RNA–Protein interactions for RNA: ENST00000484933.6

LINC01140-206, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,368 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-206ENST00000484933 U2SURPO15042 1029 aaKnown RBP12.58□□□□□ -0.4
LINC01140-206ENST00000484933 FOXD4L5Q5VV16 416 aaPredicted RBP12.58□□□□□ -0.4
LINC01140-206ENST00000484933 FOXD4L4Q8WXT5 416 aaPredicted RBP12.58□□□□□ -0.4
LINC01140-206ENST00000484933 SLC12A5Q9H2X9 1139 aa12.58□□□□□ -0.4
LINC01140-206ENST00000484933 INSRP06213 1382 aa12.58□□□□□ -0.4
LINC01140-206ENST00000484933 NOL7Q9UMY1 257 aaKnown RBP12.57□□□□□ -0.4
LINC01140-206ENST00000484933 CDC42BPBQ9Y5S2 1711 aa12.57□□□□□ -0.4
LINC01140-206ENST00000484933 SASS6Q6UVJ0 657 aa12.57□□□□□ -0.4
LINC01140-206ENST00000484933 SAFB2Q14151 953 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC01140-206ENST00000484933 ZNF771Q7L3S4 317 aaPredicted RBP12.56□□□□□ -0.4
LINC01140-206ENST00000484933 RBSNQ9H1K0 784 aa12.56□□□□□ -0.4
LINC01140-206ENST00000484933 STAG3Q9UJ98 1225 aa12.56□□□□□ -0.4
LINC01140-206ENST00000484933 NLRP1Q9C000 1473 aa12.56□□□□□ -0.4
LINC01140-206ENST00000484933 SHANK2Q9UPX8 1470 aa12.56□□□□□ -0.4
LINC01140-206ENST00000484933 PRDM15P57071 1507 aaPredicted RBP12.56□□□□□ -0.4
LINC01140-206ENST00000484933 ASXL1Q8IXJ9 1541 aa12.56□□□□□ -0.4
LINC01140-206ENST00000484933 MTHFSP49914 203 aa12.56□□□□□ -0.4
LINC01140-206ENST00000484933 LNPKQ9C0E8 428 aa12.56□□□□□ -0.4
LINC01140-206ENST00000484933 RBM27Q9P2N5 1060 aaKnown RBP12.56□□□□□ -0.4
LINC01140-206ENST00000484933 PRIM1P49642 420 aaKnown RBP12.56□□□□□ -0.4
LINC01140-206ENST00000484933 RUNDC1Q96C34 613 aa12.56□□□□□ -0.4
LINC01140-206ENST00000484933 RBM42Q9BTD8 480 aaKnown RBP12.56□□□□□ -0.4
LINC01140-206ENST00000484933 ZNF692Q9BU19 519 aaPredicted RBP12.56□□□□□ -0.4
LINC01140-206ENST00000484933 CFAP65Q6ZU64 1925 aaKnown RBP12.56□□□□□ -0.4
LINC01140-206ENST00000484933 TERF1P54274 439 aa12.55□□□□□ -0.4
LINC01140-206ENST00000484933 RSPH4AQ5TD94 716 aa12.55□□□□□ -0.4
LINC01140-206ENST00000484933 ZNF830Q96NB3 372 aaPredicted RBP12.55□□□□□ -0.4
LINC01140-206ENST00000484933 ATP2B3Q16720 1220 aa12.55□□□□□ -0.4
LINC01140-206ENST00000484933 CSPP1Q1MSJ5 1256 aa12.55□□□□□ -0.4
LINC01140-206ENST00000484933 DZIP1LQ8IYY4 767 aaKnown RBP12.55□□□□□ -0.4
LINC01140-206ENST00000484933 TMEM51Q9NW97 253 aa12.55□□□□□ -0.4
LINC01140-206ENST00000484933 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.55□□□□□ -0.4
LINC01140-206ENST00000484933 ZKSCAN5Q9Y2L8 839 aa12.55□□□□□ -0.4
LINC01140-206ENST00000484933 UTP14CQ5TAP6 766 aaKnown RBP12.55□□□□□ -0.4
LINC01140-206ENST00000484933 ZKSCAN2Q63HK3 967 aa12.55□□□□□ -0.4
LINC01140-206ENST00000484933 DIP2BQ9P265 1576 aa12.54□□□□□ -0.4
LINC01140-206ENST00000484933 C17orf53Q8N3J3 647 aaPredicted RBP12.54□□□□□ -0.4
LINC01140-206ENST00000484933 PIK3C2GO75747 1445 aa12.54□□□□□ -0.4
LINC01140-206ENST00000484933 CD2BP2O95400 341 aaKnown RBP12.53□□□□□ -0.4
LINC01140-206ENST00000484933 MVPQ14764 893 aaKnown RBP12.53□□□□□ -0.4
LINC01140-206ENST00000484933 CHAMP1Q96JM3 812 aa12.53□□□□□ -0.4
LINC01140-206ENST00000484933 MYO5CQ9NQX4 1742 aa12.53□□□□□ -0.4
LINC01140-206ENST00000484933 RAB3GAP1Q15042 981 aa12.53□□□□□ -0.4
LINC01140-206ENST00000484933 PLCB2Q00722 1185 aa12.53□□□□□ -0.4
LINC01140-206ENST00000484933 EXOSC9Q06265 439 aaKnown RBP12.53□□□□□ -0.4
LINC01140-206ENST00000484933 ZNF500O60304 480 aaPredicted RBP12.52□□□□□ -0.4
LINC01140-206ENST00000484933 ZSCAN23Q3MJ62 389 aa12.52□□□□□ -0.4
LINC01140-206ENST00000484933 TMEM132EQ6IEE7 984 aa12.52□□□□□ -0.4
LINC01140-206ENST00000484933 ADGRF5Q8IZF2 1346 aa12.52□□□□□ -0.41
LINC01140-206ENST00000484933 PRPF40AO75400 957 aaKnown RBP12.52□□□□□ -0.41
LINC01140-206ENST00000484933 CFAP53Q96M91 514 aa12.52□□□□□ -0.41
LINC01140-206ENST00000484933 SYCE3A1L190 88 aa12.51□□□□□ -0.41
LINC01140-206ENST00000484933 FOXD4L6Q3SYB3 417 aaPredicted RBP12.51□□□□□ -0.41
LINC01140-206ENST00000484933 FOXD4L3Q6VB84 417 aaPredicted RBP12.51□□□□□ -0.41
LINC01140-206ENST00000484933 KIF20AO95235 890 aa12.5□□□□□ -0.41
LINC01140-206ENST00000484933 BAG4O95429 457 aaKnown RBP12.5□□□□□ -0.41
LINC01140-206ENST00000484933 KLHL40Q2TBA0 621 aa12.5□□□□□ -0.41
LINC01140-206ENST00000484933 IPO4Q8TEX9 1081 aaKnown RBP12.5□□□□□ -0.41
LINC01140-206ENST00000484933 C1orf115Q9H7X2 142 aa12.5□□□□□ -0.41
LINC01140-206ENST00000484933 SCAF11Q99590 1463 aaKnown RBP12.5□□□□□ -0.41
LINC01140-206ENST00000484933 CERS3Q8IU89 383 aa12.5□□□□□ -0.41
LINC01140-206ENST00000484933 TRIM27P14373 513 aa12.49□□□□□ -0.41
LINC01140-206ENST00000484933 U2AF2P26368 475 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC01140-206ENST00000484933 GAS2L2Q8NHY3 880 aa12.49□□□□□ -0.41
LINC01140-206ENST00000484933 GTPBP4Q9BZE4 634 aaKnown RBP12.49□□□□□ -0.41
LINC01140-206ENST00000484933 NOB1Q9ULX3 412 aaKnown RBP12.49□□□□□ -0.41
LINC01140-206ENST00000484933 NSD3Q9BZ95 1437 aa12.49□□□□□ -0.41
LINC01140-206ENST00000484933 LETM1O95202 739 aaPredicted RBP12.49□□□□□ -0.41
LINC01140-206ENST00000484933 TAF7LQ5H9L4 462 aa12.49□□□□□ -0.41
LINC01140-206ENST00000484933 KIAA2012Q0VF49 1180 aa12.49□□□□□ -0.41
LINC01140-206ENST00000484933 SSH1Q8WYL5 1049 aa12.49□□□□□ -0.41
LINC01140-206ENST00000484933 TRERF1Q96PN7 1200 aa12.49□□□□□ -0.41
LINC01140-206ENST00000484933 PREX2Q70Z35 1606 aa12.48□□□□□ -0.41
LINC01140-206ENST00000484933 ELL2O00472 640 aaPredicted RBP12.48□□□□□ -0.41
LINC01140-206ENST00000484933 KCNJ4P48050 445 aa12.48□□□□□ -0.41
LINC01140-206ENST00000484933 ZNF710Q8N1W2 664 aa12.48□□□□□ -0.41
LINC01140-206ENST00000484933 TMEM57Q8N5G2 664 aa12.48□□□□□ -0.41
LINC01140-206ENST00000484933 ANKRD45Q5TZF3 282 aa12.48□□□□□ -0.41
LINC01140-206ENST00000484933 CCDC39Q9UFE4 941 aa12.48□□□□□ -0.41
LINC01140-206ENST00000484933 ABCA9Q8IUA7 1624 aa12.48□□□□□ -0.41
LINC01140-206ENST00000484933 AEBP1Q8IUX7 1158 aa12.47□□□□□ -0.41
LINC01140-206ENST00000484933 NINLQ9Y2I6 1382 aa12.47□□□□□ -0.41
LINC01140-206ENST00000484933 PKP1Q13835 747 aa12.47□□□□□ -0.41
LINC01140-206ENST00000484933 SMC5Q8IY18 1101 aa12.47□□□□□ -0.41
LINC01140-206ENST00000484933 PDCL2Q8N4E4 241 aa12.47□□□□□ -0.41
LINC01140-206ENST00000484933 POGZQ7Z3K3 1410 aa12.47□□□□□ -0.41
LINC01140-206ENST00000484933 ZNF518AQ6AHZ1 1483 aa12.46□□□□□ -0.41
LINC01140-206ENST00000484933 KIF3AQ9Y496 699 aa12.46□□□□□ -0.41
LINC01140-206ENST00000484933 WDR63Q8IWG1 891 aa12.46□□□□□ -0.41
LINC01140-206ENST00000484933 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.46□□□□□ -0.41
LINC01140-206ENST00000484933 K7ELQ4 463 aaPredicted RBP12.46□□□□□ -0.42
LINC01140-206ENST00000484933 PTMSP20962 102 aa12.46□□□□□ -0.42
LINC01140-206ENST00000484933 MYRIPQ8NFW9 859 aa12.46□□□□□ -0.42
LINC01140-206ENST00000484933 CIZ1Q9ULV3 898 aaPredicted RBP12.46□□□□□ -0.42
LINC01140-206ENST00000484933 EIF2AK4Q9P2K8 1649 aaKnown RBP12.46□□□□□ -0.42
LINC01140-206ENST00000484933 NGEFQ8N5V2 710 aa12.45□□□□□ -0.42
LINC01140-206ENST00000484933 TTC12Q9H892 705 aaPredicted RBP12.45□□□□□ -0.42
LINC01140-206ENST00000484933 ABCC1P33527 1531 aa12.45□□□□□ -0.42
LINC01140-206ENST00000484933 KIF13AQ9H1H9 1805 aa12.45□□□□□ -0.42
LINC01140-206ENST00000484933 APBB1O00213 710 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms