RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 SKIV2LQ15477 1246 aaKnown RBP14.13□□□□□ -0.15
UBR3-210ENST00000484596 BAP1Q92560 729 aa14.13□□□□□ -0.15
UBR3-210ENST00000484596 J3QL48 77 aa14.12□□□□□ -0.15
UBR3-210ENST00000484596 SMPD1P17405 629 aa14.12□□□□□ -0.15
UBR3-210ENST00000484596 LINC01559Q495D7 138 aa14.12□□□□□ -0.15
UBR3-210ENST00000484596 ST8SIA5O15466 376 aa14.11□□□□□ -0.15
UBR3-210ENST00000484596 SH3D19Q5HYK7 790 aa14.11□□□□□ -0.15
UBR3-210ENST00000484596 AAASQ9NRG9 546 aa14.11□□□□□ -0.15
UBR3-210ENST00000484596 MAP10Q9P2G4 905 aa14.11□□□□□ -0.15
UBR3-210ENST00000484596 F12P00748 615 aaPredicted RBP14.1□□□□□ -0.15
UBR3-210ENST00000484596 AVPP01185 164 aa14.1□□□□□ -0.15
UBR3-210ENST00000484596 PROCA1Q8NCQ7 364 aaPredicted RBP14.1□□□□□ -0.15
UBR3-210ENST00000484596 EHBP1Q8NDI1 1231 aa14.09□□□□□ -0.15
UBR3-210ENST00000484596 ZNF511Q8NB15 262 aa14.08□□□□□ -0.16
UBR3-210ENST00000484596 SIAH2O43255 324 aa14.07□□□□□ -0.16
UBR3-210ENST00000484596 FBXO31Q5XUX0 539 aaPredicted RBP14.07□□□□□ -0.16
UBR3-210ENST00000484596 ZNF787Q6DD87 383 aa14.07□□□□□ -0.16
UBR3-210ENST00000484596 HELBQ8NG08 1087 aaPredicted RBP14.07□□□□□ -0.16
UBR3-210ENST00000484596 CRIPAKQ8N1N5 446 aa14.06□□□□□ -0.16
UBR3-210ENST00000484596 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.05□□□□□ -0.16
UBR3-210ENST00000484596 ATP1B4Q9UN42 357 aaPredicted RBP14.05□□□□□ -0.16
UBR3-210ENST00000484596 ALDH1A1P00352 501 aa14.04□□□□□ -0.16
UBR3-210ENST00000484596 POTECB2RU33 542 aa14.02□□□□□ -0.17
UBR3-210ENST00000484596 AXIN1O15169 862 aa14.02□□□□□ -0.17
UBR3-210ENST00000484596 CTDSPL2Q05D32 466 aa14.02□□□□□ -0.17
UBR3-210ENST00000484596 CTC1Q2NKJ3 1217 aa14.02□□□□□ -0.17
UBR3-210ENST00000484596 HPS1Q92902 700 aa14.02□□□□□ -0.17
UBR3-210ENST00000484596 DACH1Q9UI36 760 aa14.02□□□□□ -0.17
UBR3-210ENST00000484596 SMCPP49901 116 aaPredicted RBP14.01□□□□□ -0.17
UBR3-210ENST00000484596 PPP2R2DQ66LE6 453 aa13.99□□□□□ -0.17
UBR3-210ENST00000484596 FOXJ1Q92949 421 aa13.99□□□□□ -0.17
UBR3-210ENST00000484596 VARSP26640 1264 aaKnown RBP13.98□□□□□ -0.17
UBR3-210ENST00000484596 IL27Q8NEV9 243 aa13.98□□□□□ -0.17
UBR3-210ENST00000484596 TLL2Q9Y6L7 1015 aa13.96□□□□□ -0.17
UBR3-210ENST00000484596 ARMC2Q8NEN0 867 aa13.94□□□□□ -0.18
UBR3-210ENST00000484596 LRRN4Q8WUT4 740 aa13.94□□□□□ -0.18
UBR3-210ENST00000484596 WASF2Q9Y6W5 498 aa13.94□□□□□ -0.18
UBR3-210ENST00000484596 GOPCQ9HD26 462 aa13.93□□□□□ -0.18
UBR3-210ENST00000484596 AP1G2O75843 785 aa13.92□□□□□ -0.18
UBR3-210ENST00000484596 AGERQ15109 404 aa13.92□□□□□ -0.18
UBR3-210ENST00000484596 C4orf48Q5BLP8 95 aa13.92□□□□□ -0.18
UBR3-210ENST00000484596 MPNDQ8N594 471 aa13.92□□□□□ -0.18
UBR3-210ENST00000484596 FAM174AQ8TBP5 190 aa13.92□□□□□ -0.18
UBR3-210ENST00000484596 BPHLQ86WA6 291 aaPredicted RBP13.91□□□□□ -0.18
UBR3-210ENST00000484596 GMPR2Q9P2T1 348 aaKnown RBP13.9□□□□□ -0.18
UBR3-210ENST00000484596 NBPF14Q5TI25 921 aa13.89□□□□□ -0.19
UBR3-210ENST00000484596 PCMTD1Q96MG8 357 aaPredicted RBP13.89□□□□□ -0.19
UBR3-210ENST00000484596 ATP13A2Q9NQ11 1180 aa13.88□□□□□ -0.19
UBR3-210ENST00000484596 RFC5P40937 340 aa13.87□□□□□ -0.19
UBR3-210ENST00000484596 NR6A1Q15406 480 aa13.86□□□□□ -0.19
UBR3-210ENST00000484596 SH3BP5LQ7L8J4 393 aa13.86□□□□□ -0.19
UBR3-210ENST00000484596 SH3RF1Q7Z6J0 888 aa13.86□□□□□ -0.19
UBR3-210ENST00000484596 CDK15Q96Q40 435 aa13.86□□□□□ -0.19
UBR3-210ENST00000484596 ARID5BQ14865 1188 aa13.85□□□□□ -0.19
UBR3-210ENST00000484596 NNTQ13423 1086 aa13.84□□□□□ -0.19
UBR3-210ENST00000484596 ZNF775Q96BV0 537 aaPredicted RBP13.84□□□□□ -0.19
UBR3-210ENST00000484596 GTF3C3Q9Y5Q9 886 aa13.84□□□□□ -0.19
UBR3-210ENST00000484596 GPKOWQ92917 476 aaPredicted RBP eCLIP13.83□□□□□ -0.2
UBR3-210ENST00000484596 FKBPLQ9UIM3 349 aa13.83□□□□□ -0.2
UBR3-210ENST00000484596 MAGEB6P1A0A0J9YX57 407 aa13.82□□□□□ -0.2
UBR3-210ENST00000484596 C11orf95C9JLR9 678 aaPredicted RBP13.82□□□□□ -0.2
UBR3-210ENST00000484596 CAPN5O15484 640 aaPredicted RBP13.82□□□□□ -0.2
UBR3-210ENST00000484596 ADH1CP00326 375 aa13.82□□□□□ -0.2
UBR3-210ENST00000484596 USP17L8P0C7I0 530 aa13.82□□□□□ -0.2
UBR3-210ENST00000484596 C1QTNF2Q9BXJ5 285 aa13.82□□□□□ -0.2
UBR3-210ENST00000484596 EPS8L1Q8TE68 723 aa13.81□□□□□ -0.2
UBR3-210ENST00000484596 GRM5P41594 1212 aa13.8□□□□□ -0.2
UBR3-210ENST00000484596 HMX1Q9NP08 348 aaPredicted RBP13.8□□□□□ -0.2
UBR3-210ENST00000484596 PDXDC2PQ6P474 469 aa13.79□□□□□ -0.2
UBR3-210ENST00000484596 CARD14Q9BXL6 1004 aa13.79□□□□□ -0.2
UBR3-210ENST00000484596 TMEM259Q4ZIN3 620 aa13.77□□□□□ -0.21
UBR3-210ENST00000484596 BMP1P13497 986 aa13.76□□□□□ -0.21
UBR3-210ENST00000484596 WDR4P57081 412 aaKnown RBP13.76□□□□□ -0.21
UBR3-210ENST00000484596 NR5A1Q13285 461 aa13.76□□□□□ -0.21
UBR3-210ENST00000484596 TRMT44Q8IYL2 757 aaKnown RBP13.76□□□□□ -0.21
UBR3-210ENST00000484596 KLF16Q9BXK1 252 aaPredicted RBP13.76□□□□□ -0.21
UBR3-210ENST00000484596 SENP2Q9HC62 589 aa13.76□□□□□ -0.21
UBR3-210ENST00000484596 ZC3H4Q9UPT8 1303 aaKnown RBP13.75□□□□□ -0.21
UBR3-210ENST00000484596 NR3C2P08235 984 aa13.75□□□□□ -0.21
UBR3-210ENST00000484596 SNRPBP14678 240 aaKnown RBP13.75□□□□□ -0.21
UBR3-210ENST00000484596 TIMP2P16035 220 aa13.75□□□□□ -0.21
UBR3-210ENST00000484596 ERFEQ4G0M1 354 aa13.75□□□□□ -0.21
UBR3-210ENST00000484596 TRIM46Q7Z4K8 759 aa13.75□□□□□ -0.21
UBR3-210ENST00000484596 TRIM47Q96LD4 638 aa13.75□□□□□ -0.21
UBR3-210ENST00000484596 ARHGAP9Q9BRR9 750 aa13.75□□□□□ -0.21
UBR3-210ENST00000484596 VASH1Q7L8A9 365 aaPredicted RBP13.73□□□□□ -0.21
UBR3-210ENST00000484596 MAP4K5Q9Y4K4 846 aa13.73□□□□□ -0.21
UBR3-210ENST00000484596 OCSTAMPQ9BR26 566 aa13.72□□□□□ -0.21
UBR3-210ENST00000484596 ERICH6Q7L0X2 663 aa13.71□□□□□ -0.21
UBR3-210ENST00000484596 FSHRP23945 695 aa13.7□□□□□ -0.22
UBR3-210ENST00000484596 PTK2Q05397 1052 aa13.7□□□□□ -0.22
UBR3-210ENST00000484596 ZBTB33Q86T24 672 aa13.7□□□□□ -0.22
UBR3-210ENST00000484596 KIFC2Q96AC6 838 aa13.7□□□□□ -0.22
UBR3-210ENST00000484596 ITPKCQ96DU7 683 aa13.7□□□□□ -0.22
UBR3-210ENST00000484596 TRIM34Q9BYJ4 488 aa13.7□□□□□ -0.22
UBR3-210ENST00000484596 ZIC2O95409 532 aaPredicted RBP13.69□□□□□ -0.22
UBR3-210ENST00000484596 ZFAND3Q9H8U3 227 aa13.69□□□□□ -0.22
UBR3-210ENST00000484596 GPSM3Q9Y4H4 160 aa13.69□□□□□ -0.22
UBR3-210ENST00000484596 PNMA1Q8ND90 353 aa13.68□□□□□ -0.22
UBR3-210ENST00000484596 ADAM32Q8TC27 787 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms