638 aa13.1□□□□□ -0.31
TRAPPC10-211ENST00000485621 CTDSPL2Q05D32 466 aa13.09□□□□□ -0.31
TRAPPC10-211ENST00000485621 SH3D19Q5HYK7 790 aa13.09□□□□□ -0.31
TRAPPC10-211ENST00000485621 BPHLQ86WA6 291 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC10-211ENST00000485621 MPNDQ8N594 471 aa13.09□□□□□ -0.31
TRAPPC10-211ENST00000485621 PROCA1Q8NCQ7 364 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC10-211ENST00000485621 ARMC2Q8NEN0 867 aa13.09□□□□□ -0.31
TRAPPC10-211ENST00000485621 C4orf48Q5BLP8 95 aa13.08□□□□□ -0.32
TRAPPC10-211ENST00000485621 KIFC2Q96AC6 838 aa13.07□□□□□ -0.32
TRAPPC10-211ENST00000485621 ADH1CP00326 375 aa13.06□□□□□ -0.32
TRAPPC10-211ENST00000485621 NBPF14Q5TI25 921 aa13.06□□□□□ -0.32
TRAPPC10-211ENST00000485621 TREML4Q6UXN2 200 aa13.06□□□□□ -0.32
TRAPPC10-211ENST00000485621 TRIM46Q7Z4K8 759 aa13.05□□□□□ -0.32
TRAPPC10-211ENST00000485621 MAGEB6P1A0A0J9YX57 407 aa13.04□□□□□ -0.32
TRAPPC10-211ENST00000485621 WDR4P57081 412 aaKnown RBP13.04□□□□□ -0.32
TRAPPC10-211ENST00000485621 FBXO31Q5XUX0 539 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC10-211ENST00000485621 CDK15Q96Q40 435 aa13.04□□□□□ -0.32
TRAPPC10-211ENST00000485621 LRRN4Q8WUT4 740 aa13.03□□□□□ -0.32
TRAPPC10-211ENST00000485621 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRAPPC10-211ENST00000485621 WFS1O76024 890 aa13.01□□□□□ -0.33
TRAPPC10-211ENST00000485621 TIMP2P16035 220 aa13.01□□□□□ -0.33
TRAPPC10-211ENST00000485621 CARD14Q9BXL6 1004 aa13.01□□□□□ -0.33
TRAPPC10-211ENST00000485621 AP1G2O75843 785 aa13□□□□□ -0.33
TRAPPC10-211ENST00000485621 SH3RF1Q7Z6J0 888 aa13□□□□□ -0.33
TRAPPC10-211ENST00000485621 SH3BP5LQ7L8J4 393 aa12.99□□□□□ -0.33
TRAPPC10-211ENST00000485621 NR5A1Q13285 461 aa12.98□□□□□ -0.33
TRAPPC10-211ENST00000485621 PPP2R2DQ66LE6 453 aa12.98□□□□□ -0.33
TRAPPC10-211ENST00000485621 ZIC2O95409 532 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC10-211ENST00000485621 NR3C2P08235 984 aa12.97□□□□□ -0.33
TRAPPC10-211ENST00000485621 GRM5P41594 1212 aa12.97□□□□□ -0.33
TRAPPC10-211ENST00000485621 NR6A1Q15406 480 aa12.97□□□□□ -0.33
TRAPPC10-211ENST00000485621 NEUROD2Q15784 382 aa12.97□□□□□ -0.33
TRAPPC10-211ENST00000485621 LCE2AQ5TA79 106 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC10-211ENST00000485621 ZFP42Q96MM3 310 aa12.97□□□□□ -0.33
TRAPPC10-211ENST00000485621 C1QTNF2Q9BXJ5 285 aa12.97□□□□□ -0.33
TRAPPC10-211ENST00000485621 NFX1Q12986 1120 aaKnown RBP12.96□□□□□ -0.33
TRAPPC10-211ENST00000485621 MRPL14Q6P1L8 145 aaKnown RBP12.96□□□□□ -0.33
TRAPPC10-211ENST00000485621 VASH1Q7L8A9 365 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC10-211ENST00000485621 GPKOWQ92917 476 aaPredicted RBP eCLIP12.96□□□□□ -0.33
TRAPPC10-211ENST00000485621 KLF16Q9BXK1 252 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC10-211ENST00000485621 ZFAND3Q9H8U3 227 aa12.96□□□□□ -0.33
TRAPPC10-211ENST00000485621 FSHRP23945 695 aa12.95□□□□□ -0.34
TRAPPC10-211ENST00000485621 SCARF1Q14162 830 aa12.95□□□□□ -0.34
TRAPPC10-211ENST00000485621 ITPKCQ96DU7 683 aa12.95□□□□□ -0.34
TRAPPC10-211ENST00000485621 FKBPLQ9UIM3 349 aa12.95□□□□□ -0.34
TRAPPC10-211ENST00000485621 TERTO14746 1132 aaKnown RBP12.94□□□□□ -0.34
TRAPPC10-211ENST00000485621 PURBQ96QR8 312 aaKnown RBP12.94□□□□□ -0.34
TRAPPC10-211ENST00000485621 ERFEQ4G0M1 354 aa12.92□□□□□ -0.34
TRAPPC10-211ENST00000485621 TRMT44Q8IYL2 757 aaKnown RBP12.92□□□□□ -0.34
TRAPPC10-211ENST00000485621 ARHGAP9Q9BRR9 750 aa12.92□□□□□ -0.34
TRAPPC10-211ENST00000485621 PDXDC2PQ6P474 469 aa12.91□□□□□ -0.34
TRAPPC10-211ENST00000485621 MAP4K5Q9Y4K4 846 aa12.91□□□□□ -0.34
TRAPPC10-211ENST00000485621 IL27Q8NEV9 243 aa12.9□□□□□ -0.34
TRAPPC10-211ENST00000485621 USP17L8P0C7I0 530 aa12.89□□□□□ -0.35
TRAPPC10-211ENST00000485621 RFC5P40937 340 aa12.89□□□□□ -0.35
TRAPPC10-211ENST00000485621 C6orf118Q5T5N4 469 aa12.89□□□□□ -0.35
TRAPPC10-211ENST00000485621 ZBTB33Q86T24 672 aa12.89□□□□□ -0.35
TRAPPC10-211ENST00000485621 PCMTD1Q96MG8 357 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC10-211ENST00000485621 EPS8L1Q8TE68 723 aa12.88□□□□□ -0.35
TRAPPC10-211ENST00000485621 CCDC116Q8IYX3 515 aa12.87□□□□□ -0.35
TRAPPC10-211ENST00000485621 SLC10A4Q96EP9 437 aa12.87□□□□□ -0.35
TRAPPC10-211ENST00000485621 HMX1Q9NP08 348 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC10-211ENST00000485621 NXF1Q9UBU9 619 aaKnown RBP12.87□□□□□ -0.35
TRAPPC10-211ENST00000485621 ZC3H4Q9UPT8 1303 aaKnown RBP12.87□□□□□ -0.35
TRAPPC10-211ENST00000485621 SOBPA7XYQ1 873 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms