RNA–Protein interactions for RNA: ENST00000484623.5

CCDC66-220, Transcript of coiled-coil domain containing 66, humanhuman

TSL 5

Gene CCDC66, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-220ENST00000484623 USTQ9Y2C2 406 aa12.75□□□□□ -0.37
CCDC66-220ENST00000484623 FBXO45P0C2W1 286 aa12.74□□□□□ -0.37
CCDC66-220ENST00000484623 CCNYL3P0C7X3 344 aa12.74□□□□□ -0.37
CCDC66-220ENST00000484623 CSB-PGBD3P0DP91 1061 aa12.74□□□□□ -0.37
CCDC66-220ENST00000484623 LMOD1P29536 600 aaPredicted RBP12.74□□□□□ -0.37
CCDC66-220ENST00000484623 CTHP32929 405 aa12.74□□□□□ -0.37
CCDC66-220ENST00000484623 ARMC2Q8NEN0 867 aa12.74□□□□□ -0.37
CCDC66-220ENST00000484623 ZNF592Q92610 1267 aa12.74□□□□□ -0.37
CCDC66-220ENST00000484623 DXOO77932 396 aaKnown RBP12.73□□□□□ -0.37
CCDC66-220ENST00000484623 NYAP1Q6ZVC0 841 aa12.73□□□□□ -0.37
CCDC66-220ENST00000484623 SPSB2Q99619 263 aa12.73□□□□□ -0.37
CCDC66-220ENST00000484623 TFIP11Q9UBB9 837 aaKnown RBP12.73□□□□□ -0.37
CCDC66-220ENST00000484623 AEBP1Q8IUX7 1158 aa12.72□□□□□ -0.37
CCDC66-220ENST00000484623 GPKOWQ92917 476 aaPredicted RBP eCLIP12.72□□□□□ -0.372e-9■■■■□ 21
CCDC66-220ENST00000484623 MAFBQ9Y5Q3 323 aaPredicted RBP12.72□□□□□ -0.37
CCDC66-220ENST00000484623 THSD4Q6ZMP0 1018 aa12.71□□□□□ -0.37
CCDC66-220ENST00000484623 NUDT12Q9BQG2 462 aa12.71□□□□□ -0.37
CCDC66-220ENST00000484623 ATP9BO43861 1147 aa12.7□□□□□ -0.38
CCDC66-220ENST00000484623 SRPK2P78362 688 aaKnown RBP12.7□□□□□ -0.38
CCDC66-220ENST00000484623 NBPF14Q5TI25 921 aa12.7□□□□□ -0.38
CCDC66-220ENST00000484623 CCDC9Q9Y3X0 531 aaKnown RBP12.7□□□□□ -0.38
CCDC66-220ENST00000484623 GPSM3Q9Y4H4 160 aa12.7□□□□□ -0.38
CCDC66-220ENST00000484623 PATL2C9JE40 543 aaKnown RBP12.69□□□□□ -0.38
CCDC66-220ENST00000484623 MMP16P51512 607 aa12.69□□□□□ -0.38
CCDC66-220ENST00000484623 COPS2P61201 443 aa12.69□□□□□ -0.38
CCDC66-220ENST00000484623 EVA1BQ9NVM1 165 aa12.69□□□□□ -0.38
CCDC66-220ENST00000484623 KCNH2Q12809 1159 aa12.68□□□□□ -0.38
CCDC66-220ENST00000484623 NFATC2IPQ8NCF5 419 aa12.68□□□□□ -0.38
CCDC66-220ENST00000484623 PTK2Q05397 1052 aa12.67□□□□□ -0.38
CCDC66-220ENST00000484623 TBC1D9Q6ZT07 1266 aa12.67□□□□□ -0.38
CCDC66-220ENST00000484623 FAM160A2Q8N612 972 aaPredicted RBP12.67□□□□□ -0.38
CCDC66-220ENST00000484623 MCCD1P59942 119 aaPredicted RBP12.66□□□□□ -0.38
CCDC66-220ENST00000484623 PDXDC2PQ6P474 469 aa12.66□□□□□ -0.38
CCDC66-220ENST00000484623 ATG7O95352 703 aa12.65□□□□□ -0.38
CCDC66-220ENST00000484623 ADH1BP00325 375 aa12.65□□□□□ -0.38
CCDC66-220ENST00000484623 KCTD12Q96CX2 325 aaKnown RBP12.64□□□□□ -0.39
CCDC66-220ENST00000484623 PRDM9Q9NQV7 894 aa12.64□□□□□ -0.39
CCDC66-220ENST00000484623 ZPR1O75312 459 aa12.63□□□□□ -0.39
CCDC66-220ENST00000484623 TLL1O43897 1013 aa12.61□□□□□ -0.39
CCDC66-220ENST00000484623 BRD1O95696 1058 aa12.61□□□□□ -0.39
CCDC66-220ENST00000484623 KRTAP3-3Q9BYR6 98 aa12.61□□□□□ -0.39
CCDC66-220ENST00000484623 KRTAP3-2Q9BYR7 98 aa12.61□□□□□ -0.39
CCDC66-220ENST00000484623 VRTNQ9H8Y1 702 aa12.61□□□□□ -0.39
CCDC66-220ENST00000484623 MTRQ99707 1265 aa12.6□□□□□ -0.39
CCDC66-220ENST00000484623 USP17L3A6NCW0 530 aa12.59□□□□□ -0.39
CCDC66-220ENST00000484623 USP17L4A6NCW7 530 aa12.59□□□□□ -0.39
CCDC66-220ENST00000484623 PIK3CDO00329 1044 aa12.59□□□□□ -0.39
CCDC66-220ENST00000484623 SKIP12755 728 aa12.59□□□□□ -0.39
CCDC66-220ENST00000484623 KCNA1Q09470 495 aa12.59□□□□□ -0.39
CCDC66-220ENST00000484623 SLFNL1Q499Z3 407 aa12.59□□□□□ -0.39
CCDC66-220ENST00000484623 USP17L2Q6R6M4 530 aa12.59□□□□□ -0.39
CCDC66-220ENST00000484623 USP17L1Q7RTZ2 530 aa12.59□□□□□ -0.39
CCDC66-220ENST00000484623 PLEKHM2Q8IWE5 1019 aa12.59□□□□□ -0.39
CCDC66-220ENST00000484623 PCDHB9Q9Y5E1 797 aa12.59□□□□□ -0.39
CCDC66-220ENST00000484623 USP17L5A8MUK1 530 aa12.58□□□□□ -0.4
CCDC66-220ENST00000484623 CDCA8Q53HL2 280 aa12.58□□□□□ -0.4
CCDC66-220ENST00000484623 ARHGAP9Q9BRR9 750 aa12.58□□□□□ -0.4
CCDC66-220ENST00000484623 CCDC24Q8N4L8 307 aa12.57□□□□□ -0.4
CCDC66-220ENST00000484623 SLC6A16Q9GZN6 736 aa12.57□□□□□ -0.4
CCDC66-220ENST00000484623 UNC93B1Q9H1C4 597 aa12.57□□□□□ -0.4
CCDC66-220ENST00000484623 IL21Q9HBE4 155 aa12.57□□□□□ -0.4
CCDC66-220ENST00000484623 CEP126Q9P2H0 1117 aa12.56□□□□□ -0.4
CCDC66-220ENST00000484623 MYT1LQ9UL68 1186 aa12.56□□□□□ -0.4
CCDC66-220ENST00000484623 ELOAQ14241 798 aaKnown RBP12.55□□□□□ -0.4
CCDC66-220ENST00000484623 ZBTB33Q86T24 672 aa12.55□□□□□ -0.4
CCDC66-220ENST00000484623 RNF135Q8IUD6 432 aa12.55□□□□□ -0.4
CCDC66-220ENST00000484623 KANK4Q5T7N3 995 aaPredicted RBP12.54□□□□□ -0.4
CCDC66-220ENST00000484623 ADAM32Q8TC27 787 aa12.54□□□□□ -0.4
CCDC66-220ENST00000484623 LZTS3O60299 673 aaPredicted RBP12.53□□□□□ -0.4
CCDC66-220ENST00000484623 B4GALNT3Q6L9W6 998 aa12.53□□□□□ -0.4
CCDC66-220ENST00000484623 SH3BP5LQ7L8J4 393 aa12.53□□□□□ -0.4
CCDC66-220ENST00000484623 FAM174AQ8TBP5 190 aa12.53□□□□□ -0.4
CCDC66-220ENST00000484623 OCSTAMPQ9BR26 566 aa12.53□□□□□ -0.4
CCDC66-220ENST00000484623 TMCO4Q5TGY1 634 aa12.52□□□□□ -0.41
CCDC66-220ENST00000484623 TMEM88BA6NKF7 163 aa12.51□□□□□ -0.41
CCDC66-220ENST00000484623 RANGAP1P46060 587 aaPredicted RBP12.51□□□□□ -0.41
CCDC66-220ENST00000484623 PTPN5P54829 565 aa12.51□□□□□ -0.41
CCDC66-220ENST00000484623 TJAP1Q5JTD0 557 aa12.51□□□□□ -0.41
CCDC66-220ENST00000484623 PLPP7Q8NBV4 271 aa12.51□□□□□ -0.41
CCDC66-220ENST00000484623 GZF1Q9H116 711 aaPredicted RBP12.51□□□□□ -0.41
CCDC66-220ENST00000484623 FAM196BA6NMK8 535 aa12.5□□□□□ -0.41
CCDC66-220ENST00000484623 MAP7D1Q3KQU3 841 aa12.5□□□□□ -0.41
CCDC66-220ENST00000484623 DZIP3Q86Y13 1208 aaKnown RBP12.5□□□□□ -0.41
CCDC66-220ENST00000484623 ATP5J2-PTCD1G3V325 749 aa12.49□□□□□ -0.41
CCDC66-220ENST00000484623 PTCRAQ6ISU1 281 aaPredicted RBP12.49□□□□□ -0.41
CCDC66-220ENST00000484623 DEPDC4Q8N2C3 294 aa12.49□□□□□ -0.41
CCDC66-220ENST00000484623 NOVA2Q9UNW9 492 aaKnown RBP12.49□□□□□ -0.41
CCDC66-220ENST00000484623 POTEMA6NI47 508 aa12.48□□□□□ -0.41
CCDC66-220ENST00000484623 NCOA4Q13772 614 aa12.48□□□□□ -0.41
CCDC66-220ENST00000484623 LARP1Q6PKG0 1096 aaKnown RBP12.48□□□□□ -0.41
CCDC66-220ENST00000484623 BPHLQ86WA6 291 aaPredicted RBP12.48□□□□□ -0.41
CCDC66-220ENST00000484623 ZNF516Q92618 1163 aa12.48□□□□□ -0.41
CCDC66-220ENST00000484623 MKRN1Q9UHC7 482 aaKnown RBP12.48□□□□□ -0.41
CCDC66-220ENST00000484623 MAGEB6P1A0A0J9YX57 407 aa12.47□□□□□ -0.41
CCDC66-220ENST00000484623 USP17L15C9J2P7 530 aa12.47□□□□□ -0.41
CCDC66-220ENST00000484623 USP17L10C9JJH3 530 aa12.47□□□□□ -0.41
CCDC66-220ENST00000484623 USP17L13C9JLJ4 530 aa12.47□□□□□ -0.41
CCDC66-220ENST00000484623 USP17L12C9JPN9 530 aa12.47□□□□□ -0.41
CCDC66-220ENST00000484623 USP17L11C9JVI0 530 aa12.47□□□□□ -0.41
CCDC66-220ENST00000484623 USP17L21D6R901 530 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms