RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 CCDC61Q9Y6R9 512 aa15.12■□□□□ 0.01
DDX56-212ENST00000485367 ROCK2O75116 1388 aaKnown RBP15.12■□□□□ 0.01
DDX56-212ENST00000485367 ALS2Q96Q42 1657 aa15.12■□□□□ 0.01
DDX56-212ENST00000485367 UNC5CLQ8IV45 518 aa15.11■□□□□ 0.01
DDX56-212ENST00000485367 TOPAZ1Q8N9V7 1692 aa15.11■□□□□ 0.01
DDX56-212ENST00000485367 NBPF8Q3BBV2 869 aa15.11■□□□□ 0.01
DDX56-212ENST00000485367 UPF1Q92900 1129 aaKnown RBP eCLIP15.11■□□□□ 0.01
DDX56-212ENST00000485367 CABP2Q9NPB3 220 aa15.11■□□□□ 0.01
DDX56-212ENST00000485367 SLIT2O94813 1529 aa15.1■□□□□ 0.01
DDX56-212ENST00000485367 ACEP12821 1306 aa15.1■□□□□ 0.01
DDX56-212ENST00000485367 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.09■□□□□ 0.01
DDX56-212ENST00000485367 TONSLQ96HA7 1378 aa15.09■□□□□ 0.01
DDX56-212ENST00000485367 PLEKHG3A1L390 1219 aa15.09■□□□□ 0.01
DDX56-212ENST00000485367 GJD4Q96KN9 370 aaPredicted RBP15.09■□□□□ 0.01
DDX56-212ENST00000485367 FAM83GA6ND36 823 aa15.08■□□□□ 0.01
DDX56-212ENST00000485367 PLCH1Q4KWH8 1693 aa15.08■□□□□ 0
DDX56-212ENST00000485367 POLR3AO14802 1390 aaPredicted RBP15.08■□□□□ 0
DDX56-212ENST00000485367 PPIP5K1Q6PFW1 1433 aa15.07■□□□□ 0
DDX56-212ENST00000485367 NUTM2GQ5VZR2 741 aa15.07■□□□□ 0
DDX56-212ENST00000485367 NWD2Q9ULI1 1742 aa15.06■□□□□ 0
DDX56-212ENST00000485367 EVC2Q86UK5 1308 aa15.06■□□□□ 0
DDX56-212ENST00000485367 RALGAPBQ86X10 1494 aa15.06■□□□□ 0
DDX56-212ENST00000485367 CCDC9Q9Y3X0 531 aaKnown RBP15.06■□□□□ 0
DDX56-212ENST00000485367 VPS72Q15906 364 aa15.04■□□□□ -0
DDX56-212ENST00000485367 CARD11Q9BXL7 1154 aa15.04■□□□□ -0
DDX56-212ENST00000485367 BTG4Q9NY30 223 aa15.04■□□□□ -0
DDX56-212ENST00000485367 CABP1Q9NZU7 370 aa15.04■□□□□ -0
DDX56-212ENST00000485367 CRYBG1Q9Y4K1 1723 aa15.04■□□□□ -0
DDX56-212ENST00000485367 GLI3P10071 1580 aa15.04■□□□□ -0
DDX56-212ENST00000485367 ABTB2Q8N961 1025 aa15.03■□□□□ -0
DDX56-212ENST00000485367 ATAD2Q6PL18 1390 aa15.03■□□□□ -0
DDX56-212ENST00000485367 COL14A1Q05707 1796 aaKnown RBP15.03■□□□□ -0
DDX56-212ENST00000485367 MIER1Q8N108 512 aa15.03■□□□□ -0
DDX56-212ENST00000485367 PRDM11Q9NQV5 511 aa15.03■□□□□ -0
DDX56-212ENST00000485367 BCL11AQ9H165 835 aa15.02□□□□□ -0.01
DDX56-212ENST00000485367 PHRF1Q9P1Y6 1649 aaKnown RBP15.01□□□□□ -0.01
DDX56-212ENST00000485367 ZC3H6P61129 1189 aaKnown RBP15.01□□□□□ -0.01
DDX56-212ENST00000485367 NRAPQ86VF7 1730 aa15□□□□□ -0.01
DDX56-212ENST00000485367 KIAA0232Q92628 1395 aa15□□□□□ -0.01
DDX56-212ENST00000485367 CHRNA2Q15822 529 aa14.99□□□□□ -0.01
DDX56-212ENST00000485367 SEPT12Q8IYM1 358 aa14.99□□□□□ -0.01
DDX56-212ENST00000485367 BRWD3Q6RI45 1802 aa14.98□□□□□ -0.01
DDX56-212ENST00000485367 NLRP13Q86W25 1043 aa14.98□□□□□ -0.01
DDX56-212ENST00000485367 YTHDC1Q96MU7 727 aaKnown RBP14.98□□□□□ -0.01
DDX56-212ENST00000485367 USP6P35125 1406 aa14.98□□□□□ -0.01
DDX56-212ENST00000485367 BRD4O60885 1362 aaPredicted RBP14.98□□□□□ -0.01
DDX56-212ENST00000485367 A0A0G2JS52 829 aa14.98□□□□□ -0.01
DDX56-212ENST00000485367 ONECUT3O60422 494 aaPredicted RBP14.96□□□□□ -0.01
DDX56-212ENST00000485367 FAM98CQ17RN3 349 aaKnown RBP14.96□□□□□ -0.01
DDX56-212ENST00000485367 USP19O94966 1318 aa14.96□□□□□ -0.01
DDX56-212ENST00000485367 NLRP6P59044 892 aa14.96□□□□□ -0.02
DDX56-212ENST00000485367 STRN4Q9NRL3 753 aa14.96□□□□□ -0.02
DDX56-212ENST00000485367 SBNO2Q9Y2G9 1366 aa14.95□□□□□ -0.02
DDX56-212ENST00000485367 NRKQ7Z2Y5 1582 aa14.95□□□□□ -0.02
DDX56-212ENST00000485367 GCP02774 474 aa14.95□□□□□ -0.02
DDX56-212ENST00000485367 ZNF692Q9BU19 519 aaPredicted RBP14.95□□□□□ -0.02
DDX56-212ENST00000485367 SPATA31A5Q5VU36 1347 aa14.94□□□□□ -0.02
DDX56-212ENST00000485367 SPATA31A7Q8IWB4 1347 aa14.94□□□□□ -0.02
DDX56-212ENST00000485367 AKAP12Q02952 1782 aa14.94□□□□□ -0.02
DDX56-212ENST00000485367 EVA1CP58658 441 aa14.94□□□□□ -0.02
DDX56-212ENST00000485367 ZBTB7CA1YPR0 619 aa14.93□□□□□ -0.02
DDX56-212ENST00000485367 KRT27Q7Z3Y8 459 aa14.93□□□□□ -0.02
DDX56-212ENST00000485367 SSH2Q76I76 1423 aa14.93□□□□□ -0.02
DDX56-212ENST00000485367 CPDO75976 1380 aa14.93□□□□□ -0.02
DDX56-212ENST00000485367 TMC1Q8TDI8 760 aa14.93□□□□□ -0.02
DDX56-212ENST00000485367 EP400Q96L91 3159 aa14.92□□□□□ -0.02
DDX56-212ENST00000485367 TTC21BQ7Z4L5 1316 aa14.92□□□□□ -0.02
DDX56-212ENST00000485367 KTN1Q86UP2 1357 aaKnown RBP14.92□□□□□ -0.02
DDX56-212ENST00000485367 CCDC125Q86Z20 511 aa14.92□□□□□ -0.02
DDX56-212ENST00000485367 PIK3C2AO00443 1686 aa14.92□□□□□ -0.02
DDX56-212ENST00000485367 SPATA31A1Q5TZJ5 1347 aa14.91□□□□□ -0.02
DDX56-212ENST00000485367 CAMTA1Q9Y6Y1 1673 aa14.91□□□□□ -0.02
DDX56-212ENST00000485367 ST20-MTHFSA0A0A6YYL1 179 aa14.9□□□□□ -0.02
DDX56-212ENST00000485367 CPSF1Q10570 1443 aaKnown RBP14.9□□□□□ -0.02
DDX56-212ENST00000485367 USP35Q9P2H5 1018 aa14.9□□□□□ -0.02
DDX56-212ENST00000485367 TTC21AQ8NDW8 1320 aa14.9□□□□□ -0.02
DDX56-212ENST00000485367 SLIT3O75094 1523 aa14.89□□□□□ -0.03
DDX56-212ENST00000485367 LARP1Q6PKG0 1096 aaKnown RBP14.89□□□□□ -0.03
DDX56-212ENST00000485367 SLC12A5Q9H2X9 1139 aa14.89□□□□□ -0.03
DDX56-212ENST00000485367 LMO7Q8WWI1 1683 aa14.89□□□□□ -0.03
DDX56-212ENST00000485367 SOX12O15370 315 aa14.88□□□□□ -0.03
DDX56-212ENST00000485367 MON2Q7Z3U7 1717 aa14.88□□□□□ -0.03
DDX56-212ENST00000485367 BLMP54132 1417 aaPredicted RBP14.88□□□□□ -0.03
DDX56-212ENST00000485367 HDGFL2Q7Z4V5 671 aaPredicted RBP14.88□□□□□ -0.03
DDX56-212ENST00000485367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.88□□□□□ -0.03
DDX56-212ENST00000485367 TESK2Q96S53 571 aa14.88□□□□□ -0.03
DDX56-212ENST00000485367 SF3B2Q13435 895 aaKnown RBP14.87□□□□□ -0.03
DDX56-212ENST00000485367 THSD7AQ9UPZ6 1657 aa14.87□□□□□ -0.03
DDX56-212ENST00000485367 FAM182BQ5T319 152 aa14.86□□□□□ -0.03
DDX56-212ENST00000485367 KCNH5Q8NCM2 988 aa14.86□□□□□ -0.03
DDX56-212ENST00000485367 PUS7Q96PZ0 661 aaKnown RBP14.86□□□□□ -0.03
DDX56-212ENST00000485367 AATKQ6ZMQ8 1374 aa14.86□□□□□ -0.03
DDX56-212ENST00000485367 CD163L1Q9NR16 1453 aa14.86□□□□□ -0.03
DDX56-212ENST00000485367 TERF2IPQ9NYB0 399 aa14.85□□□□□ -0.03
DDX56-212ENST00000485367 ZRANB1Q9UGI0 708 aa14.85□□□□□ -0.03
DDX56-212ENST00000485367 SLC24A1O60721 1099 aa14.85□□□□□ -0.03
DDX56-212ENST00000485367 TCP11L2Q8N4U5 519 aa14.85□□□□□ -0.03
DDX56-212ENST00000485367 TIMELESSQ9UNS1 1208 aa14.85□□□□□ -0.03
DDX56-212ENST00000485367 USP47Q96K76 1375 aa14.85□□□□□ -0.03
DDX56-212ENST00000485367 COL5A2P05997 1499 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms