RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 CCDC61Q9Y6R9 512 aa37.08■■■■□ 3.53
HLA-F-227ENST00000485513 COL14A1Q05707 1796 aaKnown RBP37.08■■■■□ 3.53
HLA-F-227ENST00000485513 CCDC125Q86Z20 511 aa37.07■■■■□ 3.52
HLA-F-227ENST00000485513 BRWD3Q6RI45 1802 aa37.07■■■■□ 3.52
HLA-F-227ENST00000485513 NRAPQ86VF7 1730 aa37.06■■■■□ 3.52
HLA-F-227ENST00000485513 SEPT12Q8IYM1 358 aa37.06■■■■□ 3.52
HLA-F-227ENST00000485513 BTG4Q9NY30 223 aa37.06■■■■□ 3.52
HLA-F-227ENST00000485513 CENPJQ9HC77 1338 aaPredicted RBP37.06■■■■□ 3.52
HLA-F-227ENST00000485513 POLR3AO14802 1390 aaPredicted RBP37.05■■■■□ 3.52
HLA-F-227ENST00000485513 ACEP12821 1306 aa37.04■■■■□ 3.52
HLA-F-227ENST00000485513 ONECUT3O60422 494 aaPredicted RBP37.03■■■■□ 3.52
HLA-F-227ENST00000485513 SIN3AQ96ST3 1273 aa37.03■■■■□ 3.52
HLA-F-227ENST00000485513 PLEKHG3A1L390 1219 aa37.02■■■■□ 3.52
HLA-F-227ENST00000485513 NBPF8Q3BBV2 869 aa37.01■■■■□ 3.52
HLA-F-227ENST00000485513 SRPK2P78362 688 aaKnown RBP36.99■■■■□ 3.51
HLA-F-227ENST00000485513 PRDM11Q9NQV5 511 aa36.99■■■■□ 3.51
HLA-F-227ENST00000485513 QRICH2Q9H0J4 1663 aa36.98■■■■□ 3.51
HLA-F-227ENST00000485513 NEUROD1Q13562 356 aa36.97■■■■□ 3.51
HLA-F-227ENST00000485513 PHRF1Q9P1Y6 1649 aaKnown RBP36.96■■■■□ 3.51
HLA-F-227ENST00000485513 NUTM2GQ5VZR2 741 aa36.95■■■■□ 3.51
HLA-F-227ENST00000485513 A0A0G2JS52 829 aa36.94■■■■□ 3.5
HLA-F-227ENST00000485513 MYT1Q01538 1121 aa36.94■■■■□ 3.5
HLA-F-227ENST00000485513 TRPM1Q7Z4N2 1603 aa36.94■■■■□ 3.5
HLA-F-227ENST00000485513 BLMP54132 1417 aaPredicted RBP36.93■■■■□ 3.5
HLA-F-227ENST00000485513 PPIP5K1Q6PFW1 1433 aa36.93■■■■□ 3.5
HLA-F-227ENST00000485513 KRT27Q7Z3Y8 459 aa36.93■■■■□ 3.5
HLA-F-227ENST00000485513 CABP2Q9NPB3 220 aa36.93■■■■□ 3.5
HLA-F-227ENST00000485513 KIAA0232Q92628 1395 aa36.92■■■■□ 3.5
HLA-F-227ENST00000485513 FAM98CQ17RN3 349 aaKnown RBP36.92■■■■□ 3.5
HLA-F-227ENST00000485513 ABTB2Q8N961 1025 aa36.89■■■■□ 3.5
HLA-F-227ENST00000485513 SPATA31A5Q5VU36 1347 aa36.88■■■■□ 3.49
HLA-F-227ENST00000485513 SPATA31A7Q8IWB4 1347 aa36.88■■■■□ 3.49
HLA-F-227ENST00000485513 ZC3H6P61129 1189 aaKnown RBP36.88■■■■□ 3.49
HLA-F-227ENST00000485513 CHRNA2Q15822 529 aa36.88■■■■□ 3.49
HLA-F-227ENST00000485513 ZRANB1Q9UGI0 708 aa36.86■■■■□ 3.49
HLA-F-227ENST00000485513 ROCK2O75116 1388 aaKnown RBP36.85■■■■□ 3.49
HLA-F-227ENST00000485513 SF3B2Q13435 895 aaKnown RBP36.84■■■■□ 3.49
HLA-F-227ENST00000485513 NRKQ7Z2Y5 1582 aa36.82■■■■□ 3.48
HLA-F-227ENST00000485513 CABP1Q9NZU7 370 aa36.81■■■■□ 3.48
HLA-F-227ENST00000485513 USP19O94966 1318 aa36.81■■■■□ 3.48
HLA-F-227ENST00000485513 EVC2Q86UK5 1308 aa36.81■■■■□ 3.48
HLA-F-227ENST00000485513 BRD4O60885 1362 aaPredicted RBP36.8■■■■□ 3.48
HLA-F-227ENST00000485513 STRN4Q9NRL3 753 aa36.8■■■■□ 3.48
HLA-F-227ENST00000485513 NLRP13Q86W25 1043 aa36.79■■■■□ 3.48
HLA-F-227ENST00000485513 DEFB132Q7Z7B7 95 aa36.78■■■■□ 3.48
HLA-F-227ENST00000485513 THSD7AQ9UPZ6 1657 aa36.77■■■■□ 3.48
HLA-F-227ENST00000485513 SPATA31A1Q5TZJ5 1347 aa36.77■■■■□ 3.48
HLA-F-227ENST00000485513 USP6P35125 1406 aa36.76■■■■□ 3.47
HLA-F-227ENST00000485513 CPDO75976 1380 aa36.75■■■■□ 3.47
HLA-F-227ENST00000485513 EVA1CP58658 441 aa36.73■■■■□ 3.47
HLA-F-227ENST00000485513 GCP02774 474 aa36.72■■■■□ 3.47
HLA-F-227ENST00000485513 CAMTA1Q9Y6Y1 1673 aa36.7■■■■□ 3.47
HLA-F-227ENST00000485513 SSH2Q76I76 1423 aa36.7■■■■□ 3.47
HLA-F-227ENST00000485513 LMO7Q8WWI1 1683 aa36.69■■■■□ 3.46
HLA-F-227ENST00000485513 FAM182BQ5T319 152 aa36.68■■■■□ 3.46
HLA-F-227ENST00000485513 NLRP6P59044 892 aa36.67■■■■□ 3.46
HLA-F-227ENST00000485513 USP35Q9P2H5 1018 aa36.67■■■■□ 3.46
HLA-F-227ENST00000485513 BAG6P46379 1132 aa36.65■■■■□ 3.46
HLA-F-227ENST00000485513 SRCAPQ6ZRS2 3230 aa36.65■■■■□ 3.46
HLA-F-227ENST00000485513 LARP1Q6PKG0 1096 aaKnown RBP36.64■■■■□ 3.46
HLA-F-227ENST00000485513 RGPD1P0DJD0 1748 aa36.62■■■■□ 3.45
HLA-F-227ENST00000485513 ZNF692Q9BU19 519 aaPredicted RBP36.62■■■■□ 3.45
HLA-F-227ENST00000485513 PIK3C2AO00443 1686 aa36.61■■■■□ 3.45
HLA-F-227ENST00000485513 SLIT3O75094 1523 aa36.61■■■■□ 3.45
HLA-F-227ENST00000485513 BARGINQ6ZT62 677 aa36.61■■■■□ 3.45
HLA-F-227ENST00000485513 TONSLQ96HA7 1378 aa36.61■■■■□ 3.45
HLA-F-227ENST00000485513 CARD11Q9BXL7 1154 aa36.6■■■■□ 3.45
HLA-F-227ENST00000485513 AKAP12Q02952 1782 aa36.6■■■■□ 3.45
HLA-F-227ENST00000485513 ZBTB7CA1YPR0 619 aa36.58■■■■□ 3.45
HLA-F-227ENST00000485513 TCP11L2Q8N4U5 519 aa36.58■■■■□ 3.45
HLA-F-227ENST00000485513 COL5A2P05997 1499 aaPredicted RBP36.57■■■■□ 3.45
HLA-F-227ENST00000485513 SBNO2Q9Y2G9 1366 aa36.57■■■■□ 3.45
HLA-F-227ENST00000485513 TTC21BQ7Z4L5 1316 aa36.57■■■■□ 3.44
HLA-F-227ENST00000485513 AATKQ6ZMQ8 1374 aa36.54■■■■□ 3.44
HLA-F-227ENST00000485513 FAM196AQ6ZSG2 479 aa36.54■■■■□ 3.44
HLA-F-227ENST00000485513 THRAP3Q9Y2W1 955 aaKnown RBP36.54■■■■□ 3.44
HLA-F-227ENST00000485513 CPSF1Q10570 1443 aaKnown RBP36.53■■■■□ 3.44
HLA-F-227ENST00000485513 TNS1Q9HBL0 1735 aaKnown RBP36.52■■■■□ 3.44
HLA-F-227ENST00000485513 EN1Q05925 392 aaPredicted RBP36.52■■■■□ 3.44
HLA-F-227ENST00000485513 PDE3BQ13370 1112 aa36.52■■■■□ 3.44
HLA-F-227ENST00000485513 TTC21AQ8NDW8 1320 aa36.52■■■■□ 3.44
HLA-F-227ENST00000485513 KTN1Q86UP2 1357 aaKnown RBP36.51■■■■□ 3.43
HLA-F-227ENST00000485513 CRB1P82279 1406 aa36.5■■■■□ 3.43
HLA-F-227ENST00000485513 DISP2A7MBM2 1401 aa36.49■■■■□ 3.43
HLA-F-227ENST00000485513 TRIM26Q12899 539 aaPredicted RBP36.48■■■■□ 3.43
HLA-F-227ENST00000485513 TRIM37O94972 964 aa36.47■■■■□ 3.43
HLA-F-227ENST00000485513 KCNH5Q8NCM2 988 aa36.47■■■■□ 3.43
HLA-F-227ENST00000485513 COL18A1P39060 1754 aa36.47■■■■□ 3.43
HLA-F-227ENST00000485513 MON2Q7Z3U7 1717 aa36.45■■■■□ 3.43
HLA-F-227ENST00000485513 PARP4Q9UKK3 1724 aaKnown RBP36.44■■■■□ 3.42
HLA-F-227ENST00000485513 ARHGEF25Q86VW2 580 aa36.43■■■■□ 3.42
HLA-F-227ENST00000485513 SOX12O15370 315 aa36.42■■■■□ 3.42
HLA-F-227ENST00000485513 AXIN2Q9Y2T1 843 aa36.41■■■■□ 3.42
HLA-F-227ENST00000485513 TOM1L2Q6ZVM7 507 aa36.4■■■■□ 3.42
HLA-F-227ENST00000485513 PSDA5PKW4 1024 aaPredicted RBP36.39■■■■□ 3.42
HLA-F-227ENST00000485513 TMC1Q8TDI8 760 aa36.39■■■■□ 3.42
HLA-F-227ENST00000485513 EZH2Q15910 746 aaKnown RBP36.38■■■■□ 3.41
HLA-F-227ENST00000485513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.38■■■■□ 3.41
HLA-F-227ENST00000485513 CD163L1Q9NR16 1453 aa36.37■■■■□ 3.41
HLA-F-227ENST00000485513 WDR17Q8IZU2 1322 aa36.37■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms