RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 SBNO1A3KN83 1393 aa8.92□□□□□ -0.98
NCL-209ENST00000484328 NPHP3Q7Z494 1330 aa8.92□□□□□ -0.98
NCL-209ENST00000484328 SLC12A5Q9H2X9 1139 aa8.92□□□□□ -0.98
NCL-209ENST00000484328 SLIT3O75094 1523 aa8.91□□□□□ -0.98
NCL-209ENST00000484328 OVOS2A0A0J9YW53 1432 aa8.91□□□□□ -0.98
NCL-209ENST00000484328 TNS3Q68CZ2 1445 aa8.91□□□□□ -0.98
NCL-209ENST00000484328 OVOS2Q6IE36 1432 aa8.91□□□□□ -0.98
NCL-209ENST00000484328 NSD3Q9BZ95 1437 aa8.91□□□□□ -0.98
NCL-209ENST00000484328 KTN1Q86UP2 1357 aaKnown RBP8.91□□□□□ -0.98
NCL-209ENST00000484328 PMFBP1Q8TBY8 1022 aa8.91□□□□□ -0.98
NCL-209ENST00000484328 FOXO3O43524 673 aa8.9□□□□□ -0.98
NCL-209ENST00000484328 ZNF692Q9BU19 519 aaPredicted RBP8.9□□□□□ -0.98
NCL-209ENST00000484328 CARD14Q9BXL6 1004 aa8.9□□□□□ -0.98
NCL-209ENST00000484328 TERF2IPQ9NYB0 399 aa8.9□□□□□ -0.98
NCL-209ENST00000484328 HDGFL2Q7Z4V5 671 aaPredicted RBP8.89□□□□□ -0.99
NCL-209ENST00000484328 NGDNQ8NEJ9 315 aaKnown RBP8.89□□□□□ -0.99
NCL-209ENST00000484328 TMC1Q8TDI8 760 aa8.89□□□□□ -0.99
NCL-209ENST00000484328 ARHGEF10O15013 1369 aa8.88□□□□□ -0.99
NCL-209ENST00000484328 NSD2O96028 1365 aa8.88□□□□□ -0.99
NCL-209ENST00000484328 USP31Q70CQ4 1352 aa8.88□□□□□ -0.99
NCL-209ENST00000484328 NPC1L1Q9UHC9 1359 aa8.88□□□□□ -0.99
NCL-209ENST00000484328 SPATA31A3Q5VYP0 1347 aa8.88□□□□□ -0.99
NCL-209ENST00000484328 TTC21AQ8NDW8 1320 aa8.88□□□□□ -0.99
NCL-209ENST00000484328 PER1O15534 1290 aaPredicted RBP8.88□□□□□ -0.99
NCL-209ENST00000484328 FBXO41Q8TF61 875 aa8.88□□□□□ -0.99
NCL-209ENST00000484328 DDX17Q92841 729 aaKnown RBP8.88□□□□□ -0.99
NCL-209ENST00000484328 NFAT5O94916 1531 aa8.88□□□□□ -0.99
NCL-209ENST00000484328 PNPLA6Q8IY17 1366 aa8.87□□□□□ -0.99
NCL-209ENST00000484328 TTC21BQ7Z4L5 1316 aa8.87□□□□□ -0.99
NCL-209ENST00000484328 PIP4K2BP78356 416 aa8.87□□□□□ -0.99
NCL-209ENST00000484328 KRT28Q7Z3Y7 464 aa8.87□□□□□ -0.99
NCL-209ENST00000484328 POLR3GLQ9BT43 218 aa8.87□□□□□ -0.99
NCL-209ENST00000484328 PANK3Q9H999 370 aa8.87□□□□□ -0.99
NCL-209ENST00000484328 LTN1O94822 1766 aa8.86□□□□□ -0.99
NCL-209ENST00000484328 USP19O94966 1318 aa8.86□□□□□ -0.99
NCL-209ENST00000484328 ABCC6O95255 1503 aa8.86□□□□□ -0.99
NCL-209ENST00000484328 XPCQ01831 940 aaPredicted RBP8.86□□□□□ -0.99
NCL-209ENST00000484328 PSME1Q06323 249 aa8.86□□□□□ -0.99
NCL-209ENST00000484328 CGNL1Q0VF96 1302 aa8.85□□□□□ -0.99
NCL-209ENST00000484328 LMO7Q8WWI1 1683 aa8.85□□□□□ -0.99
NCL-209ENST00000484328 AMER1Q5JTC6 1135 aaPredicted RBP8.85□□□□□ -0.99
NCL-209ENST00000484328 JCADQ9P266 1359 aa8.85□□□□□ -0.99
NCL-209ENST00000484328 SCAF1Q9H7N4 1312 aaKnown RBP8.84□□□□□ -0.99
NCL-209ENST00000484328 SMG6Q86US8 1419 aaKnown RBP8.84□□□□□ -0.99
NCL-209ENST00000484328 LRRC59Q96AG4 307 aaKnown RBP8.84□□□□□ -0.99
NCL-209ENST00000484328 PEAK1Q9H792 1746 aa8.84□□□□□ -0.99
NCL-209ENST00000484328 PLCH1Q4KWH8 1693 aa8.84□□□□□ -0.99
NCL-209ENST00000484328 COL18A1P39060 1754 aa8.84□□□□□ -1
NCL-209ENST00000484328 LRP6O75581 1613 aa8.83□□□□□ -1
NCL-209ENST00000484328 FYB1O15117 783 aa8.83□□□□□ -1
NCL-209ENST00000484328 HSPA1LP34931 641 aa8.83□□□□□ -1
NCL-209ENST00000484328 DDX10Q13206 875 aaKnown RBP8.83□□□□□ -1
NCL-209ENST00000484328 NME9Q86XW9 330 aa8.83□□□□□ -1
NCL-209ENST00000484328 PARD3Q8TEW0 1356 aa8.83□□□□□ -1
NCL-209ENST00000484328 NRAPQ86VF7 1730 aa8.83□□□□□ -1
NCL-209ENST00000484328 NWD2Q9ULI1 1742 aa8.83□□□□□ -1
NCL-209ENST00000484328 COL14A1Q05707 1796 aaKnown RBP8.82□□□□□ -1
NCL-209ENST00000484328 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.82□□□□□ -1
NCL-209ENST00000484328 KNSTRNQ9Y448 316 aa8.82□□□□□ -1
NCL-209ENST00000484328 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.82□□□□□ -1
NCL-209ENST00000484328 MAP2P11137 1827 aaKnown RBP8.82□□□□□ -1
NCL-209ENST00000484328 FAM208AQ9UK61 1670 aaKnown RBP8.81□□□□□ -1
NCL-209ENST00000484328 ABTB2Q8N961 1025 aa8.81□□□□□ -1
NCL-209ENST00000484328 CPDO75976 1380 aa8.81□□□□□ -1
NCL-209ENST00000484328 AATKQ6ZMQ8 1374 aa8.81□□□□□ -1
NCL-209ENST00000484328 CAMTA1Q9Y6Y1 1673 aa8.81□□□□□ -1
NCL-209ENST00000484328 SPATA31A6Q5VVP1 1343 aa8.8□□□□□ -1
NCL-209ENST00000484328 PAK3O75914 559 aaPredicted RBP8.8□□□□□ -1
NCL-209ENST00000484328 NLRP13Q86W25 1043 aa8.8□□□□□ -1
NCL-209ENST00000484328 GGNBP2Q9H3C7 697 aa8.8□□□□□ -1
NCL-209ENST00000484328 ZRANB1Q9UGI0 708 aa8.8□□□□□ -1
NCL-209ENST00000484328 CDK12Q9NYV4 1490 aaPredicted RBP8.8□□□□□ -1
NCL-209ENST00000484328 RGPD5Q99666 1765 aa8.79□□□□□ -1
NCL-209ENST00000484328 RTL1A6NKG5 1358 aa8.79□□□□□ -1
NCL-209ENST00000484328 KIF24Q5T7B8 1368 aa8.79□□□□□ -1
NCL-209ENST00000484328 NLRP6P59044 892 aa8.79□□□□□ -1
NCL-209ENST00000484328 COG3Q96JB2 828 aa8.79□□□□□ -1
NCL-209ENST00000484328 RGPD1P0DJD0 1748 aa8.79□□□□□ -1
NCL-209ENST00000484328 COL3A1P02461 1466 aaPredicted RBP8.78□□□□□ -1
NCL-209ENST00000484328 WNK3Q9BYP7 1800 aa8.77□□□□□ -1
NCL-209ENST00000484328 GCP02774 474 aa8.77□□□□□ -1.01
NCL-209ENST00000484328 NUTM2GQ5VZR2 741 aa8.77□□□□□ -1.01
NCL-209ENST00000484328 KCNH5Q8NCM2 988 aa8.77□□□□□ -1.01
NCL-209ENST00000484328 BLMP54132 1417 aaPredicted RBP8.77□□□□□ -1.01
NCL-209ENST00000484328 KIAA0232Q92628 1395 aa8.76□□□□□ -1.01
NCL-209ENST00000484328 SLIT2O94813 1529 aa8.76□□□□□ -1.01
NCL-209ENST00000484328 CC2D1BQ5T0F9 858 aaKnown RBP8.76□□□□□ -1.01
NCL-209ENST00000484328 LMOD2Q6P5Q4 547 aa8.76□□□□□ -1.01
NCL-209ENST00000484328 CABLES1Q8TDN4 633 aa8.76□□□□□ -1.01
NCL-209ENST00000484328 PRKRIP1Q9H875 184 aaPredicted RBP8.76□□□□□ -1.01
NCL-209ENST00000484328 MAP3K19Q56UN5 1328 aa8.76□□□□□ -1.01
NCL-209ENST00000484328 COL5A2P05997 1499 aaPredicted RBP8.76□□□□□ -1.01
NCL-209ENST00000484328 INSRP06213 1382 aa8.75□□□□□ -1.01
NCL-209ENST00000484328 FLT4P35916 1363 aa8.75□□□□□ -1.01
NCL-209ENST00000484328 RALBP1Q15311 655 aa8.75□□□□□ -1.01
NCL-209ENST00000484328 MORC1Q86VD1 984 aa8.75□□□□□ -1.01
NCL-209ENST00000484328 ARHGEF25Q86VW2 580 aa8.75□□□□□ -1.01
NCL-209ENST00000484328 RGPD2P0DJD1 1756 aa8.74□□□□□ -1.01
NCL-209ENST00000484328 NCAPD2Q15021 1401 aa8.74□□□□□ -1.01
NCL-209ENST00000484328 POLKQ9UBT6 870 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms