RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 CTHP32929 405 aa11.34□□□□□ -0.59
SCAF11-207ENST00000484275 TUSC1Q2TAM9 212 aa11.34□□□□□ -0.59
SCAF11-207ENST00000484275 ATP13A2Q9NQ11 1180 aa11.34□□□□□ -0.59
SCAF11-207ENST00000484275 C11orf95C9JLR9 678 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-207ENST00000484275 RTL5Q5HYW3 569 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-207ENST00000484275 TLL2Q9Y6L7 1015 aa11.32□□□□□ -0.6
SCAF11-207ENST00000484275 NUTM2BA6NNL0 878 aaPredicted RBP11.31□□□□□ -0.6
SCAF11-207ENST00000484275 NUTM2EB1AL46 878 aaPredicted RBP11.31□□□□□ -0.6
SCAF11-207ENST00000484275 CLK2P49760 499 aaKnown RBP11.31□□□□□ -0.6
SCAF11-207ENST00000484275 NUTM2DQ5VT03 806 aaPredicted RBP11.31□□□□□ -0.6
SCAF11-207ENST00000484275 NUTM2AQ8IVF1 878 aaPredicted RBP11.31□□□□□ -0.6
SCAF11-207ENST00000484275 BCANQ96GW7 911 aa11.31□□□□□ -0.6
SCAF11-207ENST00000484275 GPBP1L1Q9HC44 474 aaPredicted RBP11.31□□□□□ -0.6
SCAF11-207ENST00000484275 POLR3EQ9NVU0 708 aa11.31□□□□□ -0.6
SCAF11-207ENST00000484275 TSC1Q92574 1164 aa11.3□□□□□ -0.6
SCAF11-207ENST00000484275 SLC24A1O60721 1099 aa11.28□□□□□ -0.6
SCAF11-207ENST00000484275 SNRPBP14678 240 aaKnown RBP11.28□□□□□ -0.6
SCAF11-207ENST00000484275 FBXO31Q5XUX0 539 aaPredicted RBP11.28□□□□□ -0.6
SCAF11-207ENST00000484275 FOXJ1Q92949 421 aa11.28□□□□□ -0.6
SCAF11-207ENST00000484275 WASF2Q9Y6W5 498 aa11.28□□□□□ -0.6
SCAF11-207ENST00000484275 VARSP26640 1264 aaKnown RBP11.27□□□□□ -0.61
SCAF11-207ENST00000484275 LCE2AQ5TA79 106 aaPredicted RBP11.27□□□□□ -0.61
SCAF11-207ENST00000484275 KDM4CQ9H3R0 1056 aa11.27□□□□□ -0.61
SCAF11-207ENST00000484275 C4orf48Q5BLP8 95 aa11.26□□□□□ -0.61
SCAF11-207ENST00000484275 RSPH6AQ9H0K4 717 aa11.26□□□□□ -0.61
SCAF11-207ENST00000484275 TRIM47Q96LD4 638 aa11.25□□□□□ -0.61
SCAF11-207ENST00000484275 FAM117AQ9C073 453 aa11.25□□□□□ -0.61
SCAF11-207ENST00000484275 MPNDQ8N594 471 aa11.24□□□□□ -0.61
SCAF11-207ENST00000484275 BMP1P13497 986 aa11.23□□□□□ -0.61
SCAF11-207ENST00000484275 TREML4Q6UXN2 200 aa11.23□□□□□ -0.61
SCAF11-207ENST00000484275 TRIM46Q7Z4K8 759 aa11.23□□□□□ -0.61
SCAF11-207ENST00000484275 CAPN5O15484 640 aaPredicted RBP11.22□□□□□ -0.61
SCAF11-207ENST00000484275 NNTQ13423 1086 aa11.22□□□□□ -0.61
SCAF11-207ENST00000484275 PROCA1Q8NCQ7 364 aaPredicted RBP11.22□□□□□ -0.61
SCAF11-207ENST00000484275 PLEKHG3A1L390 1219 aa11.21□□□□□ -0.61
SCAF11-207ENST00000484275 HELBQ8NG08 1087 aaPredicted RBP11.21□□□□□ -0.61
SCAF11-207ENST00000484275 CTDSPL2Q05D32 466 aa11.2□□□□□ -0.62
SCAF11-207ENST00000484275 FAM174AQ8TBP5 190 aa11.2□□□□□ -0.62
SCAF11-207ENST00000484275 SENP2Q9HC62 589 aa11.2□□□□□ -0.62
SCAF11-207ENST00000484275 SKIV2LQ15477 1246 aaKnown RBP11.19□□□□□ -0.62
SCAF11-207ENST00000484275 SH3D19Q5HYK7 790 aa11.19□□□□□ -0.62
SCAF11-207ENST00000484275 CDK15Q96Q40 435 aa11.19□□□□□ -0.62
SCAF11-207ENST00000484275 SH3RF1Q7Z6J0 888 aa11.18□□□□□ -0.62
SCAF11-207ENST00000484275 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.18□□□□□ -0.62
SCAF11-207ENST00000484275 KLF16Q9BXK1 252 aaPredicted RBP11.18□□□□□ -0.62
SCAF11-207ENST00000484275 ADH1CP00326 375 aa11.17□□□□□ -0.62
SCAF11-207ENST00000484275 NFX1Q12986 1120 aaKnown RBP11.17□□□□□ -0.62
SCAF11-207ENST00000484275 AGERQ15109 404 aa11.17□□□□□ -0.62
SCAF11-207ENST00000484275 TIMP2P16035 220 aa11.16□□□□□ -0.62
SCAF11-207ENST00000484275 ARID5BQ14865 1188 aa11.16□□□□□ -0.62
SCAF11-207ENST00000484275 LCE2CQ5TA81 110 aa11.16□□□□□ -0.62
SCAF11-207ENST00000484275 BPHLQ86WA6 291 aaPredicted RBP11.16□□□□□ -0.62
SCAF11-207ENST00000484275 KIFC2Q96AC6 838 aa11.16□□□□□ -0.62
SCAF11-207ENST00000484275 DDRGK1Q96HY6 314 aa11.16□□□□□ -0.62
SCAF11-207ENST00000484275 NR3C2P08235 984 aa11.15□□□□□ -0.62
SCAF11-207ENST00000484275 GRM5P41594 1212 aa11.15□□□□□ -0.62
SCAF11-207ENST00000484275 SH3BP5LQ7L8J4 393 aa11.15□□□□□ -0.62
SCAF11-207ENST00000484275 LRRN4Q8WUT4 740 aa11.15□□□□□ -0.62
SCAF11-207ENST00000484275 C1QTNF2Q9BXJ5 285 aa11.15□□□□□ -0.62
SCAF11-207ENST00000484275 WFS1O76024 890 aa11.14□□□□□ -0.63
SCAF11-207ENST00000484275 WDR4P57081 412 aaKnown RBP11.14□□□□□ -0.63
SCAF11-207ENST00000484275 ARMC2Q8NEN0 867 aa11.14□□□□□ -0.63
SCAF11-207ENST00000484275 PPP2R2DQ66LE6 453 aa11.13□□□□□ -0.63
SCAF11-207ENST00000484275 NBPF14Q5TI25 921 aa11.12□□□□□ -0.63
SCAF11-207ENST00000484275 ZFP42Q96MM3 310 aa11.12□□□□□ -0.63
SCAF11-207ENST00000484275 ZFAND3Q9H8U3 227 aa11.11□□□□□ -0.63
SCAF11-207ENST00000484275 TERTO14746 1132 aaKnown RBP11.1□□□□□ -0.63
SCAF11-207ENST00000484275 ITPKCQ96DU7 683 aa11.1□□□□□ -0.63
SCAF11-207ENST00000484275 MAGEB6P1A0A0J9YX57 407 aa11.09□□□□□ -0.63
SCAF11-207ENST00000484275 NR5A1Q13285 461 aa11.09□□□□□ -0.63
SCAF11-207ENST00000484275 NR6A1Q15406 480 aa11.09□□□□□ -0.63
SCAF11-207ENST00000484275 MRPL14Q6P1L8 145 aaKnown RBP11.08□□□□□ -0.64
SCAF11-207ENST00000484275 TRMT44Q8IYL2 757 aaKnown RBP11.08□□□□□ -0.64
SCAF11-207ENST00000484275 ZIC2O95409 532 aaPredicted RBP11.07□□□□□ -0.64
SCAF11-207ENST00000484275 PURBQ96QR8 312 aaKnown RBP11.07□□□□□ -0.64
SCAF11-207ENST00000484275 CARD14Q9BXL6 1004 aa11.07□□□□□ -0.64
SCAF11-207ENST00000484275 AP1G2O75843 785 aa11.06□□□□□ -0.64
SCAF11-207ENST00000484275 FSHRP23945 695 aa11.06□□□□□ -0.64
SCAF11-207ENST00000484275 ERFEQ4G0M1 354 aa11.06□□□□□ -0.64
SCAF11-207ENST00000484275 EPS8L1Q8TE68 723 aa11.06□□□□□ -0.64
SCAF11-207ENST00000484275 GPKOWQ92917 476 aaPredicted RBP eCLIP11.06□□□□□ -0.646e-10■■■□□ 19
SCAF11-207ENST00000484275 FKBPLQ9UIM3 349 aa11.06□□□□□ -0.64
SCAF11-207ENST00000484275 ATP1B4Q9UN42 357 aaPredicted RBP11.06□□□□□ -0.64
SCAF11-207ENST00000484275 MAP4K5Q9Y4K4 846 aa11.06□□□□□ -0.64
SCAF11-207ENST00000484275 OCSTAMPQ9BR26 566 aa11.05□□□□□ -0.64
SCAF11-207ENST00000484275 PDXDC2PQ6P474 469 aa11.04□□□□□ -0.64
SCAF11-207ENST00000484275 VASH1Q7L8A9 365 aaPredicted RBP11.04□□□□□ -0.64
SCAF11-207ENST00000484275 HMX1Q9NP08 348 aaPredicted RBP11.04□□□□□ -0.64
SCAF11-207ENST00000484275 SOBPA7XYQ1 873 aa11.02□□□□□ -0.65
SCAF11-207ENST00000484275 NXF1Q9UBU9 619 aaKnown RBP11.02□□□□□ -0.65
SCAF11-207ENST00000484275 WIPF1O43516 503 aa11.01□□□□□ -0.65
SCAF11-207ENST00000484275 RFC5P40937 340 aa11.01□□□□□ -0.65
SCAF11-207ENST00000484275 VEGFBP49765 207 aa11.01□□□□□ -0.65
SCAF11-207ENST00000484275 SCARF1Q14162 830 aa11.01□□□□□ -0.65
SCAF11-207ENST00000484275 ARHGAP9Q9BRR9 750 aa11.01□□□□□ -0.65
SCAF11-207ENST00000484275 USP17L8P0C7I0 530 aa11□□□□□ -0.65
SCAF11-207ENST00000484275 NEUROD2Q15784 382 aa11□□□□□ -0.65
SCAF11-207ENST00000484275 C6orf118Q5T5N4 469 aa10.99□□□□□ -0.65
SCAF11-207ENST00000484275 MEIOBQ8N635 442 aa10.99□□□□□ -0.65
SCAF11-207ENST00000484275 CCDC116Q8IYX3 515 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms