RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 TMEM259Q4ZIN3 620 aa11.24□□□□□ -0.61
CCDC66-219ENST00000484441 LRRN4Q8WUT4 740 aa11.24□□□□□ -0.61
CCDC66-219ENST00000484441 AP1G2O75843 785 aa11.23□□□□□ -0.61
CCDC66-219ENST00000484441 ZNF511Q8NB15 262 aa11.23□□□□□ -0.61
CCDC66-219ENST00000484441 TNFRSF10AO00220 468 aa11.22□□□□□ -0.61
CCDC66-219ENST00000484441 BAP1Q92560 729 aa11.22□□□□□ -0.61
CCDC66-219ENST00000484441 TOR4AQ9NXH8 423 aa11.22□□□□□ -0.61
CCDC66-219ENST00000484441 FOXC1Q12948 553 aa11.21□□□□□ -0.61
CCDC66-219ENST00000484441 RC3H1Q5TC82 1133 aaKnown RBP11.21□□□□□ -0.61
CCDC66-219ENST00000484441 MRGPRX2Q96LB1 330 aa11.2□□□□□ -0.62
CCDC66-219ENST00000484441 HMX1Q9NP08 348 aaPredicted RBP11.2□□□□□ -0.62
CCDC66-219ENST00000484441 SOCS7O14512 581 aa11.19□□□□□ -0.62
CCDC66-219ENST00000484441 LINC01559Q495D7 138 aa11.19□□□□□ -0.62
CCDC66-219ENST00000484441 ARMC2Q8NEN0 867 aa11.19□□□□□ -0.62
CCDC66-219ENST00000484441 BANK1Q8NDB2 785 aa11.18□□□□□ -0.62
CCDC66-219ENST00000484441 SIAH2O43255 324 aa11.17□□□□□ -0.62
CCDC66-219ENST00000484441 GPKOWQ92917 476 aaPredicted RBP eCLIP11.17□□□□□ -0.62
CCDC66-219ENST00000484441 NR6A1Q15406 480 aa11.16□□□□□ -0.62
CCDC66-219ENST00000484441 NBPF14Q5TI25 921 aa11.16□□□□□ -0.62
CCDC66-219ENST00000484441 SH3RF1Q7Z6J0 888 aa11.16□□□□□ -0.62
CCDC66-219ENST00000484441 ZC3H4Q9UPT8 1303 aaKnown RBP11.15□□□□□ -0.62
CCDC66-219ENST00000484441 EHBP1Q8NDI1 1231 aa11.15□□□□□ -0.62
CCDC66-219ENST00000484441 SNIP1Q8TAD8 396 aaKnown RBP11.15□□□□□ -0.62
CCDC66-219ENST00000484441 TRIM34Q9BYJ4 488 aa11.15□□□□□ -0.62
CCDC66-219ENST00000484441 LCE2BO14633 110 aa11.14□□□□□ -0.63
CCDC66-219ENST00000484441 VARSP26640 1264 aaKnown RBP11.14□□□□□ -0.63
CCDC66-219ENST00000484441 SH3BP5LQ7L8J4 393 aa11.14□□□□□ -0.63
CCDC66-219ENST00000484441 CYP4X1Q8N118 509 aa11.14□□□□□ -0.63
CCDC66-219ENST00000484441 EPS8L1Q8TE68 723 aa11.14□□□□□ -0.63
CCDC66-219ENST00000484441 GJD4Q96KN9 370 aaPredicted RBP11.14□□□□□ -0.63
CCDC66-219ENST00000484441 FKBPLQ9UIM3 349 aa11.14□□□□□ -0.63
CCDC66-219ENST00000484441 DGAT1O75907 488 aa11.13□□□□□ -0.63
CCDC66-219ENST00000484441 C4orf48Q5BLP8 95 aa11.13□□□□□ -0.63
CCDC66-219ENST00000484441 MPNDQ8N594 471 aa11.13□□□□□ -0.63
CCDC66-219ENST00000484441 FOXJ1Q92949 421 aa11.13□□□□□ -0.63
CCDC66-219ENST00000484441 Q6ZNB5 142 aa11.12□□□□□ -0.63
CCDC66-219ENST00000484441 TMEM132AQ24JP5 1023 aa11.11□□□□□ -0.63
CCDC66-219ENST00000484441 PDXDC2PQ6P474 469 aa11.11□□□□□ -0.63
CCDC66-219ENST00000484441 BPHLQ86WA6 291 aaPredicted RBP11.11□□□□□ -0.63
CCDC66-219ENST00000484441 C1QTNF2Q9BXJ5 285 aa11.11□□□□□ -0.63
CCDC66-219ENST00000484441 FAM187AA6NFU0 413 aa11.1□□□□□ -0.63
CCDC66-219ENST00000484441 AVPP01185 164 aa11.1□□□□□ -0.63
CCDC66-219ENST00000484441 SMPD1P17405 629 aa11.1□□□□□ -0.63
CCDC66-219ENST00000484441 MTMR14Q8NCE2 650 aa11.1□□□□□ -0.63
CCDC66-219ENST00000484441 TTC24A2A3L6 582 aaPredicted RBP11.09□□□□□ -0.63
CCDC66-219ENST00000484441 PKDCCQ504Y2 493 aa11.08□□□□□ -0.64
CCDC66-219ENST00000484441 GPSM3Q9Y4H4 160 aa11.08□□□□□ -0.64
CCDC66-219ENST00000484441 J3QL48 77 aa11.07□□□□□ -0.64
CCDC66-219ENST00000484441 GPR37L1O60883 481 aa11.07□□□□□ -0.64
CCDC66-219ENST00000484441 TRMT44Q8IYL2 757 aaKnown RBP11.07□□□□□ -0.64
CCDC66-219ENST00000484441 FAM174AQ8TBP5 190 aa11.07□□□□□ -0.64
CCDC66-219ENST00000484441 OCSTAMPQ9BR26 566 aa11.07□□□□□ -0.64
CCDC66-219ENST00000484441 SNRKQ9NRH2 765 aa11.07□□□□□ -0.64
CCDC66-219ENST00000484441 TLL2Q9Y6L7 1015 aa11.07□□□□□ -0.64
CCDC66-219ENST00000484441 CRIPAKQ8N1N5 446 aa11.06□□□□□ -0.64
CCDC66-219ENST00000484441 PNMA1Q8ND90 353 aa11.06□□□□□ -0.64
CCDC66-219ENST00000484441 CDK15Q96Q40 435 aa11.06□□□□□ -0.64
CCDC66-219ENST00000484441 MYT1Q01538 1121 aa11.05□□□□□ -0.64
CCDC66-219ENST00000484441 TRAF7Q6Q0C0 670 aa11.05□□□□□ -0.64
CCDC66-219ENST00000484441 ALDH1A1P00352 501 aa11.04□□□□□ -0.64
CCDC66-219ENST00000484441 SMCPP49901 116 aaPredicted RBP11.03□□□□□ -0.64
CCDC66-219ENST00000484441 AGERQ15109 404 aa11.03□□□□□ -0.64
CCDC66-219ENST00000484441 MAP4K5Q9Y4K4 846 aa11.03□□□□□ -0.64
CCDC66-219ENST00000484441 APBB1O00213 710 aa11.02□□□□□ -0.65
CCDC66-219ENST00000484441 ERFEQ4G0M1 354 aa11.02□□□□□ -0.65
CCDC66-219ENST00000484441 ARHGAP9Q9BRR9 750 aa11.02□□□□□ -0.65
CCDC66-219ENST00000484441 PTK2Q05397 1052 aa11.01□□□□□ -0.65
CCDC66-219ENST00000484441 CTC1Q2NKJ3 1217 aa11.01□□□□□ -0.65
CCDC66-219ENST00000484441 NDUFB9Q9Y6M9 179 aa11.01□□□□□ -0.65
CCDC66-219ENST00000484441 MAGEB6P1A0A0J9YX57 407 aa11□□□□□ -0.65
CCDC66-219ENST00000484441 ADH1CP00326 375 aa11□□□□□ -0.65
CCDC66-219ENST00000484441 MCM6Q14566 821 aa11□□□□□ -0.65
CCDC66-219ENST00000484441 HPS1Q92902 700 aa11□□□□□ -0.65
CCDC66-219ENST00000484441 CARD14Q9BXL6 1004 aa10.99□□□□□ -0.65
CCDC66-219ENST00000484441 AAASQ9NRG9 546 aa10.99□□□□□ -0.65
CCDC66-219ENST00000484441 GRM5P41594 1212 aa10.98□□□□□ -0.65
CCDC66-219ENST00000484441 WASF2Q9Y6W5 498 aa10.98□□□□□ -0.65
CCDC66-219ENST00000484441 ADAM32Q8TC27 787 aa10.97□□□□□ -0.65
CCDC66-219ENST00000484441 ZBTB33Q86T24 672 aa10.96□□□□□ -0.65
CCDC66-219ENST00000484441 CDV3Q9UKY7 258 aaKnown RBP10.96□□□□□ -0.65
CCDC66-219ENST00000484441 ZBBXA8MT70 800 aa10.95□□□□□ -0.66
CCDC66-219ENST00000484441 ST8SIA5O15466 376 aa10.95□□□□□ -0.66
CCDC66-219ENST00000484441 FBXO45P0C2W1 286 aa10.95□□□□□ -0.66
CCDC66-219ENST00000484441 NR5A1Q13285 461 aa10.95□□□□□ -0.66
CCDC66-219ENST00000484441 NNTQ13423 1086 aa10.95□□□□□ -0.66
CCDC66-219ENST00000484441 KLF16Q9BXK1 252 aaPredicted RBP10.95□□□□□ -0.66
CCDC66-219ENST00000484441 AXIN1O15169 862 aa10.94□□□□□ -0.66
CCDC66-219ENST00000484441 SLC10A4Q96EP9 437 aa10.94□□□□□ -0.66
CCDC66-219ENST00000484441 NR3C2P08235 984 aa10.93□□□□□ -0.66
CCDC66-219ENST00000484441 ARID5BQ14865 1188 aa10.93□□□□□ -0.66
CCDC66-219ENST00000484441 VASH1Q7L8A9 365 aaPredicted RBP10.93□□□□□ -0.66
CCDC66-219ENST00000484441 TBC1D2BQ9UPU7 963 aa10.93□□□□□ -0.66
CCDC66-219ENST00000484441 FSHRP23945 695 aa10.91□□□□□ -0.66
CCDC66-219ENST00000484441 NR1H3Q13133 447 aa10.91□□□□□ -0.66
CCDC66-219ENST00000484441 TIMP2P16035 220 aa10.9□□□□□ -0.66
CCDC66-219ENST00000484441 FLIIQ13045 1269 aa10.89□□□□□ -0.67
CCDC66-219ENST00000484441 IRF5Q13568 498 aa10.89□□□□□ -0.67
CCDC66-219ENST00000484441 KCTD15Q96SI1 283 aaPredicted RBP10.89□□□□□ -0.67
CCDC66-219ENST00000484441 PRM3Q9NNZ6 103 aa10.89□□□□□ -0.67
CCDC66-219ENST00000484441 DACH1Q9UI36 760 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms