RNA–Protein interactions for RNA: ENST00000484683.1

RPRD1B-205, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-205ENST00000484683 COL22A1Q8NFW1 1626 aaPredicted RBP13.06□□□□□ -0.32
RPRD1B-205ENST00000484683 NLRP13Q86W25 1043 aa13.05□□□□□ -0.32
RPRD1B-205ENST00000484683 TRPM1Q7Z4N2 1603 aa13.04□□□□□ -0.32
RPRD1B-205ENST00000484683 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
RPRD1B-205ENST00000484683 PRDM11Q9NQV5 511 aa13.04□□□□□ -0.32
RPRD1B-205ENST00000484683 RALGAPBQ86X10 1494 aa13.04□□□□□ -0.32
RPRD1B-205ENST00000484683 CDK12Q9NYV4 1490 aaPredicted RBP13.04□□□□□ -0.32
RPRD1B-205ENST00000484683 USP32Q8NFA0 1604 aa13.03□□□□□ -0.32
RPRD1B-205ENST00000484683 NUTM2GQ5VZR2 741 aa13.03□□□□□ -0.32
RPRD1B-205ENST00000484683 TMC1Q8TDI8 760 aa13.03□□□□□ -0.32
RPRD1B-205ENST00000484683 RGPD8O14715 1765 aaPredicted RBP13.02□□□□□ -0.32
RPRD1B-205ENST00000484683 FAM83GA6ND36 823 aa13.02□□□□□ -0.33
RPRD1B-205ENST00000484683 SBNO2Q9Y2G9 1366 aa13.02□□□□□ -0.33
RPRD1B-205ENST00000484683 ITSN1Q15811 1721 aa13.02□□□□□ -0.33
RPRD1B-205ENST00000484683 NLRP6P59044 892 aa13.01□□□□□ -0.33
RPRD1B-205ENST00000484683 HDGFL2Q7Z4V5 671 aaPredicted RBP13.01□□□□□ -0.33
RPRD1B-205ENST00000484683 BTG4Q9NY30 223 aa13.01□□□□□ -0.33
RPRD1B-205ENST00000484683 BCL9LQ86UU0 1499 aa13□□□□□ -0.33
RPRD1B-205ENST00000484683 ATRNO75882 1429 aa13□□□□□ -0.33
RPRD1B-205ENST00000484683 ST20-MTHFSA0A0A6YYL1 179 aa13□□□□□ -0.33
RPRD1B-205ENST00000484683 A0A0G2JS52 829 aa13□□□□□ -0.33
RPRD1B-205ENST00000484683 EVA1CP58658 441 aa13□□□□□ -0.33
RPRD1B-205ENST00000484683 MYT1Q01538 1121 aa13□□□□□ -0.33
RPRD1B-205ENST00000484683 VPS72Q15906 364 aa13□□□□□ -0.33
RPRD1B-205ENST00000484683 CDCA8Q53HL2 280 aa13□□□□□ -0.33
RPRD1B-205ENST00000484683 PUS7Q96PZ0 661 aaKnown RBP13□□□□□ -0.33
RPRD1B-205ENST00000484683 TERF2IPQ9NYB0 399 aa13□□□□□ -0.33
RPRD1B-205ENST00000484683 QRICH2Q9H0J4 1663 aa12.99□□□□□ -0.33
RPRD1B-205ENST00000484683 ZC3H6P61129 1189 aaKnown RBP12.99□□□□□ -0.33
RPRD1B-205ENST00000484683 TMF1P82094 1093 aa12.99□□□□□ -0.33
RPRD1B-205ENST00000484683 SLIT2O94813 1529 aa12.98□□□□□ -0.33
RPRD1B-205ENST00000484683 GCP02774 474 aa12.98□□□□□ -0.33
RPRD1B-205ENST00000484683 USP6P35125 1406 aa12.97□□□□□ -0.33
RPRD1B-205ENST00000484683 KTN1Q86UP2 1357 aaKnown RBP12.97□□□□□ -0.33
RPRD1B-205ENST00000484683 TTC21AQ8NDW8 1320 aa12.97□□□□□ -0.33
RPRD1B-205ENST00000484683 KCNH5Q8NCM2 988 aa12.97□□□□□ -0.33
RPRD1B-205ENST00000484683 KIAA0232Q92628 1395 aa12.96□□□□□ -0.33
RPRD1B-205ENST00000484683 ZBTB7CA1YPR0 619 aa12.96□□□□□ -0.33
RPRD1B-205ENST00000484683 RGS12O14924 1447 aa12.96□□□□□ -0.34
RPRD1B-205ENST00000484683 USP47Q96K76 1375 aa12.95□□□□□ -0.34
RPRD1B-205ENST00000484683 TTC21BQ7Z4L5 1316 aa12.95□□□□□ -0.34
RPRD1B-205ENST00000484683 CHRNA2Q15822 529 aa12.95□□□□□ -0.34
RPRD1B-205ENST00000484683 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.349e-6■■■■□ 19.8
RPRD1B-205ENST00000484683 STRN4Q9NRL3 753 aa12.95□□□□□ -0.34
RPRD1B-205ENST00000484683 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
RPRD1B-205ENST00000484683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.94□□□□□ -0.34
RPRD1B-205ENST00000484683 SEPT12Q8IYM1 358 aa12.94□□□□□ -0.34
RPRD1B-205ENST00000484683 SLC12A5Q9H2X9 1139 aa12.94□□□□□ -0.34
RPRD1B-205ENST00000484683 TRPM3Q9HCF6 1732 aaPredicted RBP12.93□□□□□ -0.34
RPRD1B-205ENST00000484683 USP19O94966 1318 aa12.93□□□□□ -0.34
RPRD1B-205ENST00000484683 TOPAZ1Q8N9V7 1692 aa12.93□□□□□ -0.34
RPRD1B-205ENST00000484683 SF3B2Q13435 895 aaKnown RBP12.93□□□□□ -0.34
RPRD1B-205ENST00000484683 CCDC125Q86Z20 511 aa12.93□□□□□ -0.34
RPRD1B-205ENST00000484683 TESK2Q96S53 571 aa12.93□□□□□ -0.34
RPRD1B-205ENST00000484683 ALS2Q96Q42 1657 aa12.93□□□□□ -0.34
RPRD1B-205ENST00000484683 FAM98CQ17RN3 349 aaKnown RBP12.92□□□□□ -0.34
RPRD1B-205ENST00000484683 CPDO75976 1380 aa12.92□□□□□ -0.34
RPRD1B-205ENST00000484683 MARF1Q9Y4F3 1742 aaKnown RBP12.91□□□□□ -0.34
RPRD1B-205ENST00000484683 SOX12O15370 315 aa12.91□□□□□ -0.34
RPRD1B-205ENST00000484683 ONECUT3O60422 494 aaPredicted RBP12.91□□□□□ -0.34
RPRD1B-205ENST00000484683 USP35Q9P2H5 1018 aa12.91□□□□□ -0.34
RPRD1B-205ENST00000484683 SPATA31A5Q5VU36 1347 aa12.9□□□□□ -0.34
RPRD1B-205ENST00000484683 SPATA31A7Q8IWB4 1347 aa12.9□□□□□ -0.34
RPRD1B-205ENST00000484683 CPSF1Q10570 1443 aaKnown RBP12.9□□□□□ -0.34
RPRD1B-205ENST00000484683 EIF4G2P78344 907 aaKnown RBP eCLIP12.9□□□□□ -0.34
RPRD1B-205ENST00000484683 KRT27Q7Z3Y8 459 aa12.9□□□□□ -0.34
RPRD1B-205ENST00000484683 COL14A1Q05707 1796 aaKnown RBP12.89□□□□□ -0.35
RPRD1B-205ENST00000484683 CSB-PGBD3P0DP91 1061 aa12.89□□□□□ -0.35
RPRD1B-205ENST00000484683 SSH2Q76I76 1423 aa12.88□□□□□ -0.35
RPRD1B-205ENST00000484683 NWD2Q9ULI1 1742 aa12.88□□□□□ -0.35
RPRD1B-205ENST00000484683 TCP11L2Q8N4U5 519 aa12.88□□□□□ -0.35
RPRD1B-205ENST00000484683 THRAP3Q9Y2W1 955 aaKnown RBP12.88□□□□□ -0.35
RPRD1B-205ENST00000484683 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.88□□□□□ -0.35
RPRD1B-205ENST00000484683 EDC4Q6P2E9 1401 aaKnown RBP12.88□□□□□ -0.35
RPRD1B-205ENST00000484683 SPATA31A1Q5TZJ5 1347 aa12.88□□□□□ -0.35
RPRD1B-205ENST00000484683 AATKQ6ZMQ8 1374 aa12.87□□□□□ -0.35
RPRD1B-205ENST00000484683 PDE3BQ13370 1112 aa12.87□□□□□ -0.35
RPRD1B-205ENST00000484683 TOM1L2Q6ZVM7 507 aa12.87□□□□□ -0.35
RPRD1B-205ENST00000484683 COG3Q96JB2 828 aa12.87□□□□□ -0.35
RPRD1B-205ENST00000484683 POLR3GLQ9BT43 218 aa12.87□□□□□ -0.35
RPRD1B-205ENST00000484683 A0A1W2PP64 1363 aa12.86□□□□□ -0.35
RPRD1B-205ENST00000484683 LARP1Q6PKG0 1096 aaKnown RBP12.86□□□□□ -0.35
RPRD1B-205ENST00000484683 BARGINQ6ZT62 677 aa12.86□□□□□ -0.35
RPRD1B-205ENST00000484683 NME9Q86XW9 330 aa12.86□□□□□ -0.35
RPRD1B-205ENST00000484683 ABCA3Q99758 1704 aa12.85□□□□□ -0.35
RPRD1B-205ENST00000484683 ANKRD36BQ8N2N9 1353 aa12.85□□□□□ -0.35
RPRD1B-205ENST00000484683 ARHGEF25Q86VW2 580 aa12.85□□□□□ -0.35
RPRD1B-205ENST00000484683 PLCH1Q4KWH8 1693 aa12.85□□□□□ -0.35
RPRD1B-205ENST00000484683 USP31Q70CQ4 1352 aa12.84□□□□□ -0.35
RPRD1B-205ENST00000484683 C11orf95C9JLR9 678 aaPredicted RBP12.84□□□□□ -0.35
RPRD1B-205ENST00000484683 GLI3P10071 1580 aa12.83□□□□□ -0.36
RPRD1B-205ENST00000484683 CDCA7Q9BWT1 371 aaPredicted RBP12.83□□□□□ -0.36
RPRD1B-205ENST00000484683 NRKQ7Z2Y5 1582 aa12.82□□□□□ -0.36
RPRD1B-205ENST00000484683 CRB1P82279 1406 aa12.82□□□□□ -0.36
RPRD1B-205ENST00000484683 PHRF1Q9P1Y6 1649 aaKnown RBP12.82□□□□□ -0.36
RPRD1B-205ENST00000484683 FAM196AQ6ZSG2 479 aa12.82□□□□□ -0.36
RPRD1B-205ENST00000484683 WDR17Q8IZU2 1322 aa12.82□□□□□ -0.36
RPRD1B-205ENST00000484683 SLIT3O75094 1523 aa12.82□□□□□ -0.36
RPRD1B-205ENST00000484683 BLMP54132 1417 aaPredicted RBP12.81□□□□□ -0.36
RPRD1B-205ENST00000484683 CD163L1Q9NR16 1453 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms