RNA–Protein interactions for RNA: ENST00000485439.5

RPL35A-208, Transcript of ribosomal protein L35a, human

TSL 2

Gene RPL35A, Length 677 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL35A-208	ENST00000485439	UNC5CL	Q8IV45	518 aa		11.21	□□□□□ -0.61
RPL35A-208	ENST00000485439	NUDT16	Q96DE0	195 aa	Known RBP	11.21	□□□□□ -0.61
RPL35A-208	ENST00000485439	SIN3A	Q96ST3	1273 aa		11.21	□□□□□ -0.61
RPL35A-208	ENST00000485439	CDK19	Q9BWU1	502 aa		11.21	□□□□□ -0.61
RPL35A-208	ENST00000485439	AKAP12	Q02952	1782 aa		11.21	□□□□□ -0.62
RPL35A-208	ENST00000485439	PLEKHG5	O94827	1062 aa		11.2	□□□□□ -0.62
RPL35A-208	ENST00000485439	PPIP5K1	Q6PFW1	1433 aa		11.19	□□□□□ -0.62
RPL35A-208	ENST00000485439	ROCK2	O75116	1388 aa	Known RBP	11.19	□□□□□ -0.62
RPL35A-208	ENST00000485439	GJD4	Q96KN9	370 aa	Predicted RBP	11.19	□□□□□ -0.62
RPL35A-208	ENST00000485439	PAK3	O75914	559 aa	Predicted RBP	11.18	□□□□□ -0.62
RPL35A-208	ENST00000485439	NEUROD1	Q13562	356 aa		11.18	□□□□□ -0.62
RPL35A-208	ENST00000485439	CCDC61	Q9Y6R9	512 aa		11.18	□□□□□ -0.62
RPL35A-208	ENST00000485439	SRCAP	Q6ZRS2	3230 aa		11.18	□□□□□ -0.62
RPL35A-208	ENST00000485439	SRPK2	P78362	688 aa	Known RBP	11.17	□□□□□ -0.62
RPL35A-208	ENST00000485439	PIK3C2A	O00443	1686 aa		11.17	□□□□□ -0.62
RPL35A-208	ENST00000485439	ACE	P12821	1306 aa		11.16	□□□□□ -0.62
RPL35A-208	ENST00000485439	MON2	Q7Z3U7	1717 aa		11.16	□□□□□ -0.62
RPL35A-208	ENST00000485439	PLEKHG3	A1L390	1219 aa		11.16	□□□□□ -0.62
RPL35A-208	ENST00000485439	VPS72	Q15906	364 aa		11.16	□□□□□ -0.62
RPL35A-208	ENST00000485439	LMO7	Q8WWI1	1683 aa		11.16	□□□□□ -0.62
RPL35A-208	ENST00000485439	THSD7A	Q9UPZ6	1657 aa		11.16	□□□□□ -0.62
RPL35A-208	ENST00000485439	TONSL	Q96HA7	1378 aa		11.15	□□□□□ -0.63
RPL35A-208	ENST00000485439	FAM83G	A6ND36	823 aa		11.14	□□□□□ -0.63
RPL35A-208	ENST00000485439	NBPF8	Q3BBV2	869 aa		11.14	□□□□□ -0.63
RPL35A-208	ENST00000485439	CABP2	Q9NPB3	220 aa		11.14	□□□□□ -0.63
RPL35A-208	ENST00000485439	CCDC9	Q9Y3X0	531 aa	Known RBP	11.14	□□□□□ -0.63
RPL35A-208	ENST00000485439	USP6	P35125	1406 aa		11.14	□□□□□ -0.63
RPL35A-208	ENST00000485439	BRD4	O60885	1362 aa	Predicted RBP	11.14	□□□□□ -0.63
RPL35A-208	ENST00000485439	KIAA0232	Q92628	1395 aa		11.14	□□□□□ -0.63
RPL35A-208	ENST00000485439	EVC2	Q86UK5	1308 aa		11.13	□□□□□ -0.63
RPL35A-208	ENST00000485439	TRIM26	Q12899	539 aa	Predicted RBP	11.13	□□□□□ -0.63
RPL35A-208	ENST00000485439	PRDM11	Q9NQV5	511 aa		11.13	□□□□□ -0.63
RPL35A-208	ENST00000485439	BTG4	Q9NY30	223 aa		11.13	□□□□□ -0.63
RPL35A-208	ENST00000485439	SLIT3	O75094	1523 aa		11.13	□□□□□ -0.63
RPL35A-208	ENST00000485439	SBNO2	Q9Y2G9	1366 aa		11.13	□□□□□ -0.63
RPL35A-208	ENST00000485439	RGPD1	P0DJD0	1748 aa		11.12	□□□□□ -0.63
RPL35A-208	ENST00000485439	USP19	O94966	1318 aa		11.12	□□□□□ -0.63
RPL35A-208	ENST00000485439	WNK3	Q9BYP7	1800 aa		11.12	□□□□□ -0.63
RPL35A-208	ENST00000485439	USP54	Q70EL1	1684 aa		11.11	□□□□□ -0.63
RPL35A-208	ENST00000485439	NUTM2G	Q5VZR2	741 aa		11.11	□□□□□ -0.63
RPL35A-208	ENST00000485439	SEPT12	Q8IYM1	358 aa		11.11	□□□□□ -0.63
RPL35A-208	ENST00000485439	CPD	O75976	1380 aa		11.11	□□□□□ -0.63
RPL35A-208	ENST00000485439	BLM	P54132	1417 aa	Predicted RBP	11.1	□□□□□ -0.63
RPL35A-208	ENST00000485439	SSH2	Q76I76	1423 aa		11.1	□□□□□ -0.63
RPL35A-208	ENST00000485439	TNS1	Q9HBL0	1735 aa	Known RBP	11.1	□□□□□ -0.63
RPL35A-208	ENST00000485439	ABTB2	Q8N961	1025 aa		11.1	□□□□□ -0.63
RPL35A-208	ENST00000485439	SPATA31A5	Q5VU36	1347 aa		11.09	□□□□□ -0.63
RPL35A-208	ENST00000485439	SPATA31A7	Q8IWB4	1347 aa		11.09	□□□□□ -0.63
RPL35A-208	ENST00000485439	COL18A1	P39060	1754 aa		11.09	□□□□□ -0.63
RPL35A-208	ENST00000485439	RGPD5	Q99666	1765 aa		11.09	□□□□□ -0.63
RPL35A-208	ENST00000485439	CAMTA1	Q9Y6Y1	1673 aa		11.09	□□□□□ -0.63
RPL35A-208	ENST00000485439		A0A0G2JS52	829 aa		11.09	□□□□□ -0.63
RPL35A-208	ENST00000485439	ONECUT3	O60422	494 aa	Predicted RBP	11.09	□□□□□ -0.63
RPL35A-208	ENST00000485439	MYT1	Q01538	1121 aa		11.09	□□□□□ -0.63
RPL35A-208	ENST00000485439	CABP1	Q9NZU7	370 aa		11.09	□□□□□ -0.63
RPL35A-208	ENST00000485439	PARP4	Q9UKK3	1724 aa	Known RBP	11.09	□□□□□ -0.63
RPL35A-208	ENST00000485439	ZC3H6	P61129	1189 aa	Known RBP	11.08	□□□□□ -0.64
RPL35A-208	ENST00000485439	CHRNA2	Q15822	529 aa		11.08	□□□□□ -0.64
RPL35A-208	ENST00000485439	FAM98C	Q17RN3	349 aa	Known RBP	11.08	□□□□□ -0.64
RPL35A-208	ENST00000485439	NLRP13	Q86W25	1043 aa		11.08	□□□□□ -0.64
RPL35A-208	ENST00000485439	CCDC125	Q86Z20	511 aa		11.08	□□□□□ -0.64
RPL35A-208	ENST00000485439	CARD11	Q9BXL7	1154 aa		11.08	□□□□□ -0.64
RPL35A-208	ENST00000485439	LTN1	O94822	1766 aa		11.08	□□□□□ -0.64
RPL35A-208	ENST00000485439	COL5A2	P05997	1499 aa	Predicted RBP	11.07	□□□□□ -0.64
RPL35A-208	ENST00000485439	KRT27	Q7Z3Y8	459 aa		11.07	□□□□□ -0.64
RPL35A-208	ENST00000485439	CPSF1	Q10570	1443 aa	Known RBP	11.07	□□□□□ -0.64
RPL35A-208	ENST00000485439	SPATA31A1	Q5TZJ5	1347 aa		11.07	□□□□□ -0.64
RPL35A-208	ENST00000485439	NFAT5	O94916	1531 aa		11.06	□□□□□ -0.64
RPL35A-208	ENST00000485439	ABCC6	O95255	1503 aa		11.06	□□□□□ -0.64
RPL35A-208	ENST00000485439	STRN4	Q9NRL3	753 aa		11.05	□□□□□ -0.64
RPL35A-208	ENST00000485439	LRRC37A3	O60309	1634 aa		11.05	□□□□□ -0.64
RPL35A-208	ENST00000485439	CD163L1	Q9NR16	1453 aa		11.05	□□□□□ -0.64
RPL35A-208	ENST00000485439	TTC21A	Q8NDW8	1320 aa		11.05	□□□□□ -0.64
RPL35A-208	ENST00000485439	KTN1	Q86UP2	1357 aa	Known RBP	11.04	□□□□□ -0.64
RPL35A-208	ENST00000485439	GC	P02774	474 aa		11.04	□□□□□ -0.64
RPL35A-208	ENST00000485439	NLRP6	P59044	892 aa		11.04	□□□□□ -0.64
RPL35A-208	ENST00000485439	ZNF692	Q9BU19	519 aa	Predicted RBP	11.04	□□□□□ -0.64
RPL35A-208	ENST00000485439	TTC21B	Q7Z4L5	1316 aa		11.04	□□□□□ -0.64
RPL35A-208	ENST00000485439	AATK	Q6ZMQ8	1374 aa		11.03	□□□□□ -0.64
RPL35A-208	ENST00000485439	SF3B2	Q13435	895 aa	Known RBP	11.03	□□□□□ -0.64
RPL35A-208	ENST00000485439	SBF2	Q86WG5	1849 aa		11.02	□□□□□ -0.64
RPL35A-208	ENST00000485439	EVA1C	P58658	441 aa		11.02	□□□□□ -0.65
RPL35A-208	ENST00000485439	LARP1	Q6PKG0	1096 aa	Known RBP	11.02	□□□□□ -0.65
RPL35A-208	ENST00000485439	CRB1	P82279	1406 aa		11.01	□□□□□ -0.65
RPL35A-208	ENST00000485439	EDC4	Q6P2E9	1401 aa	Known RBP	11.01	□□□□□ -0.65
RPL35A-208	ENST00000485439	BARGIN	Q6ZT62	677 aa		11.01	□□□□□ -0.65
RPL35A-208	ENST00000485439	USP35	Q9P2H5	1018 aa		11.01	□□□□□ -0.65
RPL35A-208	ENST00000485439	RREB1	Q92766	1687 aa		11.01	□□□□□ -0.65
RPL35A-208	ENST00000485439	FAM208A	Q9UK61	1670 aa	Known RBP	11.01	□□□□□ -0.65
RPL35A-208	ENST00000485439	NINL	Q9Y2I6	1382 aa		11.01	□□□□□ -0.65
RPL35A-208	ENST00000485439	PEAK1	Q9H792	1746 aa		11.01	□□□□□ -0.65
RPL35A-208	ENST00000485439	DISP2	A7MBM2	1401 aa		11.01	□□□□□ -0.65
RPL35A-208	ENST00000485439	KIF20B	Q96Q89	1820 aa		11	□□□□□ -0.65
RPL35A-208	ENST00000485439	ZBTB7C	A1YPR0	619 aa		11	□□□□□ -0.65
RPL35A-208	ENST00000485439	DEFB132	Q7Z7B7	95 aa		11	□□□□□ -0.65
RPL35A-208	ENST00000485439	TCP11L2	Q8N4U5	519 aa		11	□□□□□ -0.65
RPL35A-208	ENST00000485439	KCNH5	Q8NCM2	988 aa		11	□□□□□ -0.65
RPL35A-208	ENST00000485439	ZRANB1	Q9UGI0	708 aa		11	□□□□□ -0.65
RPL35A-208	ENST00000485439		A0A1W2PP64	1363 aa		11	□□□□□ -0.65
RPL35A-208	ENST00000485439	USP47	Q96K76	1375 aa		11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms